BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00027637
         (1350 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266551.2| PREDICTED: CCA tRNA nucleotidyltransferase, ...   575   e-162
emb|CBI18302.3| unnamed protein product [Vitis vinifera]              573   e-161
ref|XP_002327340.1| predicted protein [Populus trichocarpa] gi|2...   535   e-150
ref|XP_003556190.1| PREDICTED: CCA tRNA nucleotidyltransferase, ...   513   e-143
ref|XP_002533879.1| poly(A) polymerase, putative [Ricinus commun...   510   e-142

>ref|XP_002266551.2| PREDICTED: CCA tRNA nucleotidyltransferase, mitochondrial [Vitis
            vinifera]
          Length = 564

 Score =  575 bits (1482), Expect = e-162
 Identities = 297/436 (68%), Positives = 355/436 (81%), Gaps = 4/436 (0%)
 Frame = +2

Query: 50   LAPFKLPNFHLNSKLGF--YKSYNCREVQTMSVSLTDGQQEVKVKEKIQLNEKEKQIFDR 223
            L PF LP    ++  GF      +CR       ++      V+V++ I L  KE QIF +
Sbjct: 22   LQPFLLP---CSTAFGFPTLSPLHCR-------AMASSPPSVQVRDSIDLTPKETQIFQK 71

Query: 224  LLQVVTHFNLQTQLRVAGGWVRDKLLGKECYDIDIALDNMLGKEFCEKVNEFLLHSGEDK 403
            LLQVV HF+L+TQLRVAGGWVRDKLLGKECYDIDIALD+MLG+EFCEK+N++L  +GE+K
Sbjct: 72   LLQVVRHFSLRTQLRVAGGWVRDKLLGKECYDIDIALDDMLGREFCEKINDYLSCTGEEK 131

Query: 404  CGIGVIQCNPDQSKHLETARMRLYDIWIDFVNLRSENYSENSRIPTMTFGTAKDDAYRRD 583
             GIGVIQCNPDQSKHLETARMRL+D WIDFVNLRSE+YSENSRIPTM FGTAK+DAYRRD
Sbjct: 132  QGIGVIQCNPDQSKHLETARMRLFDEWIDFVNLRSEDYSENSRIPTMRFGTAKEDAYRRD 191

Query: 584  LTINSLFYNINTNAVEDFTERGIKDLKSGKIVTPLPPKETFLDDPLRVLRAIRFGARFGF 763
            LTINSLFYNINT++VEDFT RGI+DLKSGKIVTPLPPK+TFLDDPLRVLRAIRFGARFGF
Sbjct: 192  LTINSLFYNINTSSVEDFTGRGIEDