BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00027722
         (449 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631701.1| PREDICTED: pentatricopeptide repeat-containi...   228   3e-58
ref|XP_003631669.1| PREDICTED: pentatricopeptide repeat-containi...   225   3e-57
emb|CBI32403.3| unnamed protein product [Vitis vinifera]              225   3e-57
emb|CAN64990.1| hypothetical protein VITISV_001772 [Vitis vinifera]   224   6e-57
ref|XP_002300569.1| predicted protein [Populus trichocarpa] gi|2...   224   7e-57

>ref|XP_003631701.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33990-like [Vitis vinifera]
          Length = 848

 Score =  228 bits (582), Expect = 3e-58
 Identities = 108/148 (72%), Positives = 128/148 (86%)
 Frame = +3

Query: 6   VSILPAYSHVGALRQGMKVHGHTVKIGLLSDIYVGTCLIDVYAKCGRLNDAMLLFKQVPR 185
           VSIL AY+HVGAL+QGM++HGH +K  L  D++VGTCLID+Y KCGRL DAM LF QVPR
Sbjct: 481 VSILAAYAHVGALQQGMRIHGHLIKTNLHLDVFVGTCLIDLYGKCGRLVDAMCLFYQVPR 540

Query: 186 KSSVPWNAIISGHGIHGQGEKSLSLFGEMEEEGVKPDHVTFVSLLSACSHAGLIDQGQQC 365
           +SSVPWNAIIS HGIHG GEK+L LF EM++EGVKPDHVTF+SLLSACSH+GL+D+G+  
Sbjct: 541 ESSVPWNAIISCHGIHGHGEKALKLFREMQDEGVKPDHVTFISLLSACSHSGLVDEGKWF 600

Query: 366 FKLMQEKYCIQPGLKHFGCIVDLLGRAG 449
           F LMQE Y I+P LKH+GC+VDLLGRAG
Sbjct: 601 FHLMQE-YGIKPSLKHYGCMVDLLGRAG 627



 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 46/156 (29%), Positives = 82/156 (52%), Gaps = 7/156 (4%)
 Frame = +3

Query: 3   LVSILPAYSHVGALRQGMKVHGHTVKIG-LLSDIYVGTCLIDVYAKCGRLNDAMLLFKQV 179
           LVS+    +     +    VHG  ++ G L+  + +G  ++D+YAK G ++ A  +F  +
Sbjct: 377 LVSLASIAAQSRDYKNSRSVHGFIMRRGWLMEAVVIGNAVMDMYAKLGVIDSAHKVFNLI 436

Query: 180 PRKSSVPWNAIISGHGIHGQGEKSLSLFGEMEE-EGVKPDHVTFVSLLSACSHAGLIDQG 356
           P K  V WN +ISG+  +G   +++ ++  MEE   +K +  T+VS+L+A +H G + QG
Sbjct: 437 PVKDVVSWNTLISGYTQNGLASEAIEVYRMMEECREIKLNQGTWVSILAAYAHVGALQQG 496

Query: 357 QQCFKLMQEKYCIQPGLKHFG-----CIVDLLGRAG 449
            +        + I+  L H       C++DL G+ G
Sbjct: 497 MRI-----HGHLIKTNL-HLDVFVGTCLIDLYGKCG 526



 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 36/112 (32%), Positives = 64/112 (57%)
 Frame = +3

Query: 3   LVSILPAYSHVGALRQGMKVHGHTVKIGLLSDIYVGTCLIDVYAKCGRLNDAMLLFKQVP 182
           + SILP  + +G +     +H + +K GL  +++V   LI++YAK G L DA  +F+Q+ 
Sbjct: 276 VASILPVCAQLGDISTATLIHLYVIKHGLEFELFVSNALINMYAKFGNLGDAQKVFQQMF 335

Query: 183 RKSSVPWNAIISGHGIHGQGEKSLSLFGEMEEEGVKPDHVTFVSLLSACSHA 338
            +  V WN+II+ +  +     +   F +M+  G++PD +T VSL S  + +
Sbjct: 336 LRDVVSWNSIIAAYEQNDDPVTARGFFFKMQLNGLEPDLLTLVSLASIAAQS 387



 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 36/108 (33%), Positives = 54/108 (50%)
 Frame = +3

Query: 18  PAYSHVGALRQGMKVHGHTVKIGLLSDIYVGTCLIDVYAKCGRLNDAMLLFKQVPRKSSV 197
           P       L  G K+H    K+G   D++V   LI +Y++ G +  A  LF  +P +   
Sbjct: 180 PVLKACQTLVDGRKIHCWVFKLGFQWDVFVAASLIHMYSRFGFVGIARSLFDDMPFRDMG 239

Query: 198 PWNAIISGHGIHGQGEKSLSLFGEMEEEGVKPDHVTFVSLLSACSHAG 341
            WNA+ISG   +G   ++L +  EM  EG+  D VT  S+L  C+  G
Sbjct: 240 SWNAMISGLIQNGNAAQALDVLDEMRLEGINMDSVTVASILPVCAQLG 287


>ref|XP_003631669.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33990-like [Vitis vinifera]
          Length = 891

 Score =  225 bits (574), Expect = 3e-57
 Identities = 107/148 (72%), Positives = 126/148 (85%)
 Frame = +3

Query: 6   VSILPAYSHVGALRQGMKVHGHTVKIGLLSDIYVGTCLIDVYAKCGRLNDAMLLFKQVPR 185
           VSILPAY+HVGAL+QGMK+HG  +K  L  D++V TCLIDVY KCGRL DAM LF QVP+
Sbjct: 524 VSILPAYAHVGALQQGMKIHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQ 583

Query: 186 KSSVPWNAIISGHGIHGQGEKSLSLFGEMEEEGVKPDHVTFVSLLSACSHAGLIDQGQQC 365
           +SSV WNAIIS HGIHG  EK+L LFGEM +EGVKPDHVTFVSLLSACSH+G +++G+ C
Sbjct: 584 ESSVTWNAIISCHGIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGKWC 643

Query: 366 FKLMQEKYCIQPGLKHFGCIVDLLGRAG 449
           F+LMQE Y I+P LKH+GC+VDLLGRAG
Sbjct: 644 FRLMQE-YGIKPSLKHYGCMVDLLGRAG 670



 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 43/151 (28%), Positives = 83/151 (54%), Gaps = 2/151 (1%)
 Frame = +3

Query: 3   LVSILPAYSHVGALRQGMKVHGHTVKIG-LLSDIYVGTCLIDVYAKCGRLNDAMLLFKQV 179
           LVS+    +     +    VHG  ++ G L+ D+ +G  ++D+YAK G L+ A  +F+ +
Sbjct: 420 LVSLASIVAQSRDCKNSRSVHGFIMRRGWLMEDVVIGNAVVDMYAKLGLLDSAHKVFEII 479

Query: 180 PRKSSVPWNAIISGHGIHGQGEKSLSLFGEMEE-EGVKPDHVTFVSLLSACSHAGLIDQG 356
           P K  + WN +I+G+  +G   +++ ++  MEE + + P+  T+VS+L A +H G + QG
Sbjct: 480 PVKDVISWNTLITGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHVGALQQG 539

Query: 357 QQCFKLMQEKYCIQPGLKHFGCIVDLLGRAG 449
            +    +  K  +   +    C++D+ G+ G
Sbjct: 540 MKIHGRV-IKTNLHLDVFVATCLIDVYGKCG 569



 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 41/121 (33%), Positives = 65/121 (53%)
 Frame = +3

Query: 3   LVSILPAYSHVGALRQGMKVHGHTVKIGLLSDIYVGTCLIDVYAKCGRLNDAMLLFKQVP 182
           +VSILP    +G +   M +H + +K GL  D++V   LI++YAK G L DA   F+Q+ 
Sbjct: 319 VVSILPVCPQLGDISTAMLIHLYVIKHGLEFDLFVSNALINMYAKFGNLEDARKAFQQMF 378

Query: 183 RKSSVPWNAIISGHGIHGQGEKSLSLFGEMEEEGVKPDHVTFVSLLSACSHAGLIDQGQQ 362
               V WN+II+ +  +     +   F +M+  G +PD +T VSL      A ++ Q + 
Sbjct: 379 ITDVVSWNSIIAAYEQNDDPVTAHGFFVKMQLNGFQPDLLTLVSL------ASIVAQSRD 432

Query: 363 C 365
           C
Sbjct: 433 C 433



 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 42/131 (32%), Positives = 64/131 (48%)
 Frame = +3

