BLASTX nr result

ID: Coptis21_contig00027672 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00027672
         (443 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI16330.3| unnamed protein product [Vitis vinifera]              159   3e-37
ref|XP_002282455.1| PREDICTED: putative cyclic nucleotide-gated ...   159   3e-37
ref|XP_004145808.1| PREDICTED: putative cyclic nucleotide-gated ...   153   2e-35
ref|XP_002314283.1| predicted protein [Populus trichocarpa] gi|2...   147   7e-34
ref|XP_003541990.1| PREDICTED: putative cyclic nucleotide-gated ...   143   2e-32

>emb|CBI16330.3| unnamed protein product [Vitis vinifera]
          Length = 697

 Score =  159 bits (401), Expect = 3e-37
 Identities = 86/152 (56%), Positives = 104/152 (68%), Gaps = 6/152 (3%)
 Frame = -1

Query: 440 RSVRFPDSSLELNLQSSHRSKGDKPSNLKNKI------EATSKKTETEVMRKMKTSLSTK 279
           RSV+F D   +L L     + GD    +K KI      EA+ KK   EV  K   SL  K
Sbjct: 7   RSVKFQD---DLELAKFPATNGDGKIKMKYKIDGTQIQEASYKKAGKEVSGKSGRSLKAK 63

Query: 278 VLSRVFSEDYGRVNRKIFDPQGPVINRWNKIFLVSCLISLFIDPLFFYLPEARQEMCIKL 99
           VLSRVFSEDY RV +KI DP+G  I RWNKIFLV+CLISLF+DPLFFYLP+ R ++C+ +
Sbjct: 64  VLSRVFSEDYERVKQKILDPRGKSIRRWNKIFLVACLISLFVDPLFFYLPDVRDKVCMDI 123

Query: 98  GMPVEVVLMSIRSIGDVFYSFQIFMRFRTAYV 3
            +P+EVVL  IRSI D+FY  QIF+RFRTAYV
Sbjct: 124 EIPLEVVLTIIRSIADIFYMIQIFVRFRTAYV 155


>ref|XP_002282455.1| PREDICTED: putative cyclic nucleotide-gated ion channel 15-like
           [Vitis vinifera]
          Length = 713

 Score =  159 bits (401), Expect = 3e-37
 Identities = 86/152 (56%), Positives = 104/152 (68%), Gaps = 6/152 (3%)
 Frame = -1

Query: 440 RSVRFPDSSLELNLQSSHRSKGDKPSNLKNKI------EATSKKTETEVMRKMKTSLSTK 279
           RSV+F D   +L L     + GD    +K KI      EA+ KK   EV  K   SL  K
Sbjct: 7   RSVKFQD---DLELAKFPATNGDGKIKMKYKIDGTQIQEASYKKAGKEVSGKSGRSLKAK 63

Query: 278 VLSRVFSEDYGRVNRKIFDPQGPVINRWNKIFLVSCLISLFIDPLFFYLPEARQEMCIKL 99
           VLSRVFSEDY RV +KI DP+G  I RWNKIFLV+CLISLF+DPLFFYLP+ R ++C+ +
Sbjct: 64  VLSRVFSEDYERVKQKILDPRGKSIRRWNKIFLVACLISLFVDPLFFYLPDVRDKVCMDI 123

Query: 98  GMPVEVVLMSIRSIGDVFYSFQIFMRFRTAYV 3
            +P+EVVL  IRSI D+FY  QIF+RFRTAYV
Sbjct: 124 EIPLEVVLTIIRSIADIFYMIQIFVRFRTAYV 155


>ref|XP_004145808.1| PREDICTED: putative cyclic nucleotide-gated ion channel 15-like
           [Cucumis sativus] gi|449516804|ref|XP_004165436.1|
           PREDICTED: putative cyclic nucleotide-gated ion channel
           15-like [Cucumis sativus]
          Length = 720

 Score =  153 bits (386), Expect = 2e-35
 Identities = 83/150 (55%), Positives = 101/150 (67%), Gaps = 4/150 (2%)
 Frame = -1

Query: 440 RSVRFPDSSLELNLQSSHRSKGDKPSNLKNKIEAT----SKKTETEVMRKMKTSLSTKVL 273
           RSVRF D   +L   +     G   + +   I+ T    S    T   RK   SL  KVL
Sbjct: 27  RSVRFQD---DLESSALPTINGGGVTKIIYNIDGTQIPESSGKRTAASRKSGRSLRAKVL 83

Query: 272 SRVFSEDYGRVNRKIFDPQGPVINRWNKIFLVSCLISLFIDPLFFYLPEARQEMCIKLGM 93
           SRVFSEDY RV RKI DP+G VI RWNKIFLV+CL+SLF+DPLFFYLP  R ++CI +G+
Sbjct: 84  SRVFSEDYERVQRKILDPRGQVIRRWNKIFLVACLVSLFVDPLFFYLPAVRDKVCIDIGV 143

Query: 92  PVEVVLMSIRSIGDVFYSFQIFMRFRTAYV 3
            +EVVL +IRSI DVFY+ QIF++FRTAYV
Sbjct: 144 GLEVVLTTIRSIADVFYTIQIFIKFRTAYV 173


>ref|XP_002314283.1| predicted protein [Populus trichocarpa] gi|222850691|gb|EEE88238.1|
           predicted protein [Populus trichocarpa]
          Length = 745

 Score =  147 bits (372), Expect = 7e-34
 Identities = 83/153 (54%), Positives = 103/153 (67%), Gaps = 7/153 (4%)
 Frame = -1

Query: 440 RSVRFPDSSLELNLQSSHRSKGDKPSNLKNKIEAT-----SKK--TETEVMRKMKTSLST 282
           +SVRF D  LEL+L  +    GD     K  I+ T     S+K  ++ EV  K   S   
Sbjct: 7   KSVRFRDD-LELSLPPA--VNGDGAIKRKYNIDGTQMSDSSRKMMSQMEVSGKTGKSFKA 63

Query: 281 KVLSRVFSEDYGRVNRKIFDPQGPVINRWNKIFLVSCLISLFIDPLFFYLPEARQEMCIK 102
           K+LSRVFSEDY RV +KI DP+G  I RW KIFLV+CL+SLF+DPLFFYLPE  +E+CI 
Sbjct: 64  KILSRVFSEDYDRVKKKILDPRGASIRRWTKIFLVACLVSLFVDPLFFYLPEVWKELCID 123

Query: 101 LGMPVEVVLMSIRSIGDVFYSFQIFMRFRTAYV 3
           +G+P+EV L  +RSI DVFY  QI +RFRTAYV
Sbjct: 124 IGIPLEVGLTIVRSISDVFYMIQILIRFRTAYV 156


>ref|XP_003541990.1| PREDICTED: putative cyclic nucleotide-gated ion channel 15-like
           [Glycine max]
          Length = 803

 Score =  143 bits (360), Expect = 2e-32
 Identities = 69/130 (53%), Positives = 92/130 (70%), Gaps = 3/130 (2%)
 Frame = -1

Query: 383 SKGDKPSNLKNKIEATSKKTETEVMRKMKTS---LSTKVLSRVFSEDYGRVNRKIFDPQG 213
           + GD    +K  I+ T     +  M + K +   L  ++LSRVFSEDY RVNR++ DP+G
Sbjct: 147 TNGDNGVKIKFHIDGTQIPEPSSNMAQKKVTGKFLKARMLSRVFSEDYDRVNRRVLDPRG 206

Query: 212 PVINRWNKIFLVSCLISLFIDPLFFYLPEARQEMCIKLGMPVEVVLMSIRSIGDVFYSFQ 33
             I+RWNKIFLV+CL SLF+DPLFFYLP  R E+CI +G+ +EV+L  +RS+ DVFY FQ
Sbjct: 207 QTIHRWNKIFLVACLASLFVDPLFFYLPVVRDEVCIDIGITIEVILTLVRSVVDVFYVFQ 266

Query: 32  IFMRFRTAYV 3
           I M+FRTA+V
Sbjct: 267 ILMKFRTAFV 276


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