BLASTX nr result

ID: Coptis21_contig00027685 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00027685
         (470 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002262746.2| PREDICTED: uncharacterized protein LOC100249...    93   2e-17
emb|CAN70653.1| hypothetical protein VITISV_010023 [Vitis vinifera]    93   2e-17
emb|CBI33142.3| unnamed protein product [Vitis vinifera]               90   2e-16
ref|XP_002531664.1| conserved hypothetical protein [Ricinus comm...    73   3e-11
ref|XP_002306295.1| predicted protein [Populus trichocarpa] gi|2...    62   5e-08

>ref|XP_002262746.2| PREDICTED: uncharacterized protein LOC100249503 [Vitis vinifera]
          Length = 1069

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 57/126 (45%), Positives = 78/126 (61%), Gaps = 6/126 (4%)
 Frame = -1

Query: 392 KKQHSTMKEHKDNVNIKEILNLKFEEPQIPNGHKDENEDPEMTEMLKGSIFDVVASPDGP 213
           K Q   +KEH D    +   +   EE +IP   KDE+ED  + E LKGSIFD   SP  P
Sbjct: 545 KAQKPPLKEHHDGKKARNTFSFDLEELKIPVKPKDEDEDFLIEEALKGSIFD-TKSP--P 601

Query: 212 KPVSHHRKMSSS-----GGAINLEDTDRQDGTQSEDSE-DKNSLRKKRALLRRFGELLRK 51
            PV HHRKMSSS     G  I  ED D  +G   +++E +++S RKK+ALLRRFG+L+R+
Sbjct: 602 MPVHHHRKMSSSIFTDDGETICSEDFDNLEGQHFDEAEHERSSHRKKKALLRRFGDLIRR 661

Query: 50  TSYNKR 33
            S++++
Sbjct: 662 RSFHQK 667



 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 57/126 (45%), Positives = 78/126 (61%), Gaps = 6/126 (4%)
 Frame = -1

Query: 392  KKQHSTMKEHKDNVNIKEILNLKFEEPQIPNGHKDENEDPEMTEMLKGSIFDVVASPDGP 213
            K Q   +KEH D    +   +   EE +IP   KDE+ED  + E LKGSIFD   SP  P
Sbjct: 938  KAQKPPLKEHHDGKKARNTFSFDLEELKIPVKPKDEDEDFLIEEALKGSIFD-TKSP--P 994

Query: 212  KPVSHHRKMSSS-----GGAINLEDTDRQDGTQSEDSE-DKNSLRKKRALLRRFGELLRK 51
             PV HHRKMSSS     G  I  ED D  +G   +++E +++S RKK+ALLRRFG+L+R+
Sbjct: 995  MPVHHHRKMSSSIFTDDGETICSEDFDNLEGQHFDEAEHERSSHRKKKALLRRFGDLIRR 1054

Query: 50   TSYNKR 33
             S++++
Sbjct: 1055 RSFHQK 1060


>emb|CAN70653.1| hypothetical protein VITISV_010023 [Vitis vinifera]
          Length = 1301

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 57/126 (45%), Positives = 78/126 (61%), Gaps = 6/126 (4%)
 Frame = -1

Query: 392  KKQHSTMKEHKDNVNIKEILNLKFEEPQIPNGHKDENEDPEMTEMLKGSIFDVVASPDGP 213
            K Q   +KEH D    +   +   EE +IP   KDE+ED  + E LKGSIFD   SP  P
Sbjct: 1170 KAQKPPLKEHHDGKKARNTFSFDLEELKIPVKPKDEDEDFLIEEALKGSIFD-TKSP--P 1226

Query: 212  KPVSHHRKMSSS-----GGAINLEDTDRQDGTQSEDSE-DKNSLRKKRALLRRFGELLRK 51
             PV HHRKMSSS     G  I  ED D  +G   +++E +++S RKK+ALLRRFG+L+R+
Sbjct: 1227 MPVHHHRKMSSSIFTDDGETICSEDFDNLEGQHFDEAEHERSSHRKKKALLRRFGDLIRR 1286

