BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00027777
         (355 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003621690.1| Cytochrome c biogenesis protein ccsA [Medica...    87   1e-15
ref|XP_003605652.1| GDSL esterase/lipase [Medicago truncatula] g...    82   3e-14
gb|ABD28730.1| Ribonuclease H [Medicago truncatula]                    79   4e-13
ref|XP_003605842.1| Glycerol-3-phosphate dehydrogenase [Medicago...    68   9e-10
ref|NP_197389.1| RNA-directed DNA polymerase (reverse transcript...    65   8e-09

>ref|XP_003621690.1| Cytochrome c biogenesis protein ccsA [Medicago truncatula]
           gi|355496705|gb|AES77908.1| Cytochrome c biogenesis
           protein ccsA [Medicago truncatula]
          Length = 666

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 39/92 (42%), Positives = 55/92 (59%)
 Frame = -3

Query: 338 GKLSFKDTYQVVRLLEPVVWWSTFIWKKYIPPSRSLLVWKLLHNKVPTDDNLEGKRVLNV 159
           G L+ +  Y+ +      V W  F+W  YIPPSRS + W+LLHNK+PTD+NL  +  L V
Sbjct: 16  GDLTNQLAYKFINETGNHVLWDKFLWNSYIPPSRSFITWRLLHNKLPTDENLRKRGCLIV 75

Query: 158 SCCSLCETPSCAETVSHLFFQCSFDSCVWNWV 63
           S C  C     AE+  H+FF+C   S +W+W+
Sbjct: 76  SICCFC--MKSAESSQHIFFECHVTSRLWDWL 105


>ref|XP_003605652.1| GDSL esterase/lipase [Medicago truncatula]
           gi|355506707|gb|AES87849.1| GDSL esterase/lipase
           [Medicago truncatula]
          Length = 1004

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 40/96 (41%), Positives = 55/96 (57%)
 Frame = -3

Query: 341 SGKLSFKDTYQVVRLLEPVVWWSTFIWKKYIPPSRSLLVWKLLHNKVPTDDNLEGKRVLN 162
           +G L  +D+Y           W+  IW K IPPS+S+L W+L+H+KVPTD+ L+ +    
Sbjct: 91  NGDLMMRDSYAFKNQPVNTHNWAKLIWSKDIPPSKSILTWRLIHDKVPTDEKLQQRGCQL 150

Query: 161 VSCCSLCETPSCAETVSHLFFQCSFDSCVWNWVFSI 54
            S CSLC T    ET  HLFF+C F   +W W  S+
Sbjct: 151 PSMCSLCGTH--VETSFHLFFECCFAFRIWCWFASV 184


>gb|ABD28730.1| Ribonuclease H [Medicago truncatula]
          Length = 409

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 38/96 (39%), Positives = 52/96 (54%), Gaps = 1/96 (1%)
 Frame = -3

Query: 347 SPSGKLSFKDTYQVVRLLEPVVWWSTFIWKKYIPPSRSLLVWKLLHNKVPTDDNLEGKRV 168
           S  G LS K  +  +    P V W+  +W  Y PP+ + + W+ LHNK+PTDDNL  +  
Sbjct: 48  SVDGDLSNKLAFSFLPGHGPTVHWAKMLWNAYTPPTGAFITWRFLHNKLPTDDNLRKRGC 107

Query: 167 LNVS-CCSLCETPSCAETVSHLFFQCSFDSCVWNWV 63
             VS CC  C     AET SH+F QC     +W+W+
Sbjct: 108 YIVSICCCFCRKQ--AETSSHIFLQCPVTLQLWDWL 141


>ref|XP_003605842.1| Glycerol-3-phosphate dehydrogenase [Medicago truncatula]
           gi|355506897|gb|AES88039.1| Glycerol-3-phosphate
           dehydrogenase [Medicago truncatula]
          Length = 866

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 31/71 (43%), Positives = 46/71 (64%)
 Frame = -3

Query: 266 IWKKYIPPSRSLLVWKLLHNKVPTDDNLEGKRVLNVSCCSLCETPSCAETVSHLFFQCSF 87
           IW   IPPS+SLL W+L+++K+P D+ L+ +  +    CSLC T    E+  HLFF+CS+
Sbjct: 47  IWSPNIPPSKSLLAWRLMNDKIPVDEKLKERGHVIPFICSLCMT--AEESSFHLFFECSY 104

Query: 86  DSCVWNWVFSI 54
              +W W+ SI
Sbjct: 105 AVHLWCWLASI 115


>ref|NP_197389.1| RNA-directed DNA polymerase (reverse transcriptase)-related family
           protein [Arabidopsis thaliana]
           gi|332005241|gb|AED92624.1| RNA-directed DNA polymerase
           (reverse transcriptase)-related family protein
           [Arabidopsis thaliana]
          Length = 295

 Score = 64.7 bits (156), Expect = 8e-09
 Identities = 34/97 (35%), Positives = 50/97 (51%)
 Frame = -3

Query: 329 SFKDTYQVVRLLEPVVWWSTFIWKKYIPPSRSLLVWKLLHNKVPTDDNLEGKRVLNVSCC 150
           S +DT++ +R+  P V W+  +W K   P  SL+ W     ++PT D L G  +   S  
Sbjct: 110 SSRDTWEQIRVHSPTVPWAKVVWFKEYIPRFSLITWMSFLERLPTRDRLRGWGMNIPSSW 169

Query: 149 SLCETPSCAETVSHLFFQCSFDSCVWNWVFSIFQIRP 39
            LC      ET +HLFF+CSF   +W +  S F+  P
Sbjct: 170 VLCSNGD--ETHAHLFFECSFSLAIWEFFASKFRPSP 204