BLASTX nr result

ID: Coptis21_contig00027795 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00027795
         (631 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632628.1| PREDICTED: LOW QUALITY PROTEIN: DNA replicat...   347   1e-93
ref|XP_004156637.1| PREDICTED: DNA helicase MCM8-like [Cucumis s...   337   8e-91
ref|XP_004137962.1| PREDICTED: DNA helicase MCM8-like [Cucumis s...   337   8e-91
ref|XP_002326332.1| predicted protein [Populus trichocarpa] gi|2...   337   1e-90
ref|XP_002525183.1| DNA replication licensing factor MCM8, putat...   333   1e-89

>ref|XP_003632628.1| PREDICTED: LOW QUALITY PROTEIN: DNA replication licensing factor
           MCM8-like [Vitis vinifera]
          Length = 754

 Score =  347 bits (889), Expect = 1e-93
 Identities = 168/210 (80%), Positives = 187/210 (89%)
 Frame = -1

Query: 631 LVCVRGTVVKVSSVKPLVIHMDFSCAKCGSLISRVFPDGKFSPPTTCIIQGCKSRTFCPI 452
           LV VRGTVVK S+VKPLV+ M F+C KC + I R+F DGKFSPP+ C + GCKSRTF PI
Sbjct: 147 LVSVRGTVVKASTVKPLVVQMTFACVKCQTNILRIFHDGKFSPPSVCTLHGCKSRTFTPI 206

Query: 451 RNSARPIDFQKIRIQELLRSENHEEGRVPRTVECELTEDLVDVCIPGDVVTVTGIIKVIN 272
           R++A+PIDFQKIR+QE+L+SENHEEGRVPRTVECELTEDLVD CIPGDVVTVTGII+ IN
Sbjct: 207 RSTAQPIDFQKIRLQEILKSENHEEGRVPRTVECELTEDLVDACIPGDVVTVTGIIRQIN 266

Query: 271 NYMDVGGGKSKNKNQGLYYLYLEAVSVKNSKSQSRPEDSLDSSADPRATELFDLYSFSPR 92
           NYMD+GGGKSKNKNQGL+YLYLEAVS+KNSKSQ   ED  DS+AD RATEL DL+SFSPR
Sbjct: 267 NYMDIGGGKSKNKNQGLFYLYLEAVSIKNSKSQYISEDLQDSNADARATELLDLFSFSPR 326

Query: 91  DLEFIVKFSEEHGSDVFRQILQSICPSIYG 2
           DLEFIVKFSEEHGSD FRQILQSICPSIYG
Sbjct: 327 DLEFIVKFSEEHGSDRFRQILQSICPSIYG 356


>ref|XP_004156637.1| PREDICTED: DNA helicase MCM8-like [Cucumis sativus]
          Length = 786

 Score =  337 bits (865), Expect = 8e-91
 Identities = 164/210 (78%), Positives = 186/210 (88%)
 Frame = -1

Query: 631 LVCVRGTVVKVSSVKPLVIHMDFSCAKCGSLISRVFPDGKFSPPTTCIIQGCKSRTFCPI 452
           LV VRGTVVKVS+VKPLV+ M F CAKC S I+  FPDGKFSPP+ C + GCKS+TF PI
Sbjct: 134 LVSVRGTVVKVSTVKPLVVQMSFGCAKCKSHITLSFPDGKFSPPSFCELDGCKSKTFNPI 193

Query: 451 RNSARPIDFQKIRIQELLRSENHEEGRVPRTVECELTEDLVDVCIPGDVVTVTGIIKVIN 272
           R++A  IDFQKIR+QEL + ++HEEGRVPRTVECELTEDLVD CIPGDVVTVTGII+VIN
Sbjct: 194 RSTAEAIDFQKIRLQELTKPDDHEEGRVPRTVECELTEDLVDACIPGDVVTVTGIIRVIN 253

Query: 271 NYMDVGGGKSKNKNQGLYYLYLEAVSVKNSKSQSRPEDSLDSSADPRATELFDLYSFSPR 92
           NYMD+GGGKSK+KNQG YYLYLEAVS+KNSKSQS PE+  DS+++ RATEL DL+SFSPR
Sbjct: 254 NYMDIGGGKSKSKNQGFYYLYLEAVSIKNSKSQSTPEELQDSNSNARATELLDLFSFSPR 313

Query: 91  DLEFIVKFSEEHGSDVFRQILQSICPSIYG 2
           DLEFIVKFS E+GSDVFRQILQSICPSIYG
Sbjct: 314 DLEFIVKFSGEYGSDVFRQILQSICPSIYG 343


>ref|XP_004137962.1| PREDICTED: DNA helicase MCM8-like [Cucumis sativus]
          Length = 793

 Score =  337 bits (865), Expect = 8e-91
 Identities = 164/210 (78%), Positives = 186/210 (88%)
 Frame = -1

Query: 631 LVCVRGTVVKVSSVKPLVIHMDFSCAKCGSLISRVFPDGKFSPPTTCIIQGCKSRTFCPI 452
           LV VRGTVVKVS+VKPLV+ M F CAKC S I+  FPDGKFSPP+ C + GCKS+TF PI
Sbjct: 141 LVSVRGTVVKVSTVKPLVVQMSFGCAKCKSHITLSFPDGKFSPPSFCELDGCKSKTFNPI 200

