BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00027755
         (548 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI36837.3| unnamed protein product [Vitis vinifera]              304   7e-81
ref|XP_002267393.1| PREDICTED: mismatch repair endonuclease PMS2...   304   7e-81
ref|XP_002523056.1| DNA mismatch repair protein pms2, putative [...   304   7e-81
ref|XP_002321013.1| predicted protein [Populus trichocarpa] gi|2...   298   5e-79
ref|XP_004136035.1| PREDICTED: mismatch repair endonuclease PMS2...   297   6e-79

>emb|CBI36837.3| unnamed protein product [Vitis vinifera]
          Length = 854

 Score =  304 bits (778), Expect = 7e-81
 Identities = 155/180 (86%), Positives = 168/180 (93%)
 Frame = +3

Query: 9   ESPNIRAINKSVVHRICSGQVILDLSSAVKELVENSLDAGSTSIEISLKEYGEESFKVID 188
           ESP IRAINK  VHRICSGQVILDLSSAVKELVENSLDAG+TSIEI+LKEYG+E F+VID
Sbjct: 8   ESPTIRAINKGAVHRICSGQVILDLSSAVKELVENSLDAGATSIEIALKEYGQEWFQVID 67

Query: 189 NGSGISPNNFKVLALKHHTSKISDFPDLQSLVTFGFRGEALSSLCALGNLTVETRTKDEP 368
           NG GISPNNFKVLALKHHTSK+ DFPDLQSL TFGFRGEALSSLCALGNLTVETRTK+E 
Sbjct: 68  NGCGISPNNFKVLALKHHTSKLIDFPDLQSLTTFGFRGEALSSLCALGNLTVETRTKNES 127

Query: 369 MATHLTFDRTGLLTCERKTARQIGTTVTVERLFSSLPVRSKEFSRNIRKEYAKLISLLNA 548
           +ATHLTFD +GLL  E+KTARQIGTTVTV++LFS+LPVRSKEFSRNIRKEY KLISLL+A
Sbjct: 128 VATHLTFDHSGLLRDEKKTARQIGTTVTVKKLFSNLPVRSKEFSRNIRKEYGKLISLLSA 187


>ref|XP_002267393.1| PREDICTED: mismatch repair endonuclease PMS2-like [Vitis vinifera]
          Length = 937

 Score =  304 bits (778), Expect = 7e-81
 Identities = 155/180 (86%), Positives = 168/180 (93%)
 Frame = +3

Query: 9   ESPNIRAINKSVVHRICSGQVILDLSSAVKELVENSLDAGSTSIEISLKEYGEESFKVID 188
           ESP IRAINK  VHRICSGQVILDLSSAVKELVENSLDAG+TSIEI+LKEYG+E F+VID
Sbjct: 8   ESPTIRAINKGAVHRICSGQVILDLSSAVKELVENSLDAGATSIEIALKEYGQEWFQVID 67

Query: 189 NGSGISPNNFKVLALKHHTSKISDFPDLQSLVTFGFRGEALSSLCALGNLTVETRTKDEP 368
           NG GISPNNFKVLALKHHTSK+ DFPDLQSL TFGFRGEALSSLCALGNLTVETRTK+E 
Sbjct: 68  NGCGISPNNFKVLALKHHTSKLIDFPDLQSLTTFGFRGEALSSLCALGNLTVETRTKNES 127

Query: 369 MATHLTFDRTGLLTCERKTARQIGTTVTVERLFSSLPVRSKEFSRNIRKEYAKLISLLNA 548
           +ATHLTFD +GLL  E+KTARQIGTTVTV++LFS+LPVRSKEFSRNIRKEY KLISLL+A
Sbjct: 128 VATHLTFDHSGLLRDEKKTARQIGTTVTVKKLFSNLPVRSKEFSRNIRKEYGKLISLLSA 187


>ref|XP_002523056.1| DNA mismatch repair protein pms2, putative [Ricinus communis]
           gi|223537618|gb|EEF39241.1| DNA mismatch repair protein
           pms2, putative [Ricinus communis]
          Length = 924

 Score =  304 bits (778), Expect = 7e-81
 Identities = 152/179 (84%), Positives = 170/179 (94%)
 Frame = +3

Query: 12  SPNIRAINKSVVHRICSGQVILDLSSAVKELVENSLDAGSTSIEISLKEYGEESFKVIDN 191
           SP I+ INK VVHRIC+GQVILDLSSAVKELVENSLDAG+TSIEISLK+YGE+SF+VIDN
Sbjct: 6   SPIIKPINKGVVHRICAGQVILDLSSAVKELVENSLDAGATSIEISLKDYGEDSFQVIDN 65

Query: 192 GSGISPNNFKVLALKHHTSKISDFPDLQSLVTFGFRGEALSSLCALGNLTVETRTKDEPM 371
           G G+SPNNFKVLALKHHTSK++DFPDLQSL TFGFRGEALSSLCALG LTVETRTK+E +
Sbjct: 66  GCGVSPNNFKVLALKHHTSKLADFPDLQSLTTFGFRGEALSSLCALGELTVETRTKNESV 125

Query: 372 ATHLTFDRTGLLTCERKTARQIGTTVTVERLFSSLPVRSKEFSRNIRKEYAKLISLLNA 548
           ATHL++DR+GLLT E+KTARQIGTTVTV++LFS+LPVRSKEFSRNIRKEY KLISLLNA
Sbjct: 126 ATHLSYDRSGLLTAEKKTARQIGTTVTVKKLFSNLPVRSKEFSRNIRKEYGKLISLLNA 184


>ref|XP_002321013.1| predicted protein [Populus trichocarpa] gi|222861786|gb|EEE99328.1|
           predicted protein [Populus trichocarpa]
          Length = 915

 Score =  298 bits (762), Expect = 5e-79
 Identities = 150/176 (85%), Positives = 165/176 (93%)
 Frame = +3

Query: 21  IRAINKSVVHRICSGQVILDLSSAVKELVENSLDAGSTSIEISLKEYGEESFKVIDNGSG 200
           IR INK+ VHRIC+GQVILDLSSAVKELVENSLDAG+TSIEISLK+YG ESF+VIDNG G
Sbjct: 8   IRPINKAAVHRICAGQVILDLSSAVKELVENSLDAGATSIEISLKDYGLESFQVIDNGCG 67

Query: 201 ISPNNFKVLALKHHTSKISDFPDLQSLVTFGFRGEALSSLCALGNLTVETRTKDEPMATH 380
           +SPNNFKVLALKHHTSK+ DF DLQSL TFGFRGEALSSLC LG+LTVETRTK+EP+ATH
Sbjct: 68  VSPNNFKVLALKHHTSKLGDFHDLQSLTTFGFRGEALSSLCVLGDLTVETRTKNEPVATH 127

Query: 381 LTFDRTGLLTCERKTARQIGTTVTVERLFSSLPVRSKEFSRNIRKEYAKLISLLNA 548
           LTF+ +GLLT ERKTARQ+GTTVTV++LFSSLPVRSKEFSRNIRKEY KLISLLNA
Sbjct: 128 LTFNHSGLLTAERKTARQVGTTVTVKKLFSSLPVRSKEFSRNIRKEYGKLISLLNA 183


>ref|XP_004136035.1| PREDICTED: mismatch repair endonuclease PMS2-like [Cucumis sativus]
           gi|449498483|ref|XP_004160549.1| PREDICTED: mismatch
           repair endonuclease PMS2-like [Cucumis sativus]
          Length = 921

 Score =  297 bits (761), Expect = 6e-79
 Identities = 148/181 (81%), Positives = 168/181 (92%)
 Frame = +3

Query: 6   VESPNIRAINKSVVHRICSGQVILDLSSAVKELVENSLDAGSTSIEISLKEYGEESFKVI 185
           V+SP I+ INK +VHRIC+GQVILDLSSAVKELVENSLDAG+TSIEISLK+YGEE F+VI
Sbjct: 7   VDSPAIKPINKGIVHRICAGQVILDLSSAVKELVENSLDAGATSIEISLKDYGEEWFQVI 66

Query: 186 DNGSGISPNNFKVLALKHHTSKISDFPDLQSLVTFGFRGEALSSLCALGNLTVETRTKDE 365
           DNGSGISP NF+VLALKHHTSK+SDFPDLQSL T+GFRGEALSSLC+LG LTVET+TK+E
Sbjct: 67  DNGSGISPTNFRVLALKHHTSKLSDFPDLQSLTTYGFRGEALSSLCSLGTLTVETKTKNE 126

Query: 366 PMATHLTFDRTGLLTCERKTARQIGTTVTVERLFSSLPVRSKEFSRNIRKEYAKLISLLN 545
            +ATHLTFD +GLL  E+KTARQ+GTTV V++LFS+LPVRSKEFSRNIRKEY KLISLLN
Sbjct: 127 SVATHLTFDHSGLLVAEKKTARQVGTTVMVKKLFSNLPVRSKEFSRNIRKEYGKLISLLN 186

Query: 546 A 548
           A
Sbjct: 187 A 187