BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00027807
         (384 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN63667.1| hypothetical protein VITISV_013184 [Vitis vinifera]    55   7e-08
gb|EAZ18911.1| hypothetical protein OsJ_34451 [Oryza sativa Japo...    52   2e-06
ref|NP_001068214.2| Os11g0598000 [Oryza sativa Japonica Group] g...    52   2e-06
ref|XP_003616648.1| F-box protein SKIP23 [Medicago truncatula] g...    51   4e-06
gb|EAY80873.1| hypothetical protein OsI_36047 [Oryza sativa Indi...    50   5e-06

>emb|CAN63667.1| hypothetical protein VITISV_013184 [Vitis vinifera]
          Length = 530

 Score = 55.5 bits (132), Expect(2) = 7e-08
 Identities = 36/89 (40%), Positives = 48/89 (53%)
 Frame = -1

Query: 267 ARSLYSLSLKRPYNFPVPVPHNRFCVGSSHGWLATVLESYEVRLLNPFLPPPSNEIHLPP 88
           +RS YS++ ++   F +PVP      GSSHGWL T  E+  V LL+PF       I LPP
Sbjct: 202 SRSFYSITHQKLSKFHLPVPPGTRYCGSSHGWLITTDETNAVSLLHPF---SRQVIRLPP 258

Query: 87  LTAFAKGSVTGESIQHLGYIRKIVLSANP 1
           LT       T    ++  ++ K VLSANP
Sbjct: 259 LTRLKIPQRTVYGFEY--HLHKGVLSANP 285



 Score = 25.8 bits (55), Expect(2) = 7e-08
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = -2

Query: 383 RFGAVCRSWRSFYIKNIR 330
           RFGAVC  W S  +K+ +
Sbjct: 156 RFGAVCTPWHSLAVKSFQ 173


>gb|EAZ18911.1| hypothetical protein OsJ_34451 [Oryza sativa Japonica Group]
          Length = 347

 Score = 51.6 bits (122), Expect(2) = 2e-06
 Identities = 29/72 (40%), Positives = 41/72 (56%), Gaps = 2/72 (2%)
 Frame = -1

Query: 270 KARSLYSLSLKRPYNFPV--PVPHNRFCVGSSHGWLATVLESYEVRLLNPFLPPPSNEIH 97
           KA  LYSL+ K+ Y   +  P   +RF +GSSHGW+ T  E  E+ L+NP       +I 
Sbjct: 61  KATGLYSLAEKKAYMLTLLDPALPSRFIIGSSHGWIITADERSELHLVNPI---TGKQIA 117

Query: 96  LPPLTAFAKGSV 61
           LPP+T   + S+
Sbjct: 118 LPPVTTIEQLSI 129



 Score = 24.6 bits (52), Expect(2) = 2e-06
 Identities = 9/13 (69%), Positives = 10/13 (76%)
 Frame = -2

Query: 383 RFGAVCRSWRSFY 345
           R G+VC SWRS Y
Sbjct: 22  RAGSVCNSWRSAY 34


>ref|NP_001068214.2| Os11g0598000 [Oryza sativa Japonica Group]
           gi|77551857|gb|ABA94654.1| F-box domain containing
           protein [Oryza sativa Japonica Group]
           gi|255680242|dbj|BAF28577.2| Os11g0598000 [Oryza sativa
           Japonica Group]
          Length = 326

 Score = 51.6 bits (122), Expect(2) = 2e-06
 Identities = 29/72 (40%), Positives = 41/72 (56%), Gaps = 2/72 (2%)
 Frame = -1

Query: 270 KARSLYSLSLKRPYNFPV--PVPHNRFCVGSSHGWLATVLESYEVRLLNPFLPPPSNEIH 97
           KA  LYSL+ K+ Y   +  P   +RF +GSSHGW+ T  E  E+ L+NP       +I 
Sbjct: 61  KATGLYSLAEKKAYMLTLLDPALPSRFIIGSSHGWIITADERSELHLVNPI---TGKQIA 117

Query: 96  LPPLTAFAKGSV 61
           LPP+T   + S+
Sbjct: 118 LPPVTTIEQLSI 129



 Score = 24.6 bits (52), Expect(2) = 2e-06
 Identities = 9/13 (69%), Positives = 10/13 (76%)
 Frame = -2

Query: 383 RFGAVCRSWRSFY 345
           R G+VC SWRS Y
Sbjct: 22  RAGSVCNSWRSAY 34


>ref|XP_003616648.1| F-box protein SKIP23 [Medicago truncatula]
           gi|355517983|gb|AES99606.1| F-box protein SKIP23
           [Medicago truncatula]
          Length = 291

 Score = 50.8 bits (120), Expect(2) = 4e-06
 Identities = 33/87 (37%), Positives = 45/87 (51%), Gaps = 1/87 (1%)
 Frame = -1

Query: 258 LYSLSLKRPYNFPVPVPHNRF-CVGSSHGWLATVLESYEVRLLNPFLPPPSNEIHLPPLT 82
           LYS+  KR Y F  P+ + +  C G+SHGWLA    ++ V +LNPF       I LPPL 
Sbjct: 66  LYSIPAKRMYAFKFPIINYKITCCGNSHGWLALEDRNHVVTILNPF--KNVAHISLPPLN 123

Query: 81  AFAKGSVTGESIQHLGYIRKIVLSANP 1
              K S           ++K+ LSA+P
Sbjct: 124 NAYKSSCY--------VVKKVTLSADP 142



 Score = 24.6 bits (52), Expect(2) = 4e-06
 Identities = 8/10 (80%), Positives = 10/10 (100%)
 Frame = -2

Query: 380 FGAVCRSWRS 351
           FGAVC++WRS
Sbjct: 29  FGAVCKNWRS 38


>gb|EAY80873.1| hypothetical protein OsI_36047 [Oryza sativa Indica Group]
          Length = 414

 Score = 50.4 bits (119), Expect(2) = 5e-06
 Identities = 28/65 (43%), Positives = 38/65 (58%), Gaps = 2/65 (3%)
 Frame = -1

Query: 270 KARSLYSLSLKRPYNFPV--PVPHNRFCVGSSHGWLATVLESYEVRLLNPFLPPPSNEIH 97
           KA  LYSL+ K+ Y   +  P   +RF +GSSHGW+ T  E  E+ L+NP       +I 
Sbjct: 61  KATGLYSLAEKKAYMLTLLDPALPSRFIIGSSHGWIITADERSELHLVNPI---TGKQIA 117

Query: 96  LPPLT 82
           LPP+T
Sbjct: 118 LPPVT 122



 Score = 24.6 bits (52), Expect(2) = 5e-06
 Identities = 9/13 (69%), Positives = 10/13 (76%)
 Frame = -2

Query: 383 RFGAVCRSWRSFY 345
           R G+VC SWRS Y
Sbjct: 22  RAGSVCNSWRSAY 34