BLASTX nr result

ID: Coptis21_contig00027675 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00027675
         (305 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCA66050.1| hypothetical protein [Beta vulgaris subsp. vulga...    58   6e-08
emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulga...    53   4e-07
emb|CCA66054.1| hypothetical protein [Beta vulgaris subsp. vulga...    56   7e-07
emb|CCA66044.1| hypothetical protein [Beta vulgaris subsp. vulga...    51   8e-06
gb|EEE61581.1| hypothetical protein OsJ_15963 [Oryza sativa Japo...    55   8e-06

>emb|CCA66050.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1357

 Score = 58.2 bits (139), Expect(2) = 6e-08
 Identities = 36/87 (41%), Positives = 48/87 (55%), Gaps = 2/87 (2%)
 Frame = -2

Query: 298 KKFIHRIRDPAGVILTERKQIGDRLLEIFEEIMTTSEPCLN--YEVLSIETPTISPEDHR 125
           +  IH I D  G   TE ++I   +   F+EI T+SEP  N   EVL     +++ E + 
Sbjct: 370 RNLIHGIFDGGGRWQTEGEEIECVVERYFQEIFTSSEPSSNDFQEVLQHVKRSVTQEYND 429

Query: 124 NLVKPVDDEDILIALRQMHPFKAPGPD 44
            L+KP   E+I  AL  MHP KAPGPD
Sbjct: 430 ILLKPYSKEEIFAALSDMHPCKAPGPD 456



 Score = 23.5 bits (49), Expect(2) = 6e-08
 Identities = 9/12 (75%), Positives = 9/12 (75%)
 Frame = -3

Query: 42  PDGNQAIFYQHF 7
           PDG  AIFYQ F
Sbjct: 455 PDGMHAIFYQRF 466


>emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1369

 Score = 52.8 bits (125), Expect(2) = 4e-07
 Identities = 29/87 (33%), Positives = 42/87 (48%)
 Frame = -2

Query: 304 EDKKFIHRIRDPAGVILTERKQIGDRLLEIFEEIMTTSEPCLNYEVLSIETPTISPEDHR 125
           E +  + RIR+ AG    +   + +     FE +  +   C    +L+I  P I+ E   
Sbjct: 372 EQRNNVRRIRNEAGEWFEDEDDVTECFAHYFENLFQSGNNCEMDPILNIVKPQITDELGT 431

Query: 124 NLVKPVDDEDILIALRQMHPFKAPGPD 44
            L  P   E++  AL QMHP KAPGPD
Sbjct: 432 QLDAPFRREEVSAALAQMHPNKAPGPD 458



 Score = 25.8 bits (55), Expect(2) = 4e-07
 Identities = 9/12 (75%), Positives = 10/12 (83%)
 Frame = -3

Query: 42  PDGNQAIFYQHF 7
           PDG  A+FYQHF
Sbjct: 457 PDGMNALFYQHF 468


>emb|CCA66054.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1355

 Score = 55.8 bits (133), Expect(2) = 7e-07
 Identities = 32/87 (36%), Positives = 48/87 (55%), Gaps = 2/87 (2%)
 Frame = -2

Query: 298 KKFIHRIRDPAGVILTERKQIGDRLLEIFEEIMTTSEPC-LNYE-VLSIETPTISPEDHR 125
           + F+  + D  G    E   I +     F  I T+S P  L+ E V+S+  P ++ E + 
Sbjct: 367 RNFVKGLFDGLGTWREEADHIENIFTSYFSSIFTSSNPSDLSLEAVMSVIEPVVTEEHNL 426

Query: 124 NLVKPVDDEDILIALRQMHPFKAPGPD 44
            L++P   ++IL AL+QMHP KAPGPD
Sbjct: 427 KLLEPFSKDEILAALQQMHPCKAPGPD 453



 Score = 21.9 bits (45), Expect(2) = 7e-07
 Identities = 8/12 (66%), Positives = 8/12 (66%)
 Frame = -3

Query: 42  PDGNQAIFYQHF 7
           PDG   IFYQ F
Sbjct: 452 PDGMHVIFYQRF 463


>emb|CCA66044.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1355

 Score = 51.2 bits (121), Expect(2) = 8e-06
 Identities = 31/88 (35%), Positives = 46/88 (52%), Gaps = 3/88 (3%)
 Frame = -2

Query: 298 KKFIHRIRDPAGVILTERKQIGDRLLEIFEEIMTTSEPC---LNYEVLSIETPTISPEDH 128
           + F+  + D +G    E   I     + F  I T++ P    LN +VL    P ++ E +
Sbjct: 367 RNFVKGLFDASGTWCEEVDDIECVFTDYFTSIFTSTNPSDVQLN-DVLCCVDPVVTEECN 425

Query: 127 RNLVKPVDDEDILIALRQMHPFKAPGPD 44
             L+KP   E++ +AL QMHP KAPGPD
Sbjct: 426 TWLLKPFSKEELYVALSQMHPCKAPGPD 453



 Score = 23.1 bits (48), Expect(2) = 8e-06
 Identities = 9/12 (75%), Positives = 9/12 (75%)
 Frame = -3

Query: 42  PDGNQAIFYQHF 7
           PDG  AIFYQ F
Sbjct: 452 PDGMHAIFYQKF 463


>gb|EEE61581.1| hypothetical protein OsJ_15963 [Oryza sativa Japonica Group]
          Length = 1494

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 29/85 (34%), Positives = 48/85 (56%)
 Frame = -2

Query: 298 KKFIHRIRDPAGVILTERKQIGDRLLEIFEEIMTTSEPCLNYEVLSIETPTISPEDHRNL 119
           K  I ++R   G++ ++ +++G+     F ++ T  E     E+L++  P I+ E +  L
Sbjct: 617 KNLIKKLRRSDGMMCSKEEELGEIARSFFRDLYTKDESLNPGELLNMFEPKITDEMNGML 676

Query: 118 VKPVDDEDILIALRQMHPFKAPGPD 44
            KP  DE+I  AL Q+ P KAPGPD
Sbjct: 677 TKPFTDEEISDALFQIGPLKAPGPD 701


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