BLASTX nr result

ID: Coptis21_contig00027659 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00027659
         (462 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275523.2| PREDICTED: uncharacterized protein LOC100264...    82   4e-14
ref|XP_003594872.1| hypothetical protein MTR_2g035660 [Medicago ...    79   3e-13
ref|XP_002528137.1| conserved hypothetical protein [Ricinus comm...    79   3e-13
ref|XP_003533613.1| PREDICTED: ribulose-1,5 bisphosphate carboxy...    79   5e-13
ref|XP_003546388.1| PREDICTED: ribulose-1,5 bisphosphate carboxy...    75   5e-12

>ref|XP_002275523.2| PREDICTED: uncharacterized protein LOC100264713 [Vitis vinifera]
           gi|297738036|emb|CBI27237.3| unnamed protein product
           [Vitis vinifera]
          Length = 482

 Score = 82.0 bits (201), Expect = 4e-14
 Identities = 51/94 (54%), Positives = 62/94 (65%), Gaps = 9/94 (9%)
 Frame = -2

Query: 257 MASLPL-QLPNLSFISNNPKLKCFG--SSTPKHTSF-----HFKPISASVETPPFRLFEP 102
           MAS PL   P   FIS+N    C G  SS P ++       + +PI A+VE PPF LFEP
Sbjct: 1   MASSPLLHHPTHCFISSNQGF-CNGLSSSRPNYSWMRGSGNNIRPIKAAVEMPPFPLFEP 59

Query: 101 SHSE-ESVSELEPADPDFYKIGYIRSVRAYGVDF 3
              E ++ S+LEPADPDFYKIGY+RSVRAYGV+F
Sbjct: 60  PQIESDTPSQLEPADPDFYKIGYVRSVRAYGVEF 93


>ref|XP_003594872.1| hypothetical protein MTR_2g035660 [Medicago truncatula]
           gi|355483920|gb|AES65123.1| hypothetical protein
           MTR_2g035660 [Medicago truncatula]
          Length = 363

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 34/50 (68%), Positives = 42/50 (84%)
 Frame = -2

Query: 152 KPISASVETPPFRLFEPSHSEESVSELEPADPDFYKIGYIRSVRAYGVDF 3
           +P+ ASVET PF LF+P   EE+ S+LEP DPDFYKIG++RS+RAYGVDF
Sbjct: 42  QPVKASVETAPFPLFQPPKDEETASQLEPVDPDFYKIGFVRSMRAYGVDF 91


>ref|XP_002528137.1| conserved hypothetical protein [Ricinus communis]
           gi|223532435|gb|EEF34228.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 483

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 45/84 (53%), Positives = 56/84 (66%), Gaps = 6/84 (7%)
 Frame = -2

Query: 236 LPNLSFISNNPKLKCFGSSTPKHTSFH-----FKPISAS-VETPPFRLFEPSHSEESVSE 75
           L + SFIS     +   ++ PK+T         +PI AS VE PPF LF+   +EES SE
Sbjct: 11  LTHCSFISLQQYKEGLITARPKYTFSRNSDNVVRPIKASSVEAPPFPLFQSPKTEESSSE 70

Query: 74  LEPADPDFYKIGYIRSVRAYGVDF 3
           LEPADPDFYKIGY+RS+RAYGV+F
Sbjct: 71  LEPADPDFYKIGYVRSMRAYGVEF 94


>ref|XP_003533613.1| PREDICTED: ribulose-1,5 bisphosphate carboxylase/oxygenase large
           subunit N-methyltransferase, chloroplastic-like [Glycine
           max]
          Length = 482

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 36/50 (72%), Positives = 41/50 (82%)
 Frame = -2

Query: 152 KPISASVETPPFRLFEPSHSEESVSELEPADPDFYKIGYIRSVRAYGVDF 3
           +PI ASV  PPF LF+P   EE+ SELEPADPDFYKIGY+RS+RAYGV F
Sbjct: 44  RPIKASVGAPPFPLFKPPQVEETSSELEPADPDFYKIGYVRSMRAYGVHF 93


>ref|XP_003546388.1| PREDICTED: ribulose-1,5 bisphosphate carboxylase/oxygenase large
           subunit N-methyltransferase, chloroplastic-like [Glycine
           max]
          Length = 483

 Score = 75.1 bits (183), Expect = 5e-12
 Identities = 36/51 (70%), Positives = 41/51 (80%), Gaps = 1/51 (1%)
 Frame = -2

Query: 152 KPISASVETPPFRLFEPSHSEESVS-ELEPADPDFYKIGYIRSVRAYGVDF 3
           +PI ASV  PPF LF+P   EE+ S ELEPADPDFYKIGY+RS+RAYGV F
Sbjct: 44  RPIRASVGAPPFPLFQPPQVEETTSSELEPADPDFYKIGYVRSMRAYGVQF 94


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