BLASTX nr result

ID: Coptis21_contig00027770 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00027770
         (258 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283647.1| PREDICTED: glucan endo-1,3-beta-glucosidase ...   152   2e-35
ref|XP_002298356.1| glycoside hydrolase [Populus trichocarpa] gi...   152   3e-35
emb|CAN83700.1| hypothetical protein VITISV_027546 [Vitis vinifera]   151   5e-35
ref|XP_003607845.1| Glucan endo-1,3-beta-glucosidase [Medicago t...   150   1e-34
ref|XP_004151673.1| PREDICTED: glucan endo-1,3-beta-glucosidase-...   149   2e-34

>ref|XP_002283647.1| PREDICTED: glucan endo-1,3-beta-glucosidase isoform 1 [Vitis
           vinifera]
          Length = 447

 Score =  152 bits (385), Expect = 2e-35
 Identities = 68/85 (80%), Positives = 79/85 (92%)
 Frame = -1

Query: 255 GVHDKYTGKTYTNMFDAQMDAIYSAMKRLGYGDVDIVAAETGWPSVGEPNQPDVNLENAV 76
           GVHDK+TG TYTNMFDAQMDA+YSAMK LGYGDV+I+ AETGWPS+G+PNQ  VNLENA 
Sbjct: 223 GVHDKFTGITYTNMFDAQMDAVYSAMKVLGYGDVEIMVAETGWPSLGDPNQVGVNLENAA 282

Query: 75  SYNGNLVKHVNSGKGTPLMPNRKFE 1
           SYNGNL+KH++SGKGTPLMPNR+F+
Sbjct: 283 SYNGNLLKHISSGKGTPLMPNRRFQ 307


>ref|XP_002298356.1| glycoside hydrolase [Populus trichocarpa]
           gi|222845614|gb|EEE83161.1| glycoside hydrolase [Populus
           trichocarpa]
          Length = 457

 Score =  152 bits (384), Expect = 3e-35
 Identities = 70/85 (82%), Positives = 76/85 (89%)
 Frame = -1

Query: 255 GVHDKYTGKTYTNMFDAQMDAIYSAMKRLGYGDVDIVAAETGWPSVGEPNQPDVNLENAV 76
           GV D  TG  YTNMFDAQ+DA+YSAMKRLGYGDVDIV AETGWPSVG+PNQP V++ENA+
Sbjct: 222 GVFDAATGNNYTNMFDAQLDAVYSAMKRLGYGDVDIVVAETGWPSVGDPNQPGVSMENAI 281

Query: 75  SYNGNLVKHVNSGKGTPLMPNRKFE 1
           SYN NLVKHVNSGKGTPLMPNR FE
Sbjct: 282 SYNKNLVKHVNSGKGTPLMPNRTFE 306


>emb|CAN83700.1| hypothetical protein VITISV_027546 [Vitis vinifera]
          Length = 325

 Score =  151 bits (382), Expect = 5e-35
 Identities = 67/85 (78%), Positives = 79/85 (92%)
 Frame = -1

Query: 255 GVHDKYTGKTYTNMFDAQMDAIYSAMKRLGYGDVDIVAAETGWPSVGEPNQPDVNLENAV 76
           GVHDK+TG TYTNMFDAQMDA+YSAMK LGYGDV+I+ AETGWPS+G+PNQ  VNLENA 
Sbjct: 101 GVHDKFTGITYTNMFDAQMDAVYSAMKVLGYGDVEIMVAETGWPSLGDPNQVGVNLENAA 160

Query: 75  SYNGNLVKHVNSGKGTPLMPNRKFE 1
           +YNGNL+KH++SGKGTPLMPNR+F+
Sbjct: 161 TYNGNLLKHISSGKGTPLMPNRRFQ 185


>ref|XP_003607845.1| Glucan endo-1,3-beta-glucosidase [Medicago truncatula]
           gi|355508900|gb|AES90042.1| Glucan
           endo-1,3-beta-glucosidase [Medicago truncatula]
          Length = 512

 Score =  150 bits (379), Expect = 1e-34
 Identities = 68/85 (80%), Positives = 76/85 (89%)
 Frame = -1

Query: 255 GVHDKYTGKTYTNMFDAQMDAIYSAMKRLGYGDVDIVAAETGWPSVGEPNQPDVNLENAV 76
           GV DK TG  YTNMFDAQMDA+YSAMK++GYGDVD+V  ETGWPS+G+P QP V+LENAV
Sbjct: 223 GVFDKATGINYTNMFDAQMDAVYSAMKKVGYGDVDLVVGETGWPSLGDPGQPGVSLENAV 282

Query: 75  SYNGNLVKHVNSGKGTPLMPNRKFE 1
           SYNGNL+KHVNSGKGTPLMPNR FE
Sbjct: 283 SYNGNLIKHVNSGKGTPLMPNRTFE 307


>ref|XP_004151673.1| PREDICTED: glucan endo-1,3-beta-glucosidase-like [Cucumis sativus]
           gi|449523952|ref|XP_004168987.1| PREDICTED: glucan
           endo-1,3-beta-glucosidase-like [Cucumis sativus]
          Length = 489

 Score =  149 bits (377), Expect = 2e-34
 Identities = 68/86 (79%), Positives = 76/86 (88%)
 Frame = -1

Query: 258 PGVHDKYTGKTYTNMFDAQMDAIYSAMKRLGYGDVDIVAAETGWPSVGEPNQPDVNLENA 79
           PGV D  TGK YTNMFDAQ+DA+YSAMK++GYGDVDIV AETGWPS G+PNQ  V++ENA
Sbjct: 218 PGVFDNATGKHYTNMFDAQLDAVYSAMKKVGYGDVDIVVAETGWPSAGDPNQAGVSMENA 277

Query: 78  VSYNGNLVKHVNSGKGTPLMPNRKFE 1
           +SYN NLVKHVNSGKGTPLMPNR FE
Sbjct: 278 ISYNRNLVKHVNSGKGTPLMPNRTFE 303


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