BLASTX nr result

ID: Coptis21_contig00027673 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00027673
         (1048 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281775.1| PREDICTED: uncharacterized protein LOC100242...   103   9e-20
emb|CAN78966.1| hypothetical protein VITISV_019939 [Vitis vinifera]   103   9e-20
ref|XP_002315573.1| predicted protein [Populus trichocarpa] gi|2...   101   3e-19
ref|XP_002528818.1| conserved hypothetical protein [Ricinus comm...    95   2e-17
ref|XP_002271998.1| PREDICTED: uncharacterized protein LOC100242...    93   1e-16

>ref|XP_002281775.1| PREDICTED: uncharacterized protein LOC100242675 [Vitis vinifera]
          Length = 153

 Score =  103 bits (256), Expect = 9e-20
 Identities = 65/157 (41%), Positives = 84/157 (53%), Gaps = 7/157 (4%)
 Frame = -3

Query: 647 IFPLGMSRKRKEREIMGPKMDSKAGLKTGFDGFXXXXXXXXXXXXXXXXXXSAKQLEELK 468
           I   G SRKRKE E                 GF                  +A  L+  +
Sbjct: 8   ILTSGASRKRKEVE-----------------GFYANKPCSPPAPAPAPASPTAATLKAAE 50

Query: 467 SGVNNKLLAGYMATEFLGNGTFLGGKYDPARAEAAPV---SAKGRGVE----KKGAEANK 309
              +N+LLAGYMA EFL  GT  G K DPARAEA P+   +A+G+ ++    ++ AE + 
Sbjct: 51  PASSNRLLAGYMAYEFLTKGTLFGQKLDPARAEAVPLPSSAAEGKRMKLSQIEEAAEPSA 110

Query: 308 PSLKKHQSYAEVANLLKSDGTHIPGIFNPTHLARWLQ 198
              K+HQSY E+A+LLK+DG HIPGI NPT LARW+Q
Sbjct: 111 RPAKQHQSYGELASLLKTDGAHIPGIVNPTQLARWIQ 147


>emb|CAN78966.1| hypothetical protein VITISV_019939 [Vitis vinifera]
          Length = 153

 Score =  103 bits (256), Expect = 9e-20
 Identities = 65/157 (41%), Positives = 84/157 (53%), Gaps = 7/157 (4%)
 Frame = -3

Query: 647 IFPLGMSRKRKEREIMGPKMDSKAGLKTGFDGFXXXXXXXXXXXXXXXXXXSAKQLEELK 468
           I   G SRKRKE E                 GF                  +A  L+  +
Sbjct: 8   ILTSGASRKRKEVE-----------------GFYANKPCSPPAPAPAPASPTAATLKAAE 50

Query: 467 SGVNNKLLAGYMATEFLGNGTFLGGKYDPARAEAAPV---SAKGRGVE----KKGAEANK 309
              +N+LLAGYMA EFL  GT  G K DPARAEA P+   +A+G+ ++    ++ AE + 
Sbjct: 51  PASSNRLLAGYMAYEFLTKGTLFGQKLDPARAEAVPLPSSAAEGKRMKLSQIEEAAEPSA 110

Query: 308 PSLKKHQSYAEVANLLKSDGTHIPGIFNPTHLARWLQ 198
              K+HQSY E+A+LLK+DG HIPGI NPT LARW+Q
Sbjct: 111 RPAKQHQSYGELASLLKTDGAHIPGIVNPTQLARWIQ 147


>ref|XP_002315573.1| predicted protein [Populus trichocarpa] gi|222864613|gb|EEF01744.1|
           predicted protein [Populus trichocarpa]
          Length = 130

 Score =  101 bits (251), Expect = 3e-19
 Identities = 62/146 (42%), Positives = 78/146 (53%)
 Frame = -3

Query: 635 GMSRKRKEREIMGPKMDSKAGLKTGFDGFXXXXXXXXXXXXXXXXXXSAKQLEELKSGVN 456
           G S+KRKERE +   M  K+                            A  L+E  S  +
Sbjct: 12  GASKKRKEREALSYSMKPKSA-----------------------SAQPASNLDEPIS--S 46

Query: 455 NKLLAGYMATEFLGNGTFLGGKYDPARAEAAPVSAKGRGVEKKGAEANKPSLKKHQSYAE 276
           N+LLAGYMA EFL  GT LG K+DPARAE   ++       K+G    K   K+H+SYAE
Sbjct: 47  NRLLAGYMAYEFLTEGTLLGQKFDPARAEVTSLAGGSVECSKRGEPGKK---KEHKSYAE 103

Query: 275 VANLLKSDGTHIPGIFNPTHLARWLQ 198
           VA++LK +G HIPGI NP  LARW+Q
Sbjct: 104 VASILKGEGAHIPGIVNPCQLARWIQ 129


>ref|XP_002528818.1| conserved hypothetical protein [Ricinus communis]
           gi|223531730|gb|EEF33552.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 142

 Score = 95.1 bits (235), Expect = 2e-17
 Identities = 49/90 (54%), Positives = 64/90 (71%), Gaps = 3/90 (3%)
 Frame = -3

Query: 458 NNKLLAGYMATEFLGNGTFLGGKYDPARAEAAPVSAKGRGVEKKGAEANKPSL---KKHQ 288
           +NKLLAGYMA E+L  GT  G K+DP RAEA  + A G    K+G++A +      K+H+
Sbjct: 53  SNKLLAGYMAYEYLTKGTLFGQKFDPGRAEAVAL-AGGLVESKRGSKAIEMETRWKKEHK 111

Query: 287 SYAEVANLLKSDGTHIPGIFNPTHLARWLQ 198
           SYAEVA +LK++G H+PGI NPT LARW+Q
Sbjct: 112 SYAEVAGILKTEGAHLPGIVNPTQLARWIQ 141


>ref|XP_002271998.1| PREDICTED: uncharacterized protein LOC100242917 [Vitis vinifera]
          Length = 142

 Score = 92.8 bits (229), Expect = 1e-16
 Identities = 48/86 (55%), Positives = 60/86 (69%), Gaps = 1/86 (1%)
 Frame = -3

Query: 455 NKLLAGYMATEFLGNGTFLGGKYDPARAEAAPVSAKGRGVEK-KGAEANKPSLKKHQSYA 279
           N+LLAGY+A EFL  GT LG K+DP RA+AAPV  + +  EK KG    +PS + +  Y 
Sbjct: 55  NQLLAGYLAHEFLTKGTLLGEKWDPDRADAAPVPVEFKRKEKGKGKGRAEPSAEAYNRYV 114

Query: 278 EVANLLKSDGTHIPGIFNPTHLARWL 201
           EVA+LLK DG H+PGI NPT L R+L
Sbjct: 115 EVADLLKRDGAHLPGIVNPTQLGRFL 140


Top