BLASTX nr result

ID: Coptis21_contig00027778 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00027778
         (896 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285773.2| PREDICTED: uncharacterized protein LOC100267...   217   3e-54
ref|XP_002297610.1| predicted protein [Populus trichocarpa] gi|2...   199   6e-49
ref|XP_002523387.1| conserved hypothetical protein [Ricinus comm...   198   2e-48
emb|CAA18228.1| putative protein [Arabidopsis thaliana] gi|72694...   147   4e-33
ref|XP_002867565.1| predicted protein [Arabidopsis lyrata subsp....   145   1e-32

>ref|XP_002285773.2| PREDICTED: uncharacterized protein LOC100267326 [Vitis vinifera]
          Length = 557

 Score =  217 bits (553), Expect = 3e-54
 Identities = 130/266 (48%), Positives = 157/266 (59%), Gaps = 8/266 (3%)
 Frame = +1

Query: 67  MRKGFKNFCNGDGSTSTLNQRRNDQDMSCMVTPSLDSSSYLGDNNVANRTPTXXXXXXXX 246
           MR+G ++FCNGD STSTLNQ +         TP    SS +    +    PT        
Sbjct: 61  MRRGIRSFCNGDASTSTLNQHKT--------TPDHGDSSLISSTTLVEIPPTLEEMILQL 112

Query: 247 XXXXXAARKAKLNEYEEIRRRMSCVSNSDVLRSARNALNQYPRFSLDGKDAMYRSSFRNI 426
                 ARKAKL EY E++RRMSCV+NSD+LRSARNALNQYPRFSLDGKDAMYRSSFRN+
Sbjct: 113 ELEEEIARKAKLQEYGEMQRRMSCVNNSDILRSARNALNQYPRFSLDGKDAMYRSSFRNL 172

Query: 427 TPVMGGGYKDGRKSVCCGSGLTERIXXXXXXXXXIEKNLN--LPHTIGGKSVIWCKPSVV 600
            P        GRKS+CC  GL             +EK  +  LP T+ G+SVIWCKP VV
Sbjct: 173 AP--------GRKSICCNRGLVRGRCYTDEFDSKLEKKTSSCLPSTLAGESVIWCKPGVV 224

Query: 601 ATLMGLEAMPIPITRKLGKGRLGCKVKSQNL-RRAERHEMEKQRGFTMGMNG---WKEIG 768
           A LMGLE MP+P++      +L   V  QNL RRA+RHEME++R F M MNG    +  G
Sbjct: 225 AKLMGLEVMPVPVSCNRSTEKLNSIVNRQNLRRRAQRHEMERRR-FVMDMNGCGATQRQG 283

Query: 769 TEARRSFSTTNSSCVTK--AIPPVEL 840
           T A  S S T   CV +  A+ P  +
Sbjct: 284 TMA--SCSKTGRYCVMRPLAVEPANI 307


>ref|XP_002297610.1| predicted protein [Populus trichocarpa] gi|222844868|gb|EEE82415.1|
           predicted protein [Populus trichocarpa]
          Length = 272

 Score =  199 bits (507), Expect = 6e-49
 Identities = 124/262 (47%), Positives = 153/262 (58%), Gaps = 9/262 (3%)
 Frame = +1

Query: 67  MRKGFKNFCNGDGSTSTLNQRRNDQ----DMSCMVTPSLDSSSYLGDNNVANRTPTXXXX 234
           M++G +NFCNGD STSTL+Q         D  C VT      ++   +     +PT    
Sbjct: 1   MKRGIRNFCNGDASTSTLDQHNKANYTADDHHCFVTSPYTHMNHA--DTAQQGSPTLEQM 58

Query: 235 XXXXXXXXXAARKAKLNEYEEI---RRRMSCVSNSDVLRSARNALNQYPRFSLDGKDAMY 405
                     ARKAKLN Y ++     RMSCV+NSD+LRSARNAL+QYPRFSLDGKDAMY
Sbjct: 59  ILQLELEEEFARKAKLNNYVDVGLRAGRMSCVNNSDILRSARNALSQYPRFSLDGKDAMY 118

