BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00027725
         (254 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002513633.1| pentatricopeptide repeat-containing protein,...   114   1e-23
ref|XP_002274427.1| PREDICTED: pentatricopeptide repeat-containi...   112   2e-23
ref|XP_002305943.1| predicted protein [Populus trichocarpa] gi|2...   107   8e-22
ref|XP_003592182.1| Pentatricopeptide repeat-containing protein ...   103   2e-20
ref|XP_003535591.1| PREDICTED: pentatricopeptide repeat-containi...   102   3e-20

>ref|XP_002513633.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223547541|gb|EEF49036.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 777

 Score =  114 bits (284), Expect = 1e-23
 Identities = 53/68 (77%), Positives = 58/68 (85%)
 Frame = +2

Query: 50  EDMRLAGIHPDEITFLLVLYTCSHGGLVDRGLEYFHSMSETYRIVPQPDHYVCLVDLLGR 229
           +DMRL GI PD ITFLLVL TCSHGGLVD GL+YFHSM E + + PQ DHYVCLVD+LGR
Sbjct: 614 DDMRLRGIQPDSITFLLVLSTCSHGGLVDMGLQYFHSMREMHDVEPQSDHYVCLVDILGR 673

Query: 230 AGRLEEAM 253
           AGRLEEAM
Sbjct: 674 AGRLEEAM 681


>ref|XP_002274427.1| PREDICTED: pentatricopeptide repeat-containing protein At5g52850,
           chloroplastic [Vitis vinifera]
           gi|302143764|emb|CBI22625.3| unnamed protein product
           [Vitis vinifera]
          Length = 880

 Score =  112 bits (281), Expect = 2e-23
 Identities = 54/68 (79%), Positives = 58/68 (85%)
 Frame = +2

Query: 50  EDMRLAGIHPDEITFLLVLYTCSHGGLVDRGLEYFHSMSETYRIVPQPDHYVCLVDLLGR 229
           EDMRLAG+ PD+IT LLVLY CSHGGLVD GL+YF SM E + I PQ DHYVCLVDLLGR
Sbjct: 610 EDMRLAGVEPDQITCLLVLYACSHGGLVDMGLDYFQSMREKHGIRPQLDHYVCLVDLLGR 669

Query: 230 AGRLEEAM 253
           AGRLEEAM
Sbjct: 670 AGRLEEAM 677


>ref|XP_002305943.1| predicted protein [Populus trichocarpa] gi|222848907|gb|EEE86454.1|
           predicted protein [Populus trichocarpa]
          Length = 693

 Score =  107 bits (268), Expect = 8e-22
 Identities = 50/68 (73%), Positives = 57/68 (83%)
 Frame = +2

Query: 50  EDMRLAGIHPDEITFLLVLYTCSHGGLVDRGLEYFHSMSETYRIVPQPDHYVCLVDLLGR 229
           +DMRL G+ PD +TFLLVL+TC+H GLVD GLEYF+SM E + I PQ DHYVCL DLLGR
Sbjct: 535 DDMRLTGVKPDSVTFLLVLFTCTHCGLVDMGLEYFNSMKEMHGIEPQLDHYVCLFDLLGR 594

Query: 230 AGRLEEAM 253
           AGRLEEAM
Sbjct: 595 AGRLEEAM 602


>ref|XP_003592182.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355481230|gb|AES62433.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 912

 Score =  103 bits (256), Expect = 2e-20
 Identities = 46/68 (67%), Positives = 55/68 (80%)
 Frame = +2

Query: 50  EDMRLAGIHPDEITFLLVLYTCSHGGLVDRGLEYFHSMSETYRIVPQPDHYVCLVDLLGR 229
           +DMRLAG+ PD IT L ++  CSHGGL++ GLEYFHSM + Y I P+ DHY+CLVDLLGR
Sbjct: 611 DDMRLAGVKPDSITLLSLISACSHGGLLELGLEYFHSMQKEYHITPKLDHYMCLVDLLGR 670

Query: 230 AGRLEEAM 253
            GRLEEAM
Sbjct: 671 GGRLEEAM 678


>ref|XP_003535591.1| PREDICTED: pentatricopeptide repeat-containing protein At5g52850,
           chloroplastic-like [Glycine max]
          Length = 903

 Score =  102 bits (254), Expect = 3e-20
 Identities = 44/68 (64%), Positives = 57/68 (83%)
 Frame = +2

Query: 50  EDMRLAGIHPDEITFLLVLYTCSHGGLVDRGLEYFHSMSETYRIVPQPDHYVCLVDLLGR 229
           +DMRLAG+ PD +TFL +++ CS G L+++GL+YF+SM +TY I P+ DHYVCLVDLLGR
Sbjct: 613 DDMRLAGVKPDSVTFLSLIFACSQGSLLNQGLDYFYSMEKTYHITPKLDHYVCLVDLLGR 672

Query: 230 AGRLEEAM 253
            GRLEEAM
Sbjct: 673 GGRLEEAM 680