BLASTX nr result

ID: Coptis21_contig00027702 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00027702
         (231 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269840.2| PREDICTED: AP2-like ethylene-responsive tran...    73   2e-11
emb|CAN63760.1| hypothetical protein VITISV_008633 [Vitis vinifera]    73   2e-11
ref|XP_002514802.1| Protein AINTEGUMENTA, putative [Ricinus comm...    59   3e-07
ref|XP_002311259.1| AP2 domain-containing transcription factor [...    59   4e-07

>ref|XP_002269840.2| PREDICTED: AP2-like ethylene-responsive transcription factor
           BBM-like [Vitis vinifera]
          Length = 730

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 39/74 (52%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
 Frame = +3

Query: 3   DHEQKLKGCNTMTTS-YDNSGDYMFSNCSLQLPXXXXXXXXXXXXXXXXXXXXXXXXIGL 179
           DHEQKL+GCN++  + YD+S DYMF NCSLQLP                        IGL
Sbjct: 133 DHEQKLQGCNSIAAAAYDSSADYMFPNCSLQLPSEPVDTPTPRGGGGGSTTVNNSS-IGL 191

Query: 180 SMIKTWLRNQPTPT 221
           SMIKTWLRNQP PT
Sbjct: 192 SMIKTWLRNQPAPT 205


>emb|CAN63760.1| hypothetical protein VITISV_008633 [Vitis vinifera]
          Length = 731

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 39/74 (52%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
 Frame = +3

Query: 3   DHEQKLKGCNTMTTS-YDNSGDYMFSNCSLQLPXXXXXXXXXXXXXXXXXXXXXXXXIGL 179
           DHEQKL+GCN++  + YD+S DYMF NCSLQLP                        IGL
Sbjct: 133 DHEQKLQGCNSIAAAAYDSSADYMFPNCSLQLPSEPVDTPTPRGGGGGSTTVNNSS-IGL 191

Query: 180 SMIKTWLRNQPTPT 221
           SMIKTWLRNQP PT
Sbjct: 192 SMIKTWLRNQPAPT 205


>ref|XP_002514802.1| Protein AINTEGUMENTA, putative [Ricinus communis]
           gi|223545853|gb|EEF47356.1| Protein AINTEGUMENTA,
           putative [Ricinus communis]
          Length = 729

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 34/73 (46%), Positives = 37/73 (50%)
 Frame = +3

Query: 3   DHEQKLKGCNTMTTSYDNSGDYMFSNCSLQLPXXXXXXXXXXXXXXXXXXXXXXXXIGLS 182
           +HE KL  CNTM  +   +GDYMF NCSLQ                          IGLS
Sbjct: 135 NHEHKLPACNTMYNT--GTGDYMFQNCSLQ-QATPNDRTSNGEGTDSINASSSNSSIGLS 191

Query: 183 MIKTWLRNQPTPT 221
           MIKTWLRNQP PT
Sbjct: 192 MIKTWLRNQPAPT 204


>ref|XP_002311259.1| AP2 domain-containing transcription factor [Populus trichocarpa]
           gi|222851079|gb|EEE88626.1| AP2 domain-containing
           transcription factor [Populus trichocarpa]
          Length = 718

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 34/76 (44%), Positives = 39/76 (51%), Gaps = 3/76 (3%)
 Frame = +3

Query: 3   DHEQKLKGCNTMTTSYDNSGDYMFSNCSLQLPXXXXXXXXXXXXXXXXXXXXXXXX---I 173
           +HE KL  C+TM   Y ++G YMF NCSLQLP                           I
Sbjct: 135 NHEHKLNVCSTM---YGSTGHYMFHNCSLQLPSEDASNERTSSNGGADTSINNNNTNSSI 191

Query: 174 GLSMIKTWLRNQPTPT 221
           GLSMIKTWL+NQP PT
Sbjct: 192 GLSMIKTWLKNQPAPT 207


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