BLASTX nr result

ID: Coptis21_contig00027748 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00027748
         (654 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002521529.1| Disease resistance protein RGA2, putative [R...   268   7e-70
ref|XP_002327785.1| cc-nbs-lrr resistance protein [Populus trich...   248   7e-64
ref|XP_002268940.1| PREDICTED: disease resistance RPP13-like pro...   243   2e-62
emb|CAN63363.1| hypothetical protein VITISV_002407 [Vitis vinifera]   243   2e-62
gb|AAL01025.1|AF402758_1 NBS/LRR resistance protein-like protein...   239   4e-61

>ref|XP_002521529.1| Disease resistance protein RGA2, putative [Ricinus communis]
           gi|223539207|gb|EEF40800.1| Disease resistance protein
           RGA2, putative [Ricinus communis]
          Length = 848

 Score =  268 bits (685), Expect = 7e-70
 Identities = 137/188 (72%), Positives = 151/188 (80%), Gaps = 10/188 (5%)
 Frame = +3

Query: 6   DNAWWHRICEGLPKGNGSSVIITTRIEKVARKMGVSEERTHQPKFLSGDNS*LLFRKIAF 185
           D  WW RI EGLPKGNGSS+IITTRIE+VARKMGV+E R H+PKFLS D+S LLFRKIAF
Sbjct: 272 DVNWWRRIYEGLPKGNGSSIIITTRIEEVARKMGVTEVRIHRPKFLSKDDSWLLFRKIAF 331

Query: 186 AETTGECIHSDLESVGKEIVQKCKGLPLAIKAV---------LSEWRRIADNFREELAEN 338
           A T GEC H +LE+VG EIVQKCKGLPLAIKA+           EWR+IA NFR+ELAEN
Sbjct: 332 AATGGECRHPELENVGTEIVQKCKGLPLAIKAIGGLLLYKSHYHEWRQIAGNFRDELAEN 391

Query: 339 DDSVKASLQLSY-ELPSYLKSCFLCFSLYPEDCVISKEQLMHWWIGEDFVPVRNGRLALE 515
           DDSV ASLQLSY ELP YLKSCFL FSLYPEDCVI KEQL+HWWIGE FVP+R GR + E
Sbjct: 392 DDSVMASLQLSYDELPPYLKSCFLSFSLYPEDCVIKKEQLVHWWIGEGFVPLRIGRSSTE 451

Query: 516 VAKICFSG 539
             + CFSG
Sbjct: 452 AGEGCFSG 459


>ref|XP_002327785.1| cc-nbs-lrr resistance protein [Populus trichocarpa]
           gi|222836870|gb|EEE75263.1| cc-nbs-lrr resistance
           protein [Populus trichocarpa]
          Length = 849

 Score =  248 bits (633), Expect = 7e-64
 Identities = 123/188 (65%), Positives = 144/188 (76%), Gaps = 10/188 (5%)
 Frame = +3

Query: 6   DNAWWHRICEGLPKGNGSSVIITTRIEKVARKMGVSEERTHQPKFLSGDNS*LLFRKIAF 185
           D  WW RI EGLPKGNGSSVIITTR+ +V  KM VS+ R H+P  L+ +NS LLFRKIAF
Sbjct: 273 DGNWWSRISEGLPKGNGSSVIITTRLVEVLTKMEVSKARMHKPDILNSNNSWLLFRKIAF 332

Query: 186 AETTGECIHSDLESVGKEIVQKCKGLPLAIKAV---------LSEWRRIADNFREELAEN 338
           A + G+C   +LE +GKEIVQKC GLPLAIKA+           EW+RIADNFR+EL EN
Sbjct: 333 AASGGDCTKPELEKIGKEIVQKCNGLPLAIKAIGGMLLYKSHYHEWKRIADNFRDELGEN 392

Query: 339 DDSVKASLQLSY-ELPSYLKSCFLCFSLYPEDCVISKEQLMHWWIGEDFVPVRNGRLALE 515
           DD+V  SLQLSY ELP YLKSCFL FSLYPEDCV++KEQL+HWWIGE FVP+R+GR + E
Sbjct: 393 DDTVMPSLQLSYDELPPYLKSCFLSFSLYPEDCVVTKEQLVHWWIGEGFVPLRSGRPSTE 452

Query: 516 VAKICFSG 539
             + CFSG
Sbjct: 453 AGEDCFSG 460


>ref|XP_002268940.1| PREDICTED: disease resistance RPP13-like protein 4 [Vitis vinifera]
          Length = 850

 Score =  243 bits (621), Expect = 2e-62
 Identities = 120/188 (63%), Positives = 143/188 (76%), Gaps = 11/188 (5%)
 Frame = +3