Query: 18  PAYSHVGALRQGMKVHGHTVKIGLLSDIYVGTCLIDVYAKCGRLNDAMLLFKQVPRKSSV 197
           P     G L  G K+H    K+G   +++V   LI +Y++ G    A  LF  +P +   
Sbjct: 223 PVLKACGTLVDGRKIHCWAFKLGFQWNVFVAASLIHMYSRFGFTGIARSLFDDMPFRDMG 282

Query: 198 PWNAIISGHGIHGQGEKSLSLFGEMEEEGVKPDHVTFVSLLSACSHAGLIDQGQQCFKLM 377
            WNA+ISG   +G   ++L +  EM  EG+K + VT VS+L  C   G I        ++
Sbjct: 283 SWNAMISGLIQNGNAAQALDVLDEMRLEGIKMNFVTVVSILPVCPQLGDISTA-----ML 337

Query: 378 QEKYCIQPGLK 410
              Y I+ GL+
Sbjct: 338 IHLYVIKHGLE 348


>emb|CBI32403.3| unnamed protein product [Vitis vinifera]
          Length = 658

 Score =  225 bits (574), Expect = 3e-57
 Identities = 107/148 (72%), Positives = 126/148 (85%)
 Frame = +3

Query: 6   VSILPAYSHVGALRQGMKVHGHTVKIGLLSDIYVGTCLIDVYAKCGRLNDAMLLFKQVPR 185
           VSILPAY+HVGAL+QGMK+HG  +K  L  D++V TCLIDVY KCGRL DAM LF QVP+
Sbjct: 291 VSILPAYAHVGALQQGMKIHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQ 350

Query: 186 KSSVPWNAIISGHGIHGQGEKSLSLFGEMEEEGVKPDHVTFVSLLSACSHAGLIDQGQQC 365
           +SSV WNAIIS HGIHG  EK+L LFGEM +EGVKPDHVTFVSLLSACSH+G +++G+ C
Sbjct: 351 ESSVTWNAIISCHGIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGKWC 410

Query: 366 FKLMQEKYCIQPGLKHFGCIVDLLGRAG 449
           F+LMQE Y I+P LKH+GC+VDLLGRAG
Sbjct: 411 FRLMQE-YGIKPSLKHYGCMVDLLGRAG 437



 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 40/127 (31%), Positives = 64/127 (50%), Gaps = 4/127 (3%)
 Frame = +3

Query: 18  PAYSHVGALRQGMKVHGHTVKIGLLSDIYVGTCLIDVYAKCGRLNDAMLLFKQVPRKSSV 197
           P     G L  G K+H    K+G   +++V   LI +Y++ G    A  LF  +P +   
Sbjct: 123 PVLKACGTLVDGRKIHCWAFKLGFQWNVFVAASLIHMYSRFGFTGIARSLFDDMPFRDMG 182

Query: 198 PWNAIISGHGIHGQGEKSLSLFGEMEEEGVKPDHVTFVSLL----SACSHAGLIDQGQQC 365
            WNA+ISG   +G   ++L +  EM  EG+K + VT VS+L       +  GL+D   + 
Sbjct: 183 SWNAMISGLIQNGNAAQALDVLDEMRLEGIKMNFVTVVSILPVFVDMYAKLGLLDSAHKV 242

Query: 366 FKLMQEK 386
           F+++  K
Sbjct: 243 FEIIPVK 249



 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 36/133 (27%), Positives = 75/133 (56%), Gaps = 1/133 (0%)
 Frame = +3

Query: 54  MKVHGHTVKIGLLSDIYVGTCLIDVYAKCGRLNDAMLLFKQVPRKSSVPWNAIISGHGIH 233
           M++ G  +K+  ++ + +    +D+YAK G L+ A  +F+ +P K  + WN +I+G+  +
Sbjct: 207 MRLEG--IKMNFVTVVSILPVFVDMYAKLGLLDSAHKVFEIIPVKDVISWNTLITGYAQN 264

Query: 234 GQGEKSLSLFGEMEE-EGVKPDHVTFVSLLSACSHAGLIDQGQQCFKLMQEKYCIQPGLK 410
           G   +++ ++  MEE + + P+  T+VS+L A +H G + QG +    +  K  +   + 
Sbjct: 265 GLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHVGALQQGMKIHGRV-IKTNLHLDVF 323