Query: 406 RSSFRNITPVMGGGYKDGRKSVCCGSGLTERIXXXXXXXXXIEKNLNLPHTIGGKSVIWC 585
           RSSFRN+  V       GRKSVCC  GL ER+          E+ L+LP T+ G+ V+WC
Sbjct: 119 RSSFRNLDSVSKAA--AGRKSVCCDHGLRERM-NRNNLGAKFERKLSLPPTLAGERVVWC 175

Query: 586 KPSVVATLMGLEAMPIPITRKLGKGRLGCKVKSQNL-RRAERHEMEKQ-RGFTMGMNGWK 759
           KP VVA LMGLEAMP+PI  +  K  L   +K QNL RRAERHE+E++  G     +G K
Sbjct: 176 KPGVVAKLMGLEAMPVPINSREDKETLASIIKRQNLRRRAERHEIERRLAGDVSAFDGIK 235

Query: 760 EIGTEARRSFSTTNSSCVTKAI 825
             G  +  S S     CVTK +
Sbjct: 236 R-GRSSMPSCSKP-GYCVTKPV 255


>ref|XP_002523387.1| conserved hypothetical protein [Ricinus communis]
           gi|223537337|gb|EEF38966.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 241

 Score =  198 bits (503), Expect = 2e-48
 Identities = 119/245 (48%), Positives = 153/245 (62%), Gaps = 9/245 (3%)
 Frame = +1

Query: 19  MKDLSFLLLKNNLGAKMRKGFKNFCNGDGSTSTLNQRRNDQDMSCMVTPSLDSSSYLGDN 198
           MKDLSF  LKN+ G KM+KG +NFCNGDGSTSTLNQ          + P  D   ++ D+
Sbjct: 1   MKDLSFFFLKNSFGGKMKKGIRNFCNGDGSTSTLNQHH--------LKPCNDPI-HVDDD 51

Query: 199 NVAN-----RTPTXXXXXXXXXXXXXAARKAKLNEYEEIR-RRMSCVSNSDVLRSARNAL 360
           ++A+     + PT              +RK+KLNE   +R RRMSCV+NSD+LRSARNAL
Sbjct: 52  DIASVDSQRKQPTLEEMILQLELEEEISRKSKLNELVAMRGRRMSCVNNSDILRSARNAL 111

Query: 361 NQYPRFSLDGKDAMYRSSFRNITPVMGGGYKDGRKSVCC--GSGLTERIXXXXXXXXXIE 534
           NQYPRFSLDGKDAMYRSSFRN+          GRKSVCC  G G+  R            
Sbjct: 112 NQYPRFSLDGKDAMYRSSFRNLDHHQVA----GRKSVCCCDGRGVLMR---ERNDGFLDR 164

Query: 535 KNLNLPHTIGGKSVIWCKPSVVATLMGLEAMPIPITRKLGKGRLGCKVKSQNL-RRAERH 711
           +N  LP ++ G++V+WCKP V+  LMGL+AMP+P+  +  K  +   +K Q+L RR ERH
Sbjct: 165 RNSCLPTSLRGENVVWCKPGVIGKLMGLDAMPVPVHNR--KETISPIIKRQSLRRRVERH 222

Query: 712 EMEKQ 726
           EME++
Sbjct: 223 EMERR 227


>emb|CAA18228.1| putative protein [Arabidopsis thaliana] gi|7269494|emb|CAB79497.1|
            putative protein [Arabidopsis thaliana]
          Length = 619

 Score =  147 bits (370), Expect = 4e-33
 Identities = 107/282 (37%), Positives = 142/282 (50%), Gaps = 20/282 (7%)
 Frame = +1

Query: 25   DLSFLLLKNNLGAKMRKGFKNFCNGDGSTSTLNQRRNDQDMSCMVTPSLDSSSYLGDNNV 204
            DL+  L K   G   R GF + C GDGST TLNQ + + D+   VTP  +++ + G +  
Sbjct: 341  DLTHKLFKRMRGRGPRSGFASSCGGDGSTLTLNQHQKN-DVGPSVTP--ENTPFGGGS-- 395

