BLASTX nr result

ID: Coptis21_contig00027687 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00027687
         (315 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI28245.3| unnamed protein product [Vitis vinifera]              135   3e-30
ref|XP_002531956.1| conserved hypothetical protein [Ricinus comm...   133   1e-29
ref|XP_003609404.1| Telomere-associated protein RIF1 [Medicago t...   129   2e-28
ref|XP_003550815.1| PREDICTED: uncharacterized protein LOC100782...   126   2e-27
ref|XP_002325200.1| predicted protein [Populus trichocarpa] gi|2...   125   3e-27

>emb|CBI28245.3| unnamed protein product [Vitis vinifera]
          Length = 860

 Score =  135 bits (340), Expect = 3e-30
 Identities = 71/101 (70%), Positives = 81/101 (80%)
 Frame = +2

Query: 8   IYPPPLALSKAVVSDMKKTLLSEMKEVLQDHERKVHTIQAWGWYIRLLGSYALKNRQLVN 187
           I PP L LSKA+V DM + LL  MKE+L +   KV T+QAWGW+IRLLGS+A+K R LVN
Sbjct: 212 ILPPSLTLSKALVIDMTQKLLPGMKEML-NLGMKVQTMQAWGWFIRLLGSHAMKKRHLVN 270

Query: 188 EMLKIPEQTFSDSDPQVQIASQVAWEGLIDALIQPSLEAPE 310
           EMLKIPE TFSD DPQVQI+SQVAWEGLIDALI P L+A E
Sbjct: 271 EMLKIPELTFSDHDPQVQISSQVAWEGLIDALIHPPLQACE 311


>ref|XP_002531956.1| conserved hypothetical protein [Ricinus communis]
           gi|223528402|gb|EEF30438.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 1038

 Score =  133 bits (335), Expect = 1e-29
 Identities = 68/101 (67%), Positives = 80/101 (79%)
 Frame = +2

Query: 8   IYPPPLALSKAVVSDMKKTLLSEMKEVLQDHERKVHTIQAWGWYIRLLGSYALKNRQLVN 187
           I+PPP ALSKA+V DMK  LL+EMK++L +   KV T+QAW W+I LLGS+ALKNR L+N
Sbjct: 116 IFPPPAALSKALVKDMKWKLLTEMKDLL-NQGMKVQTLQAWRWFISLLGSHALKNRHLIN 174

Query: 188 EMLKIPEQTFSDSDPQVQIASQVAWEGLIDALIQPSLEAPE 310
           +MLKIPEQTFSD   QVQIASQVAWEGLIDALI   +   E
Sbjct: 175 DMLKIPEQTFSDHSSQVQIASQVAWEGLIDALIHTPMVTSE 215


>ref|XP_003609404.1| Telomere-associated protein RIF1 [Medicago truncatula]
           gi|355510459|gb|AES91601.1| Telomere-associated protein
           RIF1 [Medicago truncatula]
          Length = 1121

 Score =  129 bits (325), Expect = 2e-28
 Identities = 62/94 (65%), Positives = 78/94 (82%)
 Frame = +2

Query: 5   VIYPPPLALSKAVVSDMKKTLLSEMKEVLQDHERKVHTIQAWGWYIRLLGSYALKNRQLV 184
           ++ PP L LSK +V DMK  LL+ MK++L D   K+  +QAWGW+IR+LGS+ALKN+ LV
Sbjct: 209 IVIPPSLELSKVLVKDMKIKLLNGMKDLL-DSGTKIQAVQAWGWFIRMLGSHALKNKHLV 267

Query: 185 NEMLKIPEQTFSDSDPQVQIASQVAWEGLIDALI 286
           N+MLKIPE+TF+D DPQVQIA+QVAWEGLIDALI
Sbjct: 268 NDMLKIPERTFTDPDPQVQIATQVAWEGLIDALI 301


>ref|XP_003550815.1| PREDICTED: uncharacterized protein LOC100782723 [Glycine max]
          Length = 1894

 Score =  126 bits (316), Expect = 2e-27
 Identities = 59/93 (63%), Positives = 76/93 (81%)
 Frame = +2

Query: 8   IYPPPLALSKAVVSDMKKTLLSEMKEVLQDHERKVHTIQAWGWYIRLLGSYALKNRQLVN 187
           + PP L LSK +V DMK  LL+ MK++L D+  K+  I AWGW++R+LGSYA +NR LVN
Sbjct: 210 VIPPSLDLSKVIVKDMKIKLLNGMKDLL-DNGMKIQAIHAWGWFVRMLGSYASRNRHLVN 268

Query: 188 EMLKIPEQTFSDSDPQVQIASQVAWEGLIDALI 286
           +MLKIPE+TF+D DPQ+QIA+QVAWEGLIDAL+
Sbjct: 269 DMLKIPERTFTDLDPQIQIATQVAWEGLIDALV 301


>ref|XP_002325200.1| predicted protein [Populus trichocarpa] gi|222866634|gb|EEF03765.1|
           predicted protein [Populus trichocarpa]
          Length = 1116

 Score =  125 bits (315), Expect = 3e-27
 Identities = 62/101 (61%), Positives = 78/101 (77%)
 Frame = +2

Query: 8   IYPPPLALSKAVVSDMKKTLLSEMKEVLQDHERKVHTIQAWGWYIRLLGSYALKNRQLVN 187
           I PPP ALSKA+  DMK  LL+ MK++L +   K+ T+QAWGW+IRL GS+A+K R L N
Sbjct: 208 IIPPPPALSKALAEDMKLKLLTVMKDLL-NQGLKIQTLQAWGWFIRLQGSHAMKYRHLTN 266

Query: 188 EMLKIPEQTFSDSDPQVQIASQVAWEGLIDALIQPSLEAPE 310
           +MLK+PE+TFSD +PQVQIAS VAWEGL+DA I P+L   E
Sbjct: 267 DMLKVPEKTFSDHNPQVQIASLVAWEGLVDAFIHPALLTSE 307


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