Query: 411 HFGCIVDLLGRAG 449
              C++D+ G+ G
Sbjct: 324 VATCLIDVYGKCG 336


>emb|CAN64990.1| hypothetical protein VITISV_001772 [Vitis vinifera]
          Length = 891

 Score =  224 bits (571), Expect = 6e-57
 Identities = 106/148 (71%), Positives = 126/148 (85%)
 Frame = +3

Query: 6   VSILPAYSHVGALRQGMKVHGHTVKIGLLSDIYVGTCLIDVYAKCGRLNDAMLLFKQVPR 185
           VSILPAY+HVGAL+QGM++HG  +K  L  D++V TCLIDVY KCGRL DAM LF QVP+
Sbjct: 524 VSILPAYAHVGALQQGMRIHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQ 583

Query: 186 KSSVPWNAIISGHGIHGQGEKSLSLFGEMEEEGVKPDHVTFVSLLSACSHAGLIDQGQQC 365
           +SSV WNAIIS HGIHG  EK+L LFGEM +EGVKPDHVTFVSLLSACSH+G +++G+ C
Sbjct: 584 ESSVTWNAIISCHGIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGKWC 643

Query: 366 FKLMQEKYCIQPGLKHFGCIVDLLGRAG 449
           F+LMQE Y I+P LKH+GC+VDLLGRAG
Sbjct: 644 FRLMQE-YGIKPSLKHYGCMVDLLGRAG 670



 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 42/151 (27%), Positives = 82/151 (54%), Gaps = 2/151 (1%)
 Frame = +3

Query: 3   LVSILPAYSHVGALRQGMKVHGHTVKIG-LLSDIYVGTCLIDVYAKCGRLNDAMLLFKQV 179
           LVS+    +     +    VHG  ++ G L+ D+ +G  ++D+YAK G L+ A  +F+ +
Sbjct: 420 LVSLASIVAQSRDCKNSRSVHGFIMRRGWLMEDVVIGNAVVDMYAKLGLLDSAHKVFEII 479

Query: 180 PRKSSVPWNAIISGHGIHGQGEKSLSLFGEMEE-EGVKPDHVTFVSLLSACSHAGLIDQG 356
             K  + WN +I+G+  +G   +++ ++  MEE + + P+  T+VS+L A +H G + QG
Sbjct: 480 LVKDVISWNTLITGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHVGALQQG 539

Query: 357 QQCFKLMQEKYCIQPGLKHFGCIVDLLGRAG 449
            +    +  K  +   +    C++D+ G+ G
Sbjct: 540 MRIHGRV-IKTNLHLDVFVATCLIDVYGKCG 569



 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 41/121 (33%), Positives = 65/121 (53%)
 Frame = +3

Query: 3   LVSILPAYSHVGALRQGMKVHGHTVKIGLLSDIYVGTCLIDVYAKCGRLNDAMLLFKQVP 182
           +VSILP    +G +   M +H + +K GL  D++V   LI++YAK G L DA   F+Q+ 
Sbjct: 319 VVSILPVCPQLGDISTAMLIHLYVIKHGLEFDLFVSNALINMYAKFGNLEDARKAFQQMF 378

Query: 183 RKSSVPWNAIISGHGIHGQGEKSLSLFGEMEEEGVKPDHVTFVSLLSACSHAGLIDQGQQ 362
               V WN+II+ +  +     +   F +M+  G +PD +T VSL      A ++ Q + 
Sbjct: 379 ITDVVSWNSIIAAYEQNDDPVTAHGFFVKMQLNGFQPDLLTLVSL------ASIVAQSRD 432

Query: 363 C 365
           C
Sbjct: 433 C 433



 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 41/131 (31%), Positives = 64/131 (48%)
 Frame = +3

Query: 18  PAYSHVGALRQGMKVHGHTVKIGLLSDIYVGTCLIDVYAKCGRLNDAMLLFKQVPRKSSV 197
           P     G L  G ++H    K+G   +++V   LI +Y++ G    A  LF  +P +   
Sbjct: 223 PVLKACGTLVDGRRIHCWAFKLGFQWNVFVAASLIHMYSRFGFTGIARSLFDDMPFRDMG 282