Query: 9   NAWWHRICEGLPKGNGSSVIITTRIEKVARKMGVSEERTHQPKFLSGDNS*LLFRKIAFA 188
           N WW +I +GLPKGNGSS+IITTR ++VA  MGV EERTH+PK LS D+S LLFR +AFA
Sbjct: 274 NTWWRKISDGLPKGNGSSIIITTRTKEVATMMGVEEERTHRPKVLSKDDSWLLFRNVAFA 333

Query: 189 ETTGECIHSDLESVGKEIVQKCKGLPLAIKAV----------LSEWRRIADNFREELAEN 338
              G C  S+LE++G+EIV KC GLPLAIKA             +W+RIAD+FR+ELAE 
Sbjct: 334 ANGGICTSSELENIGREIVHKCGGLPLAIKAAGGMMLYQQPYYHDWKRIADHFRDELAEE 393

Query: 339 DDSVKASLQLSY-ELPSYLKSCFLCFSLYPEDCVISKEQLMHWWIGEDFVPVRNGRLALE 515
           D SV ASL+LSY ELPS+LKSCFLC SLYPEDC I+KEQL+HWWI E FVP+R GRL+ E
Sbjct: 394 DGSVMASLELSYEELPSHLKSCFLCLSLYPEDCEITKEQLIHWWIAEGFVPLRRGRLSTE 453

Query: 516 VAKICFSG 539
             + CFSG
Sbjct: 454 AGEDCFSG 461


>emb|CAN63363.1| hypothetical protein VITISV_002407 [Vitis vinifera]
          Length = 850

 Score =  243 bits (620), Expect = 2e-62
 Identities = 120/188 (63%), Positives = 143/188 (76%), Gaps = 11/188 (5%)
 Frame = +3

Query: 9   NAWWHRICEGLPKGNGSSVIITTRIEKVARKMGVSEERTHQPKFLSGDNS*LLFRKIAFA 188
           N WW +I +GLPKGNGSS+IITTR ++VA  MGV EERTH+PK LS D+S LLFR +AFA
Sbjct: 274 NTWWRKISDGLPKGNGSSIIITTRTKEVATMMGVEEERTHRPKVLSKDDSWLLFRNVAFA 333

Query: 189 ETTGECIHSDLESVGKEIVQKCKGLPLAIKAV----------LSEWRRIADNFREELAEN 338
              G C  S+LE++G+EIV KC GLPLAIKA             +W+RIAD+FR+ELAE 
Sbjct: 334 ANGGICTSSELENIGREIVXKCGGLPLAIKAAGGMMLYQQPYYHDWKRIADHFRDELAEE 393

Query: 339 DDSVKASLQLSY-ELPSYLKSCFLCFSLYPEDCVISKEQLMHWWIGEDFVPVRNGRLALE 515
           D SV ASL+LSY ELPS+LKSCFLC SLYPEDC I+KEQL+HWWI E FVP+R GRL+ E
Sbjct: 394 DGSVMASLELSYEELPSHLKSCFLCLSLYPEDCEITKEQLIHWWIAEGFVPLRRGRLSTE 453

Query: 516 VAKICFSG 539
             + CFSG
Sbjct: 454 AGEDCFSG 461


>gb|AAL01025.1|AF402758_1 NBS/LRR resistance protein-like protein [Theobroma cacao]
          Length = 255

 Score =  239 bits (609), Expect = 4e-61
 Identities = 122/172 (70%), Positives = 137/172 (79%), Gaps = 11/172 (6%)
 Frame = +3

Query: 3   EDNAWWHRICEGLPKGNGSSVIITTRIEKVARKMGVSEERTHQPKFLSGDNS*LLFRKIA 182
           ED  WW RIC+GLPKGNGS +IITTRIEKV+RKMGV E R H+PKFL+ D S LLFRKIA
Sbjct: 83  EDVVWWQRICQGLPKGNGSCIIITTRIEKVSRKMGVKEVRIHRPKFLNEDYSWLLFRKIA 142

Query: 183 FAETTGECIHSDLESVGKEIVQKCKGLPLAIKAV----------LSEWRRIADNFREELA 332
           FA + G CI+ DLE VGKEIV+KCKGLPLAIKAV            EWRRIA++FR+EL 
Sbjct: 143 FAASDGNCIYPDLEDVGKEIVEKCKGLPLAIKAVGGMMLCKTPYYREWRRIANHFRDELI 202

Query: 333 ENDDSVKASLQLSY-ELPSYLKSCFLCFSLYPEDCVISKEQLMHWWIGEDFV 485
           END+SV ASLQLSY ELPSYLKSCFL FSLYPEDCVI+KEQL+H WI   F+
Sbjct: 203 ENDNSVMASLQLSYDELPSYLKSCFLSFSLYPEDCVITKEQLVHCWIALGFL 254


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