BLASTX nr result

ID: Coptis21_contig00027802 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00027802
         (372 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002313189.1| predicted protein [Populus trichocarpa] gi|2...    67   1e-09
ref|XP_002267686.1| PREDICTED: uncharacterized protein LOC100241...    66   3e-09
emb|CAN66218.1| hypothetical protein VITISV_024777 [Vitis vinifera]    66   3e-09
ref|XP_003634427.1| PREDICTED: uncharacterized protein LOC100854...    60   1e-07
ref|XP_002298783.1| predicted protein [Populus trichocarpa] gi|2...    60   1e-07

>ref|XP_002313189.1| predicted protein [Populus trichocarpa] gi|222849597|gb|EEE87144.1|
           predicted protein [Populus trichocarpa]
          Length = 185

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 39/76 (51%), Positives = 47/76 (61%), Gaps = 15/76 (19%)
 Frame = -3

Query: 184 WTMYLDHSVSPHPSQRNDG----FVDEDS--FYN---------EEYKECQGKEEDEEDLS 50
           WT+YL+ S  PHP+ ++ G    FVD  S  F           EE  E +G+ E+EEDLS
Sbjct: 17  WTLYLEQSFLPHPNPKHRGNSTDFVDAKSTGFCRKGKSTKEDCEEEDEGEGEGEEEEDLS 76

Query: 49  MVSDASSGPPHCHEDE 2
           MVSDASSGPPH HEDE
Sbjct: 77  MVSDASSGPPHFHEDE 92


>ref|XP_002267686.1| PREDICTED: uncharacterized protein LOC100241214 [Vitis vinifera]
           gi|296083030|emb|CBI22434.3| unnamed protein product
           [Vitis vinifera]
          Length = 195

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 34/62 (54%), Positives = 43/62 (69%), Gaps = 1/62 (1%)
 Frame = -3

Query: 184 WTMYLDHS-VSPHPSQRNDGFVDEDSFYNEEYKECQGKEEDEEDLSMVSDASSGPPHCHE 8
           WT+YL+HS +S  P  R  GFVD +    ++    + +EE+EEDLSMVSDASSGPPH  E
Sbjct: 16  WTLYLEHSFLSADPLHRGSGFVDGEVKRGKD----EAEEEEEEDLSMVSDASSGPPHFQE 71

Query: 7   DE 2
           DE
Sbjct: 72  DE 73


>emb|CAN66218.1| hypothetical protein VITISV_024777 [Vitis vinifera]
          Length = 211

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 34/62 (54%), Positives = 43/62 (69%), Gaps = 1/62 (1%)
 Frame = -3

Query: 184 WTMYLDHS-VSPHPSQRNDGFVDEDSFYNEEYKECQGKEEDEEDLSMVSDASSGPPHCHE 8
           WT+YL+HS +S  P  R  GFVD +    ++    + +EE+EEDLSMVSDASSGPPH  E
Sbjct: 16  WTLYLEHSFLSADPLHRGSGFVDGEVKRGKD----EAEEEEEEDLSMVSDASSGPPHFQE 71

Query: 7   DE 2
           DE
Sbjct: 72  DE 73


>ref|XP_003634427.1| PREDICTED: uncharacterized protein LOC100854033 [Vitis vinifera]
          Length = 185

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 36/63 (57%), Positives = 41/63 (65%), Gaps = 2/63 (3%)
 Frame = -3

Query: 184 WTMYLDHSVSPHPSQRNDG-FVDED-SFYNEEYKECQGKEEDEEDLSMVSDASSGPPHCH 11
           WT+YLD S S     R  G  VDED    N E     G++++EEDLSMVSDASSGPPH H
Sbjct: 16  WTLYLDQSSSSANECRRAGRVVDEDCGRKNAEV----GQQDEEEDLSMVSDASSGPPHFH 71

Query: 10  EDE 2
           EDE
Sbjct: 72  EDE 74


>ref|XP_002298783.1| predicted protein [Populus trichocarpa] gi|222846041|gb|EEE83588.1|
           predicted protein [Populus trichocarpa]
          Length = 227

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 34/74 (45%), Positives = 44/74 (59%), Gaps = 13/74 (17%)
 Frame = -3

Query: 184 WTMYLDHSVSPHPSQRN---DGFVDEDSF----------YNEEYKECQGKEEDEEDLSMV 44
           WT+YL+ S   +P+ ++     FVD +S              E  E + +EE+EEDLSMV
Sbjct: 16  WTLYLEQSFLSNPNSKHRNKTNFVDAESAGFCRKGKNTREESEEDEEEEEEEEEEDLSMV 75

Query: 43  SDASSGPPHCHEDE 2
           SDASSGPPH HEDE
Sbjct: 76  SDASSGPPHFHEDE 89


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