BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00027759
         (266 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD63157.1| Retrotransposon gag protein [Asparagus officinalis]     62   6e-08
gb|ABD63131.1| Retrotransposon gag protein [Asparagus officinalis]     58   9e-07
emb|CAN69639.1| hypothetical protein VITISV_040272 [Vitis vinifera]    57   1e-06
emb|CAN69709.1| hypothetical protein VITISV_018584 [Vitis vinifera]    57   1e-06
emb|CAN66744.1| hypothetical protein VITISV_013698 [Vitis vinifera]    57   1e-06

>gb|ABD63157.1| Retrotransposon gag protein [Asparagus officinalis]
          Length = 279

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 31/86 (36%), Positives = 47/86 (54%)
 Frame = -3

Query: 258 PIIGDPPNSIVFPETEANQFELRASVISMLPKFNGTDSVQPYVHMNKFLSVMRTFKNQNI 79
           PI    P+ I  PET    FELR   I+MLPKF G  +   Y+ +++F  V    K + +
Sbjct: 15  PIRNAIPSCIRLPETNGISFELRPQYINMLPKFLGNKTEDAYIFISEFEEVCIMIKMREL 74

Query: 78  NAESIKLILFPLSLEGSASEWLTAQP 1
           N +++KL   P +L+  A +WL + P
Sbjct: 75  NEDAVKLRFIPFALKDKAKKWLYSLP 100


>gb|ABD63131.1| Retrotransposon gag protein [Asparagus officinalis]
          Length = 321

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 28/80 (35%), Positives = 44/80 (55%)
 Frame = -3

Query: 240 PNSIVFPETEANQFELRASVISMLPKFNGTDSVQPYVHMNKFLSVMRTFKNQNINAESIK 61
           P+ I  PE     FELR   I+MLPKF G ++   Y+ +++F  V    K + +  ++IK
Sbjct: 19  PSCIRLPEVNGANFELRPHFINMLPKFLGNETEDAYIFISEFEEVCIMIKMRELTEDAIK 78

Query: 60  LILFPLSLEGSASEWLTAQP 1
           L   P +L+  A +WL + P
Sbjct: 79  LRFIPFALKDKAKKWLYSLP 98


>emb|CAN69639.1| hypothetical protein VITISV_040272 [Vitis vinifera]
          Length = 437

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 29/81 (35%), Positives = 46/81 (56%), Gaps = 3/81 (3%)
 Frame = -3

Query: 234 SIVFPETEANQFELRASVISMLP---KFNGTDSVQPYVHMNKFLSVMRTFKNQNINAESI 64
           SI  P  +AN FE++ ++I M+    +F G  +  P +H+  FL +  TFK+  +  ++I
Sbjct: 235 SIQRPPIQANNFEIKLAIIQMIRSSVQFGGLANDDPNLHIANFLEICDTFKHNGVIDDAI 294

Query: 63  KLILFPLSLEGSASEWLTAQP 1
           +L LFP SL   A  WL + P
Sbjct: 295 RLRLFPFSLNNKAKAWLISLP 315


>emb|CAN69709.1| hypothetical protein VITISV_018584 [Vitis vinifera]
          Length = 363

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 28/82 (34%), Positives = 46/82 (56%), Gaps = 3/82 (3%)
 Frame = -3

Query: 237 NSIVFPETEANQFELRASVISMLP---KFNGTDSVQPYVHMNKFLSVMRTFKNQNINAES 67
           +SI  P  +AN FE++ ++I M+    +F G  +  P +H+  FL +  TFK+  +  ++
Sbjct: 166 SSIRRPPIQANNFEIKLAIIQMIQSSIQFGGLANDDPNLHIANFLEIFYTFKHNGVTDDA 225

Query: 66  IKLILFPLSLEGSASEWLTAQP 1
           I+L LFP  L   A  WL + P
Sbjct: 226 IRLRLFPFPLNNKAKAWLISLP 247


>emb|CAN66744.1| hypothetical protein VITISV_013698 [Vitis vinifera]
          Length = 1633

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 26/77 (33%), Positives = 45/77 (58%)
 Frame = -3

Query: 237 NSIVFPETEANQFELRASVISMLPKFNGTDSVQPYVHMNKFLSVMRTFKNQNINAESIKL 58
           +S + P TE  Q  +R  ++ +LP F+G +S  PY H+ +F  V  TF+   ++ + ++L
Sbjct: 65  SSCIVPPTE--QLVIRPHIVPLLPTFHGIESENPYAHIKEFEDVCNTFREGGVSIDLMRL 122

Query: 57  ILFPLSLEGSASEWLTA 7
            LFP +L+  A  WL +
Sbjct: 123 KLFPFTLKDKAKIWLNS 139