BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00027723
         (478 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264130.2| PREDICTED: pentatricopeptide repeat-containi...   262   2e-68
emb|CBI24193.3| unnamed protein product [Vitis vinifera]              262   2e-68
emb|CAN60118.1| hypothetical protein VITISV_016374 [Vitis vinifera]   262   2e-68
ref|XP_002310674.1| predicted protein [Populus trichocarpa] gi|2...   242   2e-62
ref|XP_004149965.1| PREDICTED: pentatricopeptide repeat-containi...   238   3e-61

>ref|XP_002264130.2| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
            [Vitis vinifera]
          Length = 1724

 Score =  262 bits (669), Expect = 2e-68
 Identities = 123/158 (77%), Positives = 138/158 (87%)
 Frame = +3

Query: 3    DMYGKCGEMEEVLQMLPAPSNRSRLSWNILISGFSRHGYFEKARDTFRHMLQVGSRPDHV 182
            DMYGKCGEM +VL+MLP P NRSRLSWNILIS F+RHG F+KAR+TF  ML++G +PDHV
Sbjct: 1395 DMYGKCGEMHDVLKMLPQPINRSRLSWNILISAFARHGCFQKARETFHEMLKLGPKPDHV 1454

Query: 183  TFVSLLSACNHGGLVEEGLAHYASMTKEFGVPPGIEHCVCIIDLLGRSGRLNDAEKFVKE 362
            TFVSLLSACNHGGLV+EGLA+Y SMT+EFGV PGIEHCVCIIDLLGRSGRL+ AE F+KE
Sbjct: 1455 TFVSLLSACNHGGLVDEGLAYYDSMTREFGVFPGIEHCVCIIDLLGRSGRLSHAEGFIKE 1514

Query: 363  MPVPPNDLVWRSLLSASRTHNNMGLGRKAANHLLELDP 476
            MPVPPNDL WRSLL+A R H N+ L RK A HLLELDP
Sbjct: 1515 MPVPPNDLAWRSLLAACRIHGNLELARKTAEHLLELDP 1552



 Score =  120 bits (300), Expect = 1e-25
 Identities = 56/158 (35%), Positives = 92/158 (58%)
 Frame = +3

Query: 3   DMYGKCGEMEEVLQMLPAPSNRSRLSWNILISGFSRHGYFEKARDTFRHMLQVGSRPDHV 182
           DMY K GE+E+  +       ++ +SW  LISG+++HGY   A   ++ M   G +P+ V
Sbjct: 377 DMYAKSGEIEDAKRAFDEMEEKNVISWTSLISGYAKHGYGHMAVSLYKKMESKGFKPNDV 436

Query: 183 TFVSLLSACNHGGLVEEGLAHYASMTKEFGVPPGIEHCVCIIDLLGRSGRLNDAEKFVKE 362
           TF+SLL AC+H GL  EG   + +M  ++ + P  EH  C++DL  R G L +A   + +
Sbjct: 437 TFLSLLFACSHTGLTAEGCECFNNMVNKYNIKPRAEHYSCMVDLFARQGLLEEAYNLLCK 496

Query: 363 MPVPPNDLVWRSLLSASRTHNNMGLGRKAANHLLELDP 476
           + +  N  +W ++L AS  +  M LG++AA++L  + P
Sbjct: 497 IDIKHNASLWGAILGASSIYGYMSLGKEAASNLFNMQP 534



 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 42/157 (26%), Positives = 75/157 (47%)
 Frame = +3

Query: 6    MYGKCGEMEEVLQMLPAPSNRSRLSWNILISGFSRHGYFEKARDTFRHMLQVGSRPDHVT 185
            MY KCG++     +     N+S ++WN +++  + HG  E+A   F  M  VG   D  +
Sbjct: 1295 MYAKCGDLNSSNYIFDGLGNKSPITWNAMVAANAHHGCGEEALKIFGEMRNVGVNLDQFS 1354