Query: 451 RNSARPIDFQKIRIQELLRSENHEEGRVPRTVECELTEDLVDVCIPGDVVTVTGIIKVIN 272
           R++A  IDFQKIR+QEL + ++HEEGRVPRTVECELTEDLVD CIPGDVVTVTGII+VIN
Sbjct: 201 RSTAEAIDFQKIRLQELTKPDDHEEGRVPRTVECELTEDLVDACIPGDVVTVTGIIRVIN 260

Query: 271 NYMDVGGGKSKNKNQGLYYLYLEAVSVKNSKSQSRPEDSLDSSADPRATELFDLYSFSPR 92
           NYMD+GGGKSK+KNQG YYLYLEAVS+KNSKSQS PE+  DS+++ RATEL DL+SFSPR
Sbjct: 261 NYMDIGGGKSKSKNQGFYYLYLEAVSIKNSKSQSTPEELQDSNSNARATELLDLFSFSPR 320

Query: 91  DLEFIVKFSEEHGSDVFRQILQSICPSIYG 2
           DLEFIVKFS E+GSDVFRQILQSICPSIYG
Sbjct: 321 DLEFIVKFSGEYGSDVFRQILQSICPSIYG 350


>ref|XP_002326332.1| predicted protein [Populus trichocarpa] gi|222833525|gb|EEE72002.1|
           predicted protein [Populus trichocarpa]
          Length = 745

 Score =  337 bits (864), Expect = 1e-90
 Identities = 164/210 (78%), Positives = 183/210 (87%)
 Frame = -1

Query: 631 LVCVRGTVVKVSSVKPLVIHMDFSCAKCGSLISRVFPDGKFSPPTTCIIQGCKSRTFCPI 452
           LV VRG+VVKVS+V+PLV+ M+F+CAKC   I R+FPDGKFSPPT C + GCKSRTF PI
Sbjct: 147 LVSVRGSVVKVSNVRPLVVQMNFNCAKCKYSILRIFPDGKFSPPTVCSLNGCKSRTFNPI 206

Query: 451 RNSARPIDFQKIRIQELLRSENHEEGRVPRTVECELTEDLVDVCIPGDVVTVTGIIKVIN 272
           R+SAR IDFQKIR+QELLRSE+HEEGRVPRTVECELTEDLVD CIPGDVVTVTGIIK  N
Sbjct: 207 RSSARAIDFQKIRLQELLRSEDHEEGRVPRTVECELTEDLVDACIPGDVVTVTGIIKTFN 266

Query: 271 NYMDVGGGKSKNKNQGLYYLYLEAVSVKNSKSQSRPEDSLDSSADPRATELFDLYSFSPR 92
           + +D GGGKSKNKNQG YYLYLE VS+KNSK QS  ++  DS  + RATEL DL+SFSPR
Sbjct: 267 SNLDTGGGKSKNKNQGFYYLYLEVVSIKNSKLQSTSDNLQDSKCNARATELSDLFSFSPR 326

Query: 91  DLEFIVKFSEEHGSDVFRQILQSICPSIYG 2
           DLEFIVKFSEEHGSD+FRQILQSICPSIYG
Sbjct: 327 DLEFIVKFSEEHGSDIFRQILQSICPSIYG 356


>ref|XP_002525183.1| DNA replication licensing factor MCM8, putative [Ricinus communis]
           gi|223535480|gb|EEF37149.1| DNA replication licensing
           factor MCM8, putative [Ricinus communis]
          Length = 757

 Score =  333 bits (855), Expect = 1e-89
 Identities = 161/210 (76%), Positives = 183/210 (87%)
 Frame = -1

Query: 631 LVCVRGTVVKVSSVKPLVIHMDFSCAKCGSLISRVFPDGKFSPPTTCIIQGCKSRTFCPI 452
           LV VRGTVVK+S+V+PLV+ M F C KC S I RVFPDGKFSPPT C + GCKS+TF PI
Sbjct: 154 LVSVRGTVVKLSTVRPLVVQMSFDCEKCKSNIIRVFPDGKFSPPTICNLNGCKSKTFHPI 213

Query: 451 RNSARPIDFQKIRIQELLRSENHEEGRVPRTVECELTEDLVDVCIPGDVVTVTGIIKVIN 272
           R+SA+ IDFQKIRIQELLRSE+HEEGRVPRTVECELTEDLVD CIPGDVVTVTGII+ IN
Sbjct: 214 RSSAQAIDFQKIRIQELLRSEDHEEGRVPRTVECELTEDLVDACIPGDVVTVTGIIRTIN 273

Query: 271 NYMDVGGGKSKNKNQGLYYLYLEAVSVKNSKSQSRPEDSLDSSADPRATELFDLYSFSPR 92
           NY+D+GGGKSK KNQG YYLYLE +S+KNSKSQS   D  D+ ++ RATEL DL+SFSP+
Sbjct: 274 NYVDIGGGKSKGKNQGFYYLYLEVISIKNSKSQSTSSDMQDARSNARATELSDLFSFSPK 333

Query: 91  DLEFIVKFSEEHGSDVFRQILQSICPSIYG 2
           DLEFIVKFSEE+GSDV RQ++QSICPSIYG
Sbjct: 334 DLEFIVKFSEEYGSDVLRQLVQSICPSIYG 363


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