BLASTX nr result
ID: Coptis21_contig00027759
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00027759 (266 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|ABD63157.1| Retrotransposon gag protein [Asparagus officinalis] 62 6e-08 gb|ABD63131.1| Retrotransposon gag protein [Asparagus officinalis] 58 9e-07 emb|CAN69639.1| hypothetical protein VITISV_040272 [Vitis vinifera] 57 1e-06 emb|CAN69709.1| hypothetical protein VITISV_018584 [Vitis vinifera] 57 1e-06 emb|CAN66744.1| hypothetical protein VITISV_013698 [Vitis vinifera] 57 1e-06 >gb|ABD63157.1| Retrotransposon gag protein [Asparagus officinalis] Length = 279 Score = 61.6 bits (148), Expect = 6e-08 Identities = 31/86 (36%), Positives = 47/86 (54%) Frame = -3 Query: 258 PIIGDPPNSIVFPETEANQFELRASVISMLPKFNGTDSVQPYVHMNKFLSVMRTFKNQNI 79 PI P+ I PET FELR I+MLPKF G + Y+ +++F V K + + Sbjct: 15 PIRNAIPSCIRLPETNGISFELRPQYINMLPKFLGNKTEDAYIFISEFEEVCIMIKMREL 74 Query: 78 NAESIKLILFPLSLEGSASEWLTAQP 1 N +++KL P +L+ A +WL + P Sbjct: 75 NEDAVKLRFIPFALKDKAKKWLYSLP 100 >gb|ABD63131.1| Retrotransposon gag protein [Asparagus officinalis] Length = 321 Score = 57.8 bits (138), Expect = 9e-07 Identities = 28/80 (35%), Positives = 44/80 (55%) Frame = -3 Query: 240 PNSIVFPETEANQFELRASVISMLPKFNGTDSVQPYVHMNKFLSVMRTFKNQNINAESIK 61 P+ I PE FELR I+MLPKF G ++ Y+ +++F V K + + ++IK Sbjct: 19 PSCIRLPEVNGANFELRPHFINMLPKFLGNETEDAYIFISEFEEVCIMIKMRELTEDAIK 78 Query: 60 LILFPLSLEGSASEWLTAQP 1 L P +L+ A +WL + P Sbjct: 79 LRFIPFALKDKAKKWLYSLP 98 >emb|CAN69639.1| hypothetical protein VITISV_040272 [Vitis vinifera] Length = 437 Score = 57.4 bits (137), Expect = 1e-06 Identities = 29/81 (35%), Positives = 46/81 (56%), Gaps = 3/81 (3%) Frame = -3 Query: 234 SIVFPETEANQFELRASVISMLP---KFNGTDSVQPYVHMNKFLSVMRTFKNQNINAESI 64 SI P +AN FE++ ++I M+ +F G + P +H+ FL + TFK+ + ++I Sbjct: 235 SIQRPPIQANNFEIKLAIIQMIRSSVQFGGLANDDPNLHIANFLEICDTFKHNGVIDDAI 294 Query: 63 KLILFPLSLEGSASEWLTAQP 1 +L LFP SL A WL + P Sbjct: 295 RLRLFPFSLNNKAKAWLISLP 315 >emb|CAN69709.1| hypothetical protein VITISV_018584 [Vitis vinifera] Length = 363 Score = 57.4 bits (137), Expect = 1e-06 Identities = 28/82 (34%), Positives = 46/82 (56%), Gaps = 3/82 (3%) Frame = -3 Query: 237 NSIVFPETEANQFELRASVISMLP---KFNGTDSVQPYVHMNKFLSVMRTFKNQNINAES 67 +SI P +AN FE++ ++I M+ +F G + P +H+ FL + TFK+ + ++ Sbjct: 166 SSIRRPPIQANNFEIKLAIIQMIQSSIQFGGLANDDPNLHIANFLEIFYTFKHNGVTDDA 225 Query: 66 IKLILFPLSLEGSASEWLTAQP 1 I+L LFP L A WL + P Sbjct: 226 IRLRLFPFPLNNKAKAWLISLP 247 >emb|CAN66744.1| hypothetical protein VITISV_013698 [Vitis vinifera] Length = 1633 Score = 57.4 bits (137), Expect = 1e-06 Identities = 26/77 (33%), Positives = 45/77 (58%) Frame = -3 Query: 237 NSIVFPETEANQFELRASVISMLPKFNGTDSVQPYVHMNKFLSVMRTFKNQNINAESIKL 58 +S + P TE Q +R ++ +LP F+G +S PY H+ +F V TF+ ++ + ++L Sbjct: 65 SSCIVPPTE--QLVIRPHIVPLLPTFHGIESENPYAHIKEFEDVCNTFREGGVSIDLMRL 122 Query: 57 ILFPLSLEGSASEWLTA 7 LFP +L+ A WL + Sbjct: 123 KLFPFTLKDKAKIWLNS 139