Query: 198 PWNAIISGHGIHGQGEKSLSLFGEMEEEGVKPDHVTFVSLLSACSHAGLIDQGQQCFKLM 377
            WNA+ISG   +G   ++L +  EM  EG+K + VT VS+L  C   G I        ++
Sbjct: 283 SWNAMISGLIQNGNAAQALDVLDEMRLEGIKMNFVTVVSILPVCPQLGDISTA-----ML 337

Query: 378 QEKYCIQPGLK 410
              Y I+ GL+
Sbjct: 338 IHLYVIKHGLE 348


>ref|XP_002300569.1| predicted protein [Populus trichocarpa] gi|222847827|gb|EEE85374.1|
           predicted protein [Populus trichocarpa]
          Length = 568

 Score =  224 bits (570), Expect = 7e-57
 Identities = 101/148 (68%), Positives = 126/148 (85%)
 Frame = +3

Query: 6   VSILPAYSHVGALRQGMKVHGHTVKIGLLSDIYVGTCLIDVYAKCGRLNDAMLLFKQVPR 185
           VSILPAYSHVGAL+QGM++HG  +K  L SD++VGTCLID+Y KCG+L+DA+ LF QVPR
Sbjct: 200 VSILPAYSHVGALQQGMRIHGQVIKNCLYSDVFVGTCLIDMYGKCGKLDDAISLFYQVPR 259

Query: 186 KSSVPWNAIISGHGIHGQGEKSLSLFGEMEEEGVKPDHVTFVSLLSACSHAGLIDQGQQC 365
           K+SVPWNA+IS +G+HG GEK+L LF EM+ E VKPDH+TFVSLLSACSH+GL+   Q C
Sbjct: 260 KNSVPWNAMISCYGVHGDGEKALELFREMKAERVKPDHITFVSLLSACSHSGLVSDAQWC 319

Query: 366 FKLMQEKYCIQPGLKHFGCIVDLLGRAG 449
           F +M+E+Y I+P LKH+GC+VDL GRAG
Sbjct: 320 FNMMEEEYGIKPSLKHYGCMVDLFGRAG 347



 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 48/150 (32%), Positives = 84/150 (56%), Gaps = 1/150 (0%)
 Frame = +3

Query: 3   LVSILPAYSHVGALRQGMKVHGHTVKIGLLSDIYVGTCLIDVYAKCGRLNDAMLLFKQVP 182
           + S+LP  + VG +  G  +H + +K GL  +++V   LI++YAK G L  A  +F  + 
Sbjct: 98  VASVLPVCAQVGDILSGKLIHLYVIKHGLEFELFVSNALINMYAKFGSLGHAQKVFGLL- 156

Query: 183 RKSSVPWNAIISGHGIHGQGEKSLSLFGEMEE-EGVKPDHVTFVSLLSACSHAGLIDQGQ 359
            K  V WN +I+G+  +G   +++ ++  MEE E + P+  T+VS+L A SH G + QG 
Sbjct: 157 IKDVVSWNTLITGYAQNGLASEAIEVYLLMEEHEEIIPNQGTWVSILPAYSHVGALQQGM 216

Query: 360 QCFKLMQEKYCIQPGLKHFGCIVDLLGRAG 449
           +    +  K C+   +    C++D+ G+ G
Sbjct: 217 RIHGQV-IKNCLYSDVFVGTCLIDMYGKCG 245



 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 44/131 (33%), Positives = 69/131 (52%)
 Frame = +3

Query: 18  PAYSHVGALRQGMKVHGHTVKIGLLSDIYVGTCLIDVYAKCGRLNDAMLLFKQVPRKSSV 197
           P     G L  G K+H   +K+G   D++V   L+ +Y++ G + DA  LF  +P +   
Sbjct: 2   PVVKACGDLLDGKKIHCLVLKLGFEWDVFVAASLVHMYSRFGLVGDARKLFDDMPARDRG 61

Query: 198 PWNAIISGHGIHGQGEKSLSLFGEMEEEGVKPDHVTFVSLLSACSHAGLIDQGQQCFKLM 377
            WNA+ISG+  +G   ++L +  EM  EGVK D +T  S+L  C+  G I  G+     +
Sbjct: 62  SWNAMISGYCQNGNAAEALDIADEMRLEGVKMDAITVASVLPVCAQVGDILSGK-----L 116

Query: 378 QEKYCIQPGLK 410
              Y I+ GL+
Sbjct: 117 IHLYVIKHGLE 127