Query: 205  ANRTPTXXXXXXXXXXXXXAARKAKLNE-----YEEIR--------------RRMSCVSN 327
                 T               R+A+L E     Y+                  RMSCV++
Sbjct: 396  ---PRTLEEMILQLEVEEDIVRRARLRESYYGTYDNCDDHNDVDDDKLYHQPARMSCVNS 452

Query: 328  SDVLRSARNALNQYPRFSLDGKDAMYRSSF-RNITPVMGGGYKDGRKSVCCGSGLTERIX 504
            SD+LRSARNALNQYPRFSLDGKDAMYRSSF R++        + GR+S C     ++R  
Sbjct: 453  SDILRSARNALNQYPRFSLDGKDAMYRSSFRRHLGTSADMTIQGGRRSHCGDQRTSKRSS 512

Query: 505  XXXXXXXXIEKNLNLPHTIGGKSVIWCKPSVVATLMGLEAMPIPITRKLGKGRLGCKVKS 684
                      +   LP T+ G+SV+WCK  VVA LMGLE +P+P   K GK +LG  +K 
Sbjct: 513  QMSL------ETKRLPRTVAGESVVWCKTGVVAKLMGLEMIPVPDKGKSGKDKLGTLLKR 566

Query: 685  QNLRRAERHEMEKQRGFTMGMNGWKEIGTEARRSFSTTNSSC 810
            + LRR ER         T+ +NG         R+  TT +SC
Sbjct: 567  ERLRRRER---------TLDVNG---------RTGPTTEASC 590


>ref|XP_002867565.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
            gi|297313401|gb|EFH43824.1| predicted protein
            [Arabidopsis lyrata subsp. lyrata]
          Length = 647

 Score =  145 bits (366), Expect = 1e-32
 Identities = 101/270 (37%), Positives = 135/270 (50%), Gaps = 19/270 (7%)
 Frame = +1

Query: 58   GAKMRKGFKNFCNGDGSTSTLNQRRNDQDMSCMVTPSLDSSSYLGDNNVANRTPTXXXXX 237
            G   R GF + C GDGST TLNQ + + D+   VTP  +++ + G +       T     
Sbjct: 380  GRGPRSGFASSCGGDGSTLTLNQHQKN-DVGPSVTP--ENTPFGGGS-----PRTLEEMI 431

Query: 238  XXXXXXXXAARKAKLNE-----------YEEIRR--------RMSCVSNSDVLRSARNAL 360
                      R+A+L E           ++++          RMSCV++SD+LRSARNAL
Sbjct: 432  LQLEVEEDIVRRARLRESYYGTYDNCDDHDDVNDDQLYHQPVRMSCVNSSDILRSARNAL 491

Query: 361  NQYPRFSLDGKDAMYRSSFRNITPVMGGGYKDGRKSVCCGSGLTERIXXXXXXXXXIEKN 540
            NQYPRFSLDGKDAMYRSSFR            G +   CG   T +            + 
Sbjct: 492  NQYPRFSLDGKDAMYRSSFRRQLGTSADMTIQGGRRSHCGDQRTSKRSSQMSL-----ET 546

Query: 541  LNLPHTIGGKSVIWCKPSVVATLMGLEAMPIPITRKLGKGRLGCKVKSQNLRRAERHEME 720
              LP T+ G+SV+WCK  VVA LMGLE +P+P+  K GK +LG  +K + LRR ER    
Sbjct: 547  KRLPRTVAGESVVWCKTGVVAKLMGLEMIPVPVKGKTGKDKLGTLLKRERLRRRER---- 602

Query: 721  KQRGFTMGMNGWKEIGTEARRSFSTTNSSC 810
                 T+ +NG         R+  TT +SC
Sbjct: 603  -----TLDING---------RTGPTTEASC 618


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