Query: 50   TSYNKR 33
             S++++
Sbjct: 1287 RSFHQK 1292


>emb|CBI33142.3| unnamed protein product [Vitis vinifera]
          Length = 1198

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 55/122 (45%), Positives = 76/122 (62%), Gaps = 6/122 (4%)
 Frame = -1

Query: 380  STMKEHKDNVNIKEILNLKFEEPQIPNGHKDENEDPEMTEMLKGSIFDVVASPDGPKPVS 201
            S  +EH D    +   +   EE +IP   KDE+ED  + E LKGSIFD   SP  P PV 
Sbjct: 1071 SAKEEHHDGKKARNTFSFDLEELKIPVKPKDEDEDFLIEEALKGSIFD-TKSP--PMPVH 1127

Query: 200  HHRKMSSS-----GGAINLEDTDRQDGTQSEDSE-DKNSLRKKRALLRRFGELLRKTSYN 39
            HHRKMSSS     G  I  ED D  +G   +++E +++S RKK+ALLRRFG+L+R+ S++
Sbjct: 1128 HHRKMSSSIFTDDGETICSEDFDNLEGQHFDEAEHERSSHRKKKALLRRFGDLIRRRSFH 1187

Query: 38   KR 33
            ++
Sbjct: 1188 QK 1189


>ref|XP_002531664.1| conserved hypothetical protein [Ricinus communis]
           gi|223528695|gb|EEF30708.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 677

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 51/151 (33%), Positives = 83/151 (54%), Gaps = 23/151 (15%)
 Frame = -1

Query: 410 DQEWIFKKQHSTMKEHKD--------NVNIKEIL--NLKFEEPQIPNGHK-----DENED 276
           +QE   K Q S  KE           ++N+K+++   L +   Q    ++     +E+ED
Sbjct: 469 EQERKLKPQTSADKEQPKERKLSNAFSLNLKDLIIHTLHYTHDQDKRNNEKHNGTEEDED 528

Query: 275 PEMTEMLKGSIFDVVASPDGPKP--VSHHRKMSSS-----GGAINLEDTDRQDGTQSEDS 117
            E  + LKGSIFDV  SP   +   ++HH +  SS     G AIN +D ++ DG   +D 
Sbjct: 529 SENADPLKGSIFDVAESPVAAQTHHINHHHRRKSSIFAEDGEAINPDDLEQLDGVHMDDV 588

Query: 116 EDKNSLRKKRALLRRFGE-LLRKTSYNKRES 27
           E++ + +KK+ALLRRFG+ ++R+   ++RES
Sbjct: 589 ENERNPKKKKALLRRFGDIIIRRRGIHRRES 619


>ref|XP_002306295.1| predicted protein [Populus trichocarpa] gi|222855744|gb|EEE93291.1|
           predicted protein [Populus trichocarpa]
          Length = 609

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 42/136 (30%), Positives = 64/136 (47%), Gaps = 16/136 (11%)
 Frame = -1

Query: 392 KKQHSTMKEHKDNVNIKEILNLKFEEPQIPNGHKD---------------ENEDPEMTEM 258
           K Q++  K+ KD   +    +   +E  IPN H+D               E+ED E  ++
Sbjct: 468 KPQNAEEKQDKDGKKLGRTCSFSLKELIIPNKHRDVDENNKTTDKQNNNDEDEDSENPDL 527

Query: 257 LKGSIFDVVA-SPDGPKPVSHHRKMSSSGGAINLEDTDRQDGTQSEDSEDKNSLRKKRAL 81
           L+GSIFD  A SP    P    +K +  G      D D  DG  + D E + +  +KRA 
Sbjct: 528 LRGSIFDKQAESPTAAVP--RKKKFTDVGKETKPGDYDHIDGAHTNDPESERNSTRKRAY 585

Query: 80  LRRFGELLRKTSYNKR 33
           +RRFG++L +   + R
Sbjct: 586 IRRFGDILLRRGGSHR 601


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