BLASTX nr result

ID: Coptis21_contig00027683 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00027683
         (449 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002325822.1| predicted protein [Populus trichocarpa] gi|2...    89   4e-16
ref|XP_002283098.1| PREDICTED: syntaxin-related protein KNOLLE [...    87   1e-15
ref|XP_002525472.1| syntaxin, putative [Ricinus communis] gi|223...    87   2e-15
emb|CAN79713.1| hypothetical protein VITISV_027502 [Vitis vinifera]    86   4e-15
ref|XP_003611259.1| Knolle [Medicago truncatula] gi|355512594|gb...    85   5e-15

>ref|XP_002325822.1| predicted protein [Populus trichocarpa] gi|222862697|gb|EEF00204.1|
           predicted protein [Populus trichocarpa]
          Length = 313

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 42/65 (64%), Positives = 46/65 (70%)
 Frame = +3

Query: 3   QGEQMDDIEHHVFHAAHYVKDGTKNLKTAKDHQRSSRKWMCXXXXXXXXXXXXXXXPIAT 182
           QGEQMDDIEHHV +A+HYVKDGTK LK+AKDHQ+SSRKWMC               PI T
Sbjct: 249 QGEQMDDIEHHVLNASHYVKDGTKELKSAKDHQKSSRKWMCIGIILLLIIILVIVIPIVT 308

Query: 183 SFSKS 197
           SFS S
Sbjct: 309 SFSYS 313


>ref|XP_002283098.1| PREDICTED: syntaxin-related protein KNOLLE [Vitis vinifera]
          Length = 311

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 44/65 (67%), Positives = 46/65 (70%)
 Frame = +3

Query: 3   QGEQMDDIEHHVFHAAHYVKDGTKNLKTAKDHQRSSRKWMCXXXXXXXXXXXXXXXPIAT 182
           QGEQMDDIEHHV +AA YVKDGTKNLKTAKD+QRSSRK MC               PIAT
Sbjct: 247 QGEQMDDIEHHVMNAAQYVKDGTKNLKTAKDYQRSSRKCMCLGVILLLILILIVVIPIAT 306

Query: 183 SFSKS 197
           SFS S
Sbjct: 307 SFSNS 311


>ref|XP_002525472.1| syntaxin, putative [Ricinus communis] gi|223535285|gb|EEF36962.1|
           syntaxin, putative [Ricinus communis]
          Length = 313

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 41/65 (63%), Positives = 45/65 (69%)
 Frame = +3

Query: 3   QGEQMDDIEHHVFHAAHYVKDGTKNLKTAKDHQRSSRKWMCXXXXXXXXXXXXXXXPIAT 182
           QGEQ+DDIEHHV +A+HYVKDG K LKTAKD+QR SRKWMC               PIAT
Sbjct: 249 QGEQLDDIEHHVLNASHYVKDGAKELKTAKDYQRGSRKWMCIGIILLLIIILVIVIPIAT 308

Query: 183 SFSKS 197
           SFS S
Sbjct: 309 SFSHS 313


>emb|CAN79713.1| hypothetical protein VITISV_027502 [Vitis vinifera]
          Length = 298

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 43/65 (66%), Positives = 45/65 (69%)
 Frame = +3

Query: 3   QGEQMDDIEHHVFHAAHYVKDGTKNLKTAKDHQRSSRKWMCXXXXXXXXXXXXXXXPIAT 182
           QGEQMDDIEHHV +AA YVKDGTKNLKTAKD+QR SRK MC               PIAT
Sbjct: 234 QGEQMDDIEHHVMNAAQYVKDGTKNLKTAKDYQRGSRKCMCLGVILLLILILIVVIPIAT 293

Query: 183 SFSKS 197
           SFS S
Sbjct: 294 SFSNS 298


>ref|XP_003611259.1| Knolle [Medicago truncatula] gi|355512594|gb|AES94217.1| Knolle
           [Medicago truncatula]
          Length = 320

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 40/65 (61%), Positives = 44/65 (67%)
 Frame = +3

Query: 3   QGEQMDDIEHHVFHAAHYVKDGTKNLKTAKDHQRSSRKWMCXXXXXXXXXXXXXXXPIAT 182
           QGE+MDDIEHHV HA+HYVKDGTKNL  AK +Q+SSRKWMC               PI T
Sbjct: 256 QGEKMDDIEHHVLHASHYVKDGTKNLHGAKQYQKSSRKWMCIGIILLLILVLIIVIPIVT 315

Query: 183 SFSKS 197
           SFS S
Sbjct: 316 SFSSS 320


Top