BLASTX nr result
ID: Coptis21_contig00027747
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis21_contig00027747
(1220 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003631669.1| PREDICTED: pentatricopeptide repeat-containi... 384 e-104
emb|CBI32403.3| unnamed protein product [Vitis vinifera] 384 e-104
ref|XP_003631701.1| PREDICTED: pentatricopeptide repeat-containi... 382 e-104
emb|CAN64990.1| hypothetical protein VITISV_001772 [Vitis vinifera] 381 e-103
ref|XP_004137278.1| PREDICTED: pentatricopeptide repeat-containi... 363 5e-98
>ref|XP_003631669.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33990-like
[Vitis vinifera]
Length = 891
Score = 384 bits (985), Expect = e-104
Identities = 176/221 (79%), Positives = 204/221 (92%)
Frame = +1
Query: 1 HLDMAYDFIQNMPVRPDASVWGALLGACRIHGNVELGALASEHLFEVDIENVGYYVLLSN 180
+L+MAYDFI++MP++PDAS+WGALLGACRIHGN+ELG AS+ LFEVD +NVGYYVLLSN
Sbjct: 671 YLEMAYDFIKDMPLQPDASIWGALLGACRIHGNIELGKFASDRLFEVDSKNVGYYVLLSN 730
Query: 181 IYANVGRWEGVDKVRSLANNRGLKKTPGWSSIEVNNRFGVFYTGNRSHPLSEEIYKELKV 360
IYANVG+WEGVDKVRSLA RGLKKTPGWS+IEVN + VFYTGN+SHP +EIY+EL+V
Sbjct: 731 IYANVGKWEGVDKVRSLARERGLKKTPGWSTIEVNRKVDVFYTGNQSHPKCKEIYEELRV 790
Query: 361 LMAKIKNIGYVPDYSFVLQDVEEDEKEQILTSHSERLAIAFGIISTPPKTPIHIFKNLRV 540
L AK+K++GY+PDYSFVLQDVEEDEKE ILTSHSERLAIAFGIISTPPK+PI IFKNLRV
Sbjct: 791 LTAKMKSLGYIPDYSFVLQDVEEDEKEHILTSHSERLAIAFGIISTPPKSPIRIFKNLRV 850
Query: 541 CGDCHNVTKYISKITERDIVVRDSNRFHHFSNGDCSCGDHW 663
CGDCHN TK+IS+IT+R+IVVRDSNRFHHF +G CSCGD+W
Sbjct: 851 CGDCHNATKFISRITQREIVVRDSNRFHHFKDGICSCGDYW 891
>emb|CBI32403.3| unnamed protein product [Vitis vinifera]
Length = 658
Score = 384 bits (985), Expect = e-104
Identities = 176/221 (79%), Positives = 204/221 (92%)
Frame = +1
Query: 1 HLDMAYDFIQNMPVRPDASVWGALLGACRIHGNVELGALASEHLFEVDIENVGYYVLLSN 180
+L+MAYDFI++MP++PDAS+WGALLGACRIHGN+ELG AS+ LFEVD +NVGYYVLLSN
Sbjct: 438 YLEMAYDFIKDMPLQPDASIWGALLGACRIHGNIELGKFASDRLFEVDSKNVGYYVLLSN 497
Query: 181 IYANVGRWEGVDKVRSLANNRGLKKTPGWSSIEVNNRFGVFYTGNRSHPLSEEIYKELKV 360
IYANVG+WEGVDKVRSLA RGLKKTPGWS+IEVN + VFYTGN+SHP +EIY+EL+V
Sbjct: 498 IYANVGKWEGVDKVRSLARERGLKKTPGWSTIEVNRKVDVFYTGNQSHPKCKEIYEELRV 557
Query: 361 LMAKIKNIGYVPDYSFVLQDVEEDEKEQILTSHSERLAIAFGIISTPPKTPIHIFKNLRV 540
L AK+K++GY+PDYSFVLQDVEEDEKE ILTSHSERLAIAFGIISTPPK+PI IFKNLRV
Sbjct: 558 LTAKMKSLGYIPDYSFVLQDVEEDEKEHILTSHSERLAIAFGIISTPPKSPIRIFKNLRV 617
Query: 541 CGDCHNVTKYISKITERDIVVRDSNRFHHFSNGDCSCGDHW 663
CGDCHN TK+IS+IT+R+IVVRDSNRFHHF +G CSCGD+W
Sbjct: 618 CGDCHNATKFISRITQREIVVRDSNRFHHFKDGICSCGDYW 658
>ref|XP_003631701.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33990-like
[Vitis vinifera]
Length = 848
Score = 382 bits (982), Expect = e-104
Identities = 177/220 (80%), Positives = 199/220 (90%)
Frame = +1
Query: 4 LDMAYDFIQNMPVRPDASVWGALLGACRIHGNVELGALASEHLFEVDIENVGYYVLLSNI 183
L+MAYDFI++MP+ PDAS+WGALLGACRIHGN+ELG AS+ LFEVD ENVGYYVLLSNI
Sbjct: 629 LEMAYDFIKDMPLHPDASIWGALLGACRIHGNIELGKFASDRLFEVDSENVGYYVLLSNI 688
Query: 184 YANVGRWEGVDKVRSLANNRGLKKTPGWSSIEVNNRFGVFYTGNRSHPLSEEIYKELKVL 363
YANVG+WEGVDKVRSLA RGLKKTPGWSSIEVN R +FYTGN+SHP +EIY EL++L
Sbjct: 689 YANVGKWEGVDKVRSLARERGLKKTPGWSSIEVNRRVDIFYTGNQSHPKCKEIYAELRIL 748
Query: 364 MAKIKNIGYVPDYSFVLQDVEEDEKEQILTSHSERLAIAFGIISTPPKTPIHIFKNLRVC 543
AK+K++GY+PDYSFVLQDVEEDEKE ILTSHSERLAIAFGIISTPPK+ I IFKNLRVC
Sbjct: 749 TAKMKSLGYIPDYSFVLQDVEEDEKEHILTSHSERLAIAFGIISTPPKSAIRIFKNLRVC 808
Query: 544 GDCHNVTKYISKITERDIVVRDSNRFHHFSNGDCSCGDHW 663
GDCHN TK+IS+ITER+IVVRDS RFHHF NG CSCGD+W
Sbjct: 809 GDCHNATKFISRITEREIVVRDSKRFHHFKNGICSCGDYW 848
>emb|CAN64990.1| hypothetical protein VITISV_001772 [Vitis vinifera]
Length = 891
Score = 381 bits (978), Expect = e-103
Identities = 175/221 (79%), Positives = 203/221 (91%)
Frame = +1
Query: 1 HLDMAYDFIQNMPVRPDASVWGALLGACRIHGNVELGALASEHLFEVDIENVGYYVLLSN 180
+L+MAY FI++MP++PDAS+WGALLGACRIHGN+ELG AS+ LFEVD +NVGYYVLLSN
Sbjct: 671 YLEMAYGFIKDMPLQPDASIWGALLGACRIHGNIELGKFASDRLFEVDSKNVGYYVLLSN 730
Query: 181 IYANVGRWEGVDKVRSLANNRGLKKTPGWSSIEVNNRFGVFYTGNRSHPLSEEIYKELKV 360
IYANVG+WEGVDKVRSLA RGLKKTPGWS+IEVN + VFYTGN+SHP +EIY+EL+V
Sbjct: 731 IYANVGKWEGVDKVRSLARERGLKKTPGWSTIEVNRKVDVFYTGNQSHPKCKEIYEELRV 790
Query: 361 LMAKIKNIGYVPDYSFVLQDVEEDEKEQILTSHSERLAIAFGIISTPPKTPIHIFKNLRV 540
L AK+K++GY+PDYSFVLQDVEEDEKE ILTSHSERLAIAFGIISTPPK+PI IFKNLRV
Sbjct: 791 LTAKMKSLGYIPDYSFVLQDVEEDEKEHILTSHSERLAIAFGIISTPPKSPIRIFKNLRV 850
Query: 541 CGDCHNVTKYISKITERDIVVRDSNRFHHFSNGDCSCGDHW 663
CGDCHN TK+IS+IT+R+IVVRDSNRFHHF +G CSCGD+W
Sbjct: 851 CGDCHNATKFISRITQREIVVRDSNRFHHFKDGICSCGDYW 891
>ref|XP_004137278.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33990-like
[Cucumis sativus] gi|449476583|ref|XP_004154777.1|
PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Cucumis sativus]
Length = 816
Score = 363 bits (932), Expect = 5e-98
Identities = 168/221 (76%), Positives = 195/221 (88%)
Frame = +1
Query: 1 HLDMAYDFIQNMPVRPDASVWGALLGACRIHGNVELGALASEHLFEVDIENVGYYVLLSN 180
HL+ A++F++NMPVRPD SVWGALLGACRIH NVEL S+HL +V+ ENVGYYVLLSN
Sbjct: 596 HLEKAFNFVKNMPVRPDVSVWGALLGACRIHENVELVRTVSDHLLKVESENVGYYVLLSN 655
Query: 181 IYANVGRWEGVDKVRSLANNRGLKKTPGWSSIEVNNRFGVFYTGNRSHPLSEEIYKELKV 360
IYA +G WEGVD+VRSLA +RGLKKTPGWSSIEV+ + VFYTGN++HP EEIY EL+
Sbjct: 656 IYAKLGHWEGVDEVRSLARDRGLKKTPGWSSIEVDKKIDVFYTGNQTHPKCEEIYSELRN 715
Query: 361 LMAKIKNIGYVPDYSFVLQDVEEDEKEQILTSHSERLAIAFGIISTPPKTPIHIFKNLRV 540
L AK+K+IGYVPDY+FVLQDVE+DEKE ILTSHSERLA+AFGIISTPPKT + IFKNLRV
Sbjct: 716 LTAKMKSIGYVPDYNFVLQDVEDDEKENILTSHSERLAMAFGIISTPPKTTLQIFKNLRV 775
Query: 541 CGDCHNVTKYISKITERDIVVRDSNRFHHFSNGDCSCGDHW 663
CGDCHN TK+ISKITER+I+VRDSNRFHHF +G CSCGD+W
Sbjct: 776 CGDCHNATKFISKITEREIIVRDSNRFHHFKDGVCSCGDYW 816