Query: 186  FVSLLSACNHGGLVEEGLAHYASMTKEFGVPPGIEHCVCIIDLLGRSGRLNDAEKFVKEM 365
            F   L+A  +  ++EEG   +  + K  G    +      +D+ G+ G ++D  K + + 
Sbjct: 1355 FSGGLAATANLAVLEEGQQLHGLVIK-LGFESDLHVTNAAMDMYGKCGEMHDVLKMLPQ- 1412

Query: 366  PVPPNDLVWRSLLSASRTHNNMGLGRKAANHLLELDP 476
            P+  + L W  L+SA   H      R+  + +L+L P
Sbjct: 1413 PINRSRLSWNILISAFARHGCFQKARETFHEMLKLGP 1449



 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 40/145 (27%), Positives = 70/145 (48%), Gaps = 1/145 (0%)
 Frame = +3

Query: 3    DMYGKCGEMEEVLQMLPAPSNRSRLSWNILISGFSRHGYFEKARDTFRHMLQVGSRPDHV 182
            +MY K G +E    +     +R+  SW+ ++SG+ R G +E+A   F  M  +G  P+  
Sbjct: 787  NMYSKFGNIEHARYVFDEMRHRNEASWSTMLSGYVRVGLYEEAVGLFCQMWGLGVEPNGF 846

Query: 183  TFVSLLSACNHGG-LVEEGLAHYASMTKEFGVPPGIEHCVCIIDLLGRSGRLNDAEKFVK 359
               SL++AC+  G + +EG   +  + K  G+   +     ++   G  G + +A+K  +
Sbjct: 847  MVASLITACSRSGYMADEGFQVHGFVVKT-GILGDVYVGTALVHFYGSIGLVYNAQKLFE 905

Query: 360  EMPVPPNDLVWRSLLSASRTHNNMG 434
            EMP   N + W SL+       N G
Sbjct: 906  EMP-DHNVVSWTSLMVGYSDSGNPG 929


>emb|CBI24193.3| unnamed protein product [Vitis vinifera]
          Length = 1083

 Score =  262 bits (669), Expect = 2e-68
 Identities = 123/158 (77%), Positives = 138/158 (87%)
 Frame = +3

Query: 3    DMYGKCGEMEEVLQMLPAPSNRSRLSWNILISGFSRHGYFEKARDTFRHMLQVGSRPDHV 182
            DMYGKCGEM +VL+MLP P NRSRLSWNILIS F+RHG F+KAR+TF  ML++G +PDHV
Sbjct: 754  DMYGKCGEMHDVLKMLPQPINRSRLSWNILISAFARHGCFQKARETFHEMLKLGPKPDHV 813

Query: 183  TFVSLLSACNHGGLVEEGLAHYASMTKEFGVPPGIEHCVCIIDLLGRSGRLNDAEKFVKE 362
            TFVSLLSACNHGGLV+EGLA+Y SMT+EFGV PGIEHCVCIIDLLGRSGRL+ AE F+KE
Sbjct: 814  TFVSLLSACNHGGLVDEGLAYYDSMTREFGVFPGIEHCVCIIDLLGRSGRLSHAEGFIKE 873

Query: 363  MPVPPNDLVWRSLLSASRTHNNMGLGRKAANHLLELDP 476
            MPVPPNDL WRSLL+A R H N+ L RK A HLLELDP
Sbjct: 874  MPVPPNDLAWRSLLAACRIHGNLELARKTAEHLLELDP 911



 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 37/139 (26%), Positives = 65/139 (46%), Gaps = 1/139 (0%)
 Frame = +3

Query: 21  GEMEEVLQMLPAPSNRSRLSWNILISGFSRHGYFEKARDTFRHMLQVGSRPDHVTFVSLL 200
           G M     +     +R+  SW+ ++SG+ R G +E+A   F  M  +G  P+     SL+
Sbjct: 322 GHMAHARYVFDEMRHRNEASWSTMLSGYVRVGLYEEAVGLFCQMWGLGVEPNGFMVASLI 381

Query: 201 SACNHGG-LVEEGLAHYASMTKEFGVPPGIEHCVCIIDLLGRSGRLNDAEKFVKEMPVPP 377
           +AC+  G + +EG   +  + K  G+   +     ++   G  G + +A+K  +EMP   
Sbjct: 382 TACSRSGYMADEGFQVHGFVVKT-GILGDVYVGTALVHFYGSIGLVYNAQKLFEEMP-DH 439

