BLASTX nr result

ID: Coptis21_contig00027763 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00027763
         (581 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002315385.1| predicted protein [Populus trichocarpa] gi|2...    69   6e-10
emb|CAN79598.1| hypothetical protein VITISV_020993 [Vitis vinifera]    66   4e-09

>ref|XP_002315385.1| predicted protein [Populus trichocarpa] gi|222864425|gb|EEF01556.1|
           predicted protein [Populus trichocarpa]
          Length = 306

 Score = 68.9 bits (167), Expect = 6e-10
 Identities = 41/129 (31%), Positives = 70/129 (54%), Gaps = 4/129 (3%)
 Frame = -2

Query: 466 ILITLCYLYLAAIWIFSMVLTIMEINLNEPMVLQKFEELNKGRRLQGFVLMLFASI---- 299
           IL  L YLYL A W  ++V++++E +      L++ E+L +GR++QGF+LM   +     
Sbjct: 168 ILAALFYLYLDASWTLALVISVLENDSCGTKGLKRSEKLIRGRKIQGFLLMFILTALVVP 227

Query: 298 VSIVMVVAFAFERRKINQGIDTQLANGIMMLCYVCLLKFFMLVLYSVFYNESKRRNGEQV 119
           + +++ V    +      G   Q A   +     CL KFF+ V+++VFY E K+  GE+V
Sbjct: 228 IYVLLYVTATDDDDDDELGPFAQFAFRFVATVLFCLSKFFVSVVFTVFYYECKQSEGERV 287

Query: 118 EEETRLSYA 92
             E  + Y+
Sbjct: 288 VMELGVGYS 296


>emb|CAN79598.1| hypothetical protein VITISV_020993 [Vitis vinifera]
          Length = 322

 Score = 66.2 bits (160), Expect = 4e-09
 Identities = 35/119 (29%), Positives = 63/119 (52%), Gaps = 2/119 (1%)
 Frame = -2

Query: 466 ILITLCYLYLAAIWIFSMVLTIMEINLNEPMVLQKFEELNKGRRLQGFVLMLFASIVSIV 287
           ++  L Y+YL ++    +V+++M+        L+K  +L+ GR+LQGF LML   ++SI 
Sbjct: 184 VMAALLYIYLTSVSTLGLVVSVMDDECYGAKALEKAVKLSXGRKLQGFFLMLILELLSIP 243

Query: 286 MVVAFAFERRKINQ--GIDTQLANGIMMLCYVCLLKFFMLVLYSVFYNESKRRNGEQVE 116
           + + F       +   G  T    G +     CL+     V+++VFY+E K+ +GE +E
Sbjct: 244 IYILFYVASTDDDDEIGAVTLFGFGFLATVLFCLVNMLSYVVFAVFYSECKKNSGEGIE 302


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