BLASTX nr result

ID: Coptis21_contig00027733 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00027733
         (552 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI17183.3| unnamed protein product [Vitis vinifera]              108   6e-22
ref|XP_002274452.1| PREDICTED: uncharacterized protein LOC100265...   108   7e-22
ref|XP_002313350.1| predicted protein [Populus trichocarpa] gi|2...    96   4e-18
ref|XP_002318884.1| predicted protein [Populus trichocarpa] gi|2...    89   5e-16
ref|XP_003565040.1| PREDICTED: uncharacterized protein LOC100823...    85   7e-15

>emb|CBI17183.3| unnamed protein product [Vitis vinifera]
          Length = 161

 Score =  108 bits (270), Expect = 6e-22
 Identities = 49/89 (55%), Positives = 61/89 (68%)
 Frame = +2

Query: 26  MLDKSTSTQPTGLKTNVLWGWCFIVFGCMSFLGFIYAAVLSKLLPPSDNPVLSAIQKDRY 205
           +++ S ++Q    K  V WGW F++FG + FLGF+YAAV+SKLLPPS N ++SAIQKDRY
Sbjct: 73  IMNTSITSQFVASKDRVFWGWIFLIFGSIFFLGFLYAAVISKLLPPSGNVIISAIQKDRY 132

Query: 206 YCXXXXXXXXXXXXXXYFHWLSMKLFKHA 292
           YC              YFHWLSMKLFKHA
Sbjct: 133 YCFLVPLTIPILIVAVYFHWLSMKLFKHA 161


>ref|XP_002274452.1| PREDICTED: uncharacterized protein LOC100265449 [Vitis vinifera]
          Length = 88

 Score =  108 bits (269), Expect = 7e-22
 Identities = 49/88 (55%), Positives = 60/88 (68%)
 Frame = +2

Query: 29  LDKSTSTQPTGLKTNVLWGWCFIVFGCMSFLGFIYAAVLSKLLPPSDNPVLSAIQKDRYY 208
           ++ S ++Q    K  V WGW F++FG + FLGF+YAAV+SKLLPPS N ++SAIQKDRYY
Sbjct: 1   MNTSITSQFVASKDRVFWGWIFLIFGSIFFLGFLYAAVISKLLPPSGNVIISAIQKDRYY 60

Query: 209 CXXXXXXXXXXXXXXYFHWLSMKLFKHA 292
           C              YFHWLSMKLFKHA
Sbjct: 61  CFLVPLTIPILIVAVYFHWLSMKLFKHA 88


>ref|XP_002313350.1| predicted protein [Populus trichocarpa] gi|222849758|gb|EEE87305.1|
           predicted protein [Populus trichocarpa]
          Length = 85

 Score = 95.9 bits (237), Expect = 4e-18
 Identities = 43/76 (56%), Positives = 53/76 (69%)
 Frame = +2

Query: 65  KTNVLWGWCFIVFGCMSFLGFIYAAVLSKLLPPSDNPVLSAIQKDRYYCXXXXXXXXXXX 244
           +T    GW FI+ G +SF+GF++AAV+SKLLP SDNP++SAIQ DRYYC           
Sbjct: 10  ETATFRGWLFILMGSVSFVGFLFAAVISKLLPLSDNPIISAIQNDRYYCFLVPLTLPILV 69

Query: 245 XXXYFHWLSMKLFKHA 292
              YFHWLSMK+FKHA
Sbjct: 70  SAVYFHWLSMKMFKHA 85


>ref|XP_002318884.1| predicted protein [Populus trichocarpa] gi|222859557|gb|EEE97104.1|
           predicted protein [Populus trichocarpa]
          Length = 80

 Score = 89.0 bits (219), Expect = 5e-16
 Identities = 42/76 (55%), Positives = 50/76 (65%)
 Frame = +2

Query: 65  KTNVLWGWCFIVFGCMSFLGFIYAAVLSKLLPPSDNPVLSAIQKDRYYCXXXXXXXXXXX 244
           KT    GW  I+ G +SF+GF+ AAV+SKLLP SD+P++SAIQ DRYYC           
Sbjct: 5   KTATFSGWLLILIGSVSFVGFLSAAVISKLLPLSDSPIISAIQNDRYYCFLVPLTLPILI 64

Query: 245 XXXYFHWLSMKLFKHA 292
              Y HWLSMKLFKHA
Sbjct: 65  IAVYSHWLSMKLFKHA 80


>ref|XP_003565040.1| PREDICTED: uncharacterized protein LOC100823748 [Brachypodium
           distachyon]
          Length = 79

 Score = 85.1 bits (209), Expect = 7e-15
 Identities = 40/72 (55%), Positives = 47/72 (65%)
 Frame = +2

Query: 77  LWGWCFIVFGCMSFLGFIYAAVLSKLLPPSDNPVLSAIQKDRYYCXXXXXXXXXXXXXXY 256
           L G  F+ FG + F+GF YAAV+SKLLPP +N +LSAIQ DRYYC              Y
Sbjct: 8   LVGSAFVAFGILLFVGFFYAAVVSKLLPPYENRLLSAIQNDRYYCLLVPLTLPVIIVAVY 67

Query: 257 FHWLSMKLFKHA 292
            HWLSMK+FKHA
Sbjct: 68  LHWLSMKMFKHA 79


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