Query: 378 NDLVWRSLLSASRTHNNMG 434
           N + W SL+       N G
Sbjct: 440 NVVSWTSLMVGYSDSGNPG 458



 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 39/155 (25%), Positives = 74/155 (47%)
 Frame = +3

Query: 12   GKCGEMEEVLQMLPAPSNRSRLSWNILISGFSRHGYFEKARDTFRHMLQVGSRPDHVTFV 191
            GKC +  ++L  L       R++WN LI G + +    +A   ++ + + G   +++T V
Sbjct: 657  GKCLDGLKILAELLQMGKPDRVTWNALIGGHAENEEPNEAVKAYKLIREKGIPANYITMV 716

Query: 192  SLLSACNHGGLVEEGLAHYASMTKEFGVPPGIEHCVCIIDLLGRSGRLNDAEKFVKEMPV 371
            SL +  N   ++EEG   +  + K  G    +      +D+ G+ G ++D  K + + P+
Sbjct: 717  SLAATANL-AVLEEGQQLHGLVIK-LGFESDLHVTNAAMDMYGKCGEMHDVLKMLPQ-PI 773

Query: 372  PPNDLVWRSLLSASRTHNNMGLGRKAANHLLELDP 476
              + L W  L+SA   H      R+  + +L+L P
Sbjct: 774  NRSRLSWNILISAFARHGCFQKARETFHEMLKLGP 808


>emb|CAN60118.1| hypothetical protein VITISV_016374 [Vitis vinifera]
          Length = 1166

 Score =  262 bits (669), Expect = 2e-68
 Identities = 123/158 (77%), Positives = 138/158 (87%)
 Frame = +3

Query: 3    DMYGKCGEMEEVLQMLPAPSNRSRLSWNILISGFSRHGYFEKARDTFRHMLQVGSRPDHV 182
            DMYGKCGEM +VL+MLP P NRSRLSWNILIS F+RHG F+KAR+TF  ML++G +PDHV
Sbjct: 745  DMYGKCGEMHDVLKMLPQPINRSRLSWNILISAFARHGCFQKARETFHEMLKLGPKPDHV 804

Query: 183  TFVSLLSACNHGGLVEEGLAHYASMTKEFGVPPGIEHCVCIIDLLGRSGRLNDAEKFVKE 362
            TFVSLLSACNHGGLV+EGLA+Y SMT+EFGV PGIEHCVCIIDLLGRSGRL+ AE F+KE
Sbjct: 805  TFVSLLSACNHGGLVDEGLAYYDSMTREFGVFPGIEHCVCIIDLLGRSGRLSHAEGFIKE 864

Query: 363  MPVPPNDLVWRSLLSASRTHNNMGLGRKAANHLLELDP 476
            MPVPPNDL WRSLL+A R H N+ L RK A HLLELDP
Sbjct: 865  MPVPPNDLAWRSLLAACRIHGNLELARKTAEHLLELDP 902



 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 42/157 (26%), Positives = 75/157 (47%)
 Frame = +3

Query: 6    MYGKCGEMEEVLQMLPAPSNRSRLSWNILISGFSRHGYFEKARDTFRHMLQVGSRPDHVT 185
            MY KCG++     +     N+S ++WN +++  + HG  E+A   F  M  VG   D  +
Sbjct: 645  MYAKCGDLNSSNYIFDGLGNKSPITWNAMVAANAHHGCGEEALKIFGEMRNVGVNLDQFS 704

Query: 186  FVSLLSACNHGGLVEEGLAHYASMTKEFGVPPGIEHCVCIIDLLGRSGRLNDAEKFVKEM 365
            F   L+A  +  ++EEG   +  + K  G    +      +D+ G+ G ++D  K + + 
Sbjct: 705  FSGGLAATANLAVLEEGQQLHGLVIK-LGFESDLHVTNAAMDMYGKCGEMHDVLKMLPQ- 762

Query: 366  PVPPNDLVWRSLLSASRTHNNMGLGRKAANHLLELDP 476
            P+  + L W  L+SA   H      R+  + +L+L P
Sbjct: 763  PINRSRLSWNILISAFARHGCFQKARETFHEMLKLGP 799



 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 40/145 (27%), Positives = 70/145 (48%), Gaps = 1/145 (0%)
 Frame = +3

Query: 3   DMYGKCGEMEEVLQMLPAPSNRSRLSWNILISGFSRHGYFEKARDTFRHMLQVGSRPDHV 182
           +MY K G +E    +     +R+  SW+ ++SG+ R G +E+A   F  M  +G  P+  
Sbjct: 137 NMYSKFGNIEHARYVFDEMRHRNEASWSTMLSGYVRVGLYEEAVGLFCQMWGLGVEPNGF 196

Query: 183 TFVSLLSACNHGG-LVEEGLAHYASMTKEFGVPPGIEHCVCIIDLLGRSGRLNDAEKFVK 359
              SL++AC+  G + +EG   +  + K  G+   +     ++   G  G + +A+K  +
Sbjct: 197 MVASLITACSRSGYMADEGFQVHGFVVKT-GILGDVYVGTALVHFYGSIGLVYNAQKLFE 255

Query: 360 EMPVPPNDLVWRSLLSASRTHNNMG 434
           EMP   N + W SL+       N G
Sbjct: 256 EMP-DHNVVSWTSLMVGYSDSGNPG 279


>ref|XP_002310674.1| predicted protein [Populus trichocarpa] gi|222853577|gb|EEE91124.1|
            predicted protein [Populus trichocarpa]
          Length = 908

 Score =  242 bits (618), Expect = 2e-62
 Identities = 111/158 (70%), Positives = 134/158 (84%)
 Frame = +3

Query: 3    DMYGKCGEMEEVLQMLPAPSNRSRLSWNILISGFSRHGYFEKARDTFRHMLQVGSRPDHV 182
            DMYGKCGE+++VL+++P P NRSRLSWNIL S FSRHG+FEKA++TF  M+ +G +PDHV
Sbjct: 579  DMYGKCGEIDDVLRIIPRPINRSRLSWNILTSSFSRHGFFEKAKETFHEMINLGVKPDHV 638

Query: 183  TFVSLLSACNHGGLVEEGLAHYASMTKEFGVPPGIEHCVCIIDLLGRSGRLNDAEKFVKE 362
            TFVSLLSAC+HGG+VEEGLA+Y SM KEFG+P  I HCVCIIDLLGRSGR  +AE F+KE
Sbjct: 639  TFVSLLSACSHGGMVEEGLAYYDSMIKEFGIPAKIGHCVCIIDLLGRSGRFAEAETFIKE 698

Query: 363  MPVPPNDLVWRSLLSASRTHNNMGLGRKAANHLLELDP 476
            MPV P D VWRSLL+A +TH N+ LGRKA  +LL+LDP
Sbjct: 699  MPVSPTDHVWRSLLAACKTHGNLELGRKAVENLLKLDP 736



 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 33/155 (21%), Positives = 68/155 (43%)
 Frame = +3

Query: 6   MYGKCGEMEEVLQMLPAPSNRSRLSWNILISGFSRHGYFEKARDTFRHMLQVGSRPDHVT 185
           MY KCG++     +    ++++  +WN +++  + HG+ E+A      M + G   D  +
Sbjct: 479 MYAKCGDLNSSNNIFDRLTSKNASAWNAMMAANAHHGHMEEALKFLLEMRRAGVNVDEFS 538

Query: 186 FVSLLSACNHGGLVEEGLAHYASMTKEFGVPPGIEHCVCIIDLLGRSGRLNDAEKFVKEM 365
           F   L+A     ++EEG   +    K  G           +D+ G+ G ++D  + +   
Sbjct: 539 FSECLAAAAKLAILEEGQQLHGLAVK-LGCDSNPFVASATMDMYGKCGEIDDVLRIIPR- 596

Query: 366 PVPPNDLVWRSLLSASRTHNNMGLGRKAANHLLEL 470
           P+  + L W  L S+   H      ++  + ++ L
Sbjct: 597 PINRSRLSWNILTSSFSRHGFFEKAKETFHEMINL 631


>ref|XP_004149965.1| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
            [Cucumis sativus] gi|449497665|ref|XP_004160467.1|
            PREDICTED: pentatricopeptide repeat-containing protein
            At4g13650-like [Cucumis sativus]
          Length = 938

 Score =  238 bits (608), Expect = 3e-61
 Identities = 108/158 (68%), Positives = 136/158 (86%)
 Frame = +3

Query: 3    DMYGKCGEMEEVLQMLPAPSNRSRLSWNILISGFSRHGYFEKARDTFRHMLQVGSRPDHV 182
            DMYGKCGE+++ L++LP P++RSRLSWN LIS  +RHG F KA++TF  ML++G +P+HV
Sbjct: 609  DMYGKCGELDDALRILPQPTDRSRLSWNTLISISARHGQFHKAKETFHDMLKLGVKPNHV 668

Query: 183  TFVSLLSACNHGGLVEEGLAHYASMTKEFGVPPGIEHCVCIIDLLGRSGRLNDAEKFVKE 362
            +FV LLSAC+HGGLV+EGLA+YASMT  +G+ PGIEHCVC+IDLLGRSGRL +AE F+ E
Sbjct: 669  SFVCLLSACSHGGLVDEGLAYYASMTSVYGIQPGIEHCVCMIDLLGRSGRLVEAEAFITE 728

Query: 363  MPVPPNDLVWRSLLSASRTHNNMGLGRKAANHLLELDP 476
            MP+PPNDLVWRSLL++ R + N+ LGRKAA HLLELDP
Sbjct: 729  MPIPPNDLVWRSLLASCRIYRNLDLGRKAAKHLLELDP 766



 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 39/157 (24%), Positives = 73/157 (46%), Gaps = 2/157 (1%)
 Frame = +3

Query: 6   MYGKCGEMEEVLQMLPAPSNRSRLSWNILISGFSRHGYFEKARDTFRHMLQVGSRPDHVT 185
           MY KCG++     +      ++   WN +I+  +R+G+ E+A      M   G   D   
Sbjct: 509 MYAKCGDLHSSSYIFDQLVFKTSSVWNAIIAANARYGFGEEALKLVVRMRSAGIEFDQFN 568

Query: 186 FVSLLSACNHGGLVEEGLAHYASMTKEFGVPPGIEHCV--CIIDLLGRSGRLNDAEKFVK 359
           F + LS      ++EEG   + S  K   +   ++H +    +D+ G+ G L+DA + + 
Sbjct: 569 FSTALSVAADLAMLEEGQQLHGSTIK---LGFELDHFIINAAMDMYGKCGELDDALRILP 625

Query: 360 EMPVPPNDLVWRSLLSASRTHNNMGLGRKAANHLLEL 470
           + P   + L W +L+S S  H      ++  + +L+L
Sbjct: 626 Q-PTDRSRLSWNTLISISARHGQFHKAKETFHDMLKL 661



 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 37/135 (27%), Positives = 64/135 (47%), Gaps = 1/135 (0%)
 Frame = +3

Query: 6   MYGKCGEMEEVLQMLPAPSNRSRLSWNILISGFSRHGYFEKARDTFRHMLQVGSRPDHVT 185
           M+G CG++ E   +    + R  +SWN +IS  +++   E++   F  M  V    ++ T
Sbjct: 204 MFGGCGDINEACSIFNEMNERDTISWNSIISANAQNTLHEESFRYFHWMRLVHEEINYTT 263

Query: 186 FVSLLSACNHGGLVEEGLAHYASMTKEFGVPPGIEHCVCIIDLLGRSGRLNDAEKFVKEM 365
              LLS C     ++ G   +    K +G+   I  C  ++ +   +GR  DAE   + M
Sbjct: 264 LSILLSICGSVDYLKWGKGVHGLAVK-YGLESNICLCNTLLSVYSDAGRSKDAELIFRRM 322

Query: 366 PVPPNDLV-WRSLLS 407
             P  DL+ W S+L+
Sbjct: 323 --PERDLISWNSMLA 335