BLASTX nr result

ID: Coptis21_contig00027663 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00027663
         (404 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003530281.1| PREDICTED: UPF0420 protein-like [Glycine max]      82   3e-14
emb|CBI30394.3| unnamed protein product [Vitis vinifera]               81   8e-14
ref|XP_002274737.1| PREDICTED: UPF0420 protein-like [Vitis vinif...    81   8e-14
ref|XP_002528102.1| conserved hypothetical protein [Ricinus comm...    80   1e-13
ref|NP_195771.2| uncharacterized protein [Arabidopsis thaliana] ...    79   4e-13

>ref|XP_003530281.1| PREDICTED: UPF0420 protein-like [Glycine max]
          Length = 480

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 46/99 (46%), Positives = 62/99 (62%), Gaps = 2/99 (2%)
 Frame = -2

Query: 292 QIVQFSLQSNIQGDDGDNNEKDNMLQGEKHVVLVEKYSNGTAKRYILDGDSPIQSFF--E 119
           Q +  S  S+ + +DG +N      Q    V+LVE+YSNGTAKRY+L  DS +Q+F   E
Sbjct: 13  QFLCSSEHSSFKDEDGADNGGG---QVSSRVILVERYSNGTAKRYVLGDDSQLQAFLVEE 69

Query: 118 ESSVNGSQQASNSSKEELFWLPDSVKEFILPANFPGSVS 2
           + S     Q  +SS E L WLP+ +K+F+LPA FPGSVS
Sbjct: 70  DRSTPNRFQDLHSSDESLSWLPEIIKDFVLPAGFPGSVS 108


>emb|CBI30394.3| unnamed protein product [Vitis vinifera]
          Length = 462

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 43/73 (58%), Positives = 52/73 (71%), Gaps = 1/73 (1%)
 Frame = -2

Query: 217 QGEKHVVLVEKYSNGTAKRYILDGDSPIQSFF-EESSVNGSQQASNSSKEELFWLPDSVK 41
           Q  +HV+L+EKY+NGTAKR+ILD D  IQ+F  EE S     Q S+ S  +L WLP  VK
Sbjct: 18  QCPQHVILLEKYNNGTAKRFILDDDIQIQTFLEEEGSKTERVQGSSFSDTQLSWLPIIVK 77

Query: 40  EFILPANFPGSVS 2
           +FILPA FPGSVS
Sbjct: 78  DFILPAGFPGSVS 90


>ref|XP_002274737.1| PREDICTED: UPF0420 protein-like [Vitis vinifera]
          Length = 503

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 57/128 (44%), Positives = 75/128 (58%), Gaps = 7/128 (5%)
 Frame = -2

Query: 364 MAHSNQLSLPLFAFKS-LKSRNL---DNQIVQFSLQSNIQGDDGDNNEKDNML-QGEKHV 200
           M H+ Q S P+  F++ LK R     D  IV  S  S+   +  +  +  N   Q  +HV
Sbjct: 1   MVHALQFSFPVSGFQTPLKIRRRKFGDFGIVCSSTLSDSPEEGQEIGDAGNKRGQCPQHV 60

Query: 199 VLVEKYSNGTAK-RYILDGDSPIQSFFEESSVNGSQ-QASNSSKEELFWLPDSVKEFILP 26
           +L+EKY+NGTAK R+ILD D  IQ+F EE      + Q S+ S  +L WLP  VK+FILP
Sbjct: 61  ILLEKYNNGTAKSRFILDDDIQIQTFLEEEGSKTERVQGSSFSDTQLSWLPIIVKDFILP 120

Query: 25  ANFPGSVS 2
           A FPGSVS
Sbjct: 121 AGFPGSVS 128


>ref|XP_002528102.1| conserved hypothetical protein [Ricinus communis]
           gi|223532491|gb|EEF34281.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 485

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 51/122 (41%), Positives = 69/122 (56%), Gaps = 1/122 (0%)
 Frame = -2

Query: 364 MAHSNQLSLPLFAFKSLKSRNLDNQIVQFSLQSNIQGDDGDNNEKDNMLQGEKHVVLVEK 185
           M+ S +LS P  AF+S   R     +   S      G D  NN ++        V+LVE+
Sbjct: 1   MSFSLRLSSPAPAFESCNRRKRARPLQILSCFQ--AGKDETNNCRN--------VILVER 50

Query: 184 YSNGTAKRYILDGDSPIQSFFEESSV-NGSQQASNSSKEELFWLPDSVKEFILPANFPGS 8
           Y+NGT++RY+LD D+ ++ F EE    N + Q S SS   L WLP  +K+FILPA FPGS
Sbjct: 51  YANGTSRRYVLDDDAQLKPFLEEQGAKNSALQESYSSDINLSWLPYIIKDFILPAGFPGS 110

Query: 7   VS 2
           VS
Sbjct: 111 VS 112


>ref|NP_195771.2| uncharacterized protein [Arabidopsis thaliana]
           gi|209863158|gb|ACI88737.1| At5g01510 [Arabidopsis
           thaliana] gi|332002971|gb|AED90354.1| uncharacterized
           protein [Arabidopsis thaliana]
          Length = 509

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 42/93 (45%), Positives = 62/93 (66%), Gaps = 4/93 (4%)
 Frame = -2

Query: 268 SNIQGDDGDNNEKDNMLQGEKHV-VLVEKYSNGTAKRYILDGD-SPIQSFFEESSV--NG 101
           S+I+ DD D +  D  +  E+ + ++VE+Y NGT+KRY LD D SP+Q   EE     + 
Sbjct: 39  SSIREDDEDAD--DRRVGVERRISIVVERYGNGTSKRYFLDDDDSPLQGILEERETKPDN 96

Query: 100 SQQASNSSKEELFWLPDSVKEFILPANFPGSVS 2
           + Q+SNSS+  + WLPD V++F+ P+ FPGSVS
Sbjct: 97  NSQSSNSSETNILWLPDVVRDFVFPSGFPGSVS 129


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