BLASTX nr result
ID: Coptis21_contig00027755
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00027755 (548 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI36837.3| unnamed protein product [Vitis vinifera] 304 7e-81 ref|XP_002267393.1| PREDICTED: mismatch repair endonuclease PMS2... 304 7e-81 ref|XP_002523056.1| DNA mismatch repair protein pms2, putative [... 304 7e-81 ref|XP_002321013.1| predicted protein [Populus trichocarpa] gi|2... 298 5e-79 ref|XP_004136035.1| PREDICTED: mismatch repair endonuclease PMS2... 297 6e-79 >emb|CBI36837.3| unnamed protein product [Vitis vinifera] Length = 854 Score = 304 bits (778), Expect = 7e-81 Identities = 155/180 (86%), Positives = 168/180 (93%) Frame = +3 Query: 9 ESPNIRAINKSVVHRICSGQVILDLSSAVKELVENSLDAGSTSIEISLKEYGEESFKVID 188 ESP IRAINK VHRICSGQVILDLSSAVKELVENSLDAG+TSIEI+LKEYG+E F+VID Sbjct: 8 ESPTIRAINKGAVHRICSGQVILDLSSAVKELVENSLDAGATSIEIALKEYGQEWFQVID 67 Query: 189 NGSGISPNNFKVLALKHHTSKISDFPDLQSLVTFGFRGEALSSLCALGNLTVETRTKDEP 368 NG GISPNNFKVLALKHHTSK+ DFPDLQSL TFGFRGEALSSLCALGNLTVETRTK+E Sbjct: 68 NGCGISPNNFKVLALKHHTSKLIDFPDLQSLTTFGFRGEALSSLCALGNLTVETRTKNES 127 Query: 369 MATHLTFDRTGLLTCERKTARQIGTTVTVERLFSSLPVRSKEFSRNIRKEYAKLISLLNA 548 +ATHLTFD +GLL E+KTARQIGTTVTV++LFS+LPVRSKEFSRNIRKEY KLISLL+A Sbjct: 128 VATHLTFDHSGLLRDEKKTARQIGTTVTVKKLFSNLPVRSKEFSRNIRKEYGKLISLLSA 187 >ref|XP_002267393.1| PREDICTED: mismatch repair endonuclease PMS2-like [Vitis vinifera] Length = 937 Score = 304 bits (778), Expect = 7e-81 Identities = 155/180 (86%), Positives = 168/180 (93%) Frame = +3 Query: 9 ESPNIRAINKSVVHRICSGQVILDLSSAVKELVENSLDAGSTSIEISLKEYGEESFKVID 188 ESP IRAINK VHRICSGQVILDLSSAVKELVENSLDAG+TSIEI+LKEYG+E F+VID Sbjct: 8 ESPTIRAINKGAVHRICSGQVILDLSSAVKELVENSLDAGATSIEIALKEYGQEWFQVID 67 Query: 189 NGSGISPNNFKVLALKHHTSKISDFPDLQSLVTFGFRGEALSSLCALGNLTVETRTKDEP 368 NG GISPNNFKVLALKHHTSK+ DFPDLQSL TFGFRGEALSSLCALGNLTVETRTK+E Sbjct: 68 NGCGISPNNFKVLALKHHTSKLIDFPDLQSLTTFGFRGEALSSLCALGNLTVETRTKNES 127 Query: 369 MATHLTFDRTGLLTCERKTARQIGTTVTVERLFSSLPVRSKEFSRNIRKEYAKLISLLNA 548 +ATHLTFD +GLL E+KTARQIGTTVTV++LFS+LPVRSKEFSRNIRKEY KLISLL+A Sbjct: 128 VATHLTFDHSGLLRDEKKTARQIGTTVTVKKLFSNLPVRSKEFSRNIRKEYGKLISLLSA 187 >ref|XP_002523056.1| DNA mismatch repair protein pms2, putative [Ricinus communis] gi|223537618|gb|EEF39241.1| DNA mismatch repair protein pms2, putative [Ricinus communis] Length = 924 Score = 304 bits (778), Expect = 7e-81 Identities = 152/179 (84%), Positives = 170/179 (94%) Frame = +3 Query: 12 SPNIRAINKSVVHRICSGQVILDLSSAVKELVENSLDAGSTSIEISLKEYGEESFKVIDN 191 SP I+ INK VVHRIC+GQVILDLSSAVKELVENSLDAG+TSIEISLK+YGE+SF+VIDN Sbjct: 6 SPIIKPINKGVVHRICAGQVILDLSSAVKELVENSLDAGATSIEISLKDYGEDSFQVIDN 65 Query: 192 GSGISPNNFKVLALKHHTSKISDFPDLQSLVTFGFRGEALSSLCALGNLTVETRTKDEPM 371 G G+SPNNFKVLALKHHTSK++DFPDLQSL TFGFRGEALSSLCALG LTVETRTK+E + Sbjct: 66 GCGVSPNNFKVLALKHHTSKLADFPDLQSLTTFGFRGEALSSLCALGELTVETRTKNESV 125 Query: 372 ATHLTFDRTGLLTCERKTARQIGTTVTVERLFSSLPVRSKEFSRNIRKEYAKLISLLNA 548 ATHL++DR+GLLT E+KTARQIGTTVTV++LFS+LPVRSKEFSRNIRKEY KLISLLNA Sbjct: 126 ATHLSYDRSGLLTAEKKTARQIGTTVTVKKLFSNLPVRSKEFSRNIRKEYGKLISLLNA 184 >ref|XP_002321013.1| predicted protein [Populus trichocarpa] gi|222861786|gb|EEE99328.1| predicted protein [Populus trichocarpa] Length = 915 Score = 298 bits (762), Expect = 5e-79 Identities = 150/176 (85%), Positives = 165/176 (93%) Frame = +3 Query: 21 IRAINKSVVHRICSGQVILDLSSAVKELVENSLDAGSTSIEISLKEYGEESFKVIDNGSG 200 IR INK+ VHRIC+GQVILDLSSAVKELVENSLDAG+TSIEISLK+YG ESF+VIDNG G Sbjct: 8 IRPINKAAVHRICAGQVILDLSSAVKELVENSLDAGATSIEISLKDYGLESFQVIDNGCG 67 Query: 201 ISPNNFKVLALKHHTSKISDFPDLQSLVTFGFRGEALSSLCALGNLTVETRTKDEPMATH 380 +SPNNFKVLALKHHTSK+ DF DLQSL TFGFRGEALSSLC LG+LTVETRTK+EP+ATH Sbjct: 68 VSPNNFKVLALKHHTSKLGDFHDLQSLTTFGFRGEALSSLCVLGDLTVETRTKNEPVATH 127 Query: 381 LTFDRTGLLTCERKTARQIGTTVTVERLFSSLPVRSKEFSRNIRKEYAKLISLLNA 548 LTF+ +GLLT ERKTARQ+GTTVTV++LFSSLPVRSKEFSRNIRKEY KLISLLNA Sbjct: 128 LTFNHSGLLTAERKTARQVGTTVTVKKLFSSLPVRSKEFSRNIRKEYGKLISLLNA 183 >ref|XP_004136035.1| PREDICTED: mismatch repair endonuclease PMS2-like [Cucumis sativus] gi|449498483|ref|XP_004160549.1| PREDICTED: mismatch repair endonuclease PMS2-like [Cucumis sativus] Length = 921 Score = 297 bits (761), Expect = 6e-79 Identities = 148/181 (81%), Positives = 168/181 (92%) Frame = +3 Query: 6 VESPNIRAINKSVVHRICSGQVILDLSSAVKELVENSLDAGSTSIEISLKEYGEESFKVI 185 V+SP I+ INK +VHRIC+GQVILDLSSAVKELVENSLDAG+TSIEISLK+YGEE F+VI Sbjct: 7 VDSPAIKPINKGIVHRICAGQVILDLSSAVKELVENSLDAGATSIEISLKDYGEEWFQVI 66 Query: 186 DNGSGISPNNFKVLALKHHTSKISDFPDLQSLVTFGFRGEALSSLCALGNLTVETRTKDE 365 DNGSGISP NF+VLALKHHTSK+SDFPDLQSL T+GFRGEALSSLC+LG LTVET+TK+E Sbjct: 67 DNGSGISPTNFRVLALKHHTSKLSDFPDLQSLTTYGFRGEALSSLCSLGTLTVETKTKNE 126 Query: 366 PMATHLTFDRTGLLTCERKTARQIGTTVTVERLFSSLPVRSKEFSRNIRKEYAKLISLLN 545 +ATHLTFD +GLL E+KTARQ+GTTV V++LFS+LPVRSKEFSRNIRKEY KLISLLN Sbjct: 127 SVATHLTFDHSGLLVAEKKTARQVGTTVMVKKLFSNLPVRSKEFSRNIRKEYGKLISLLN 186 Query: 546 A 548 A Sbjct: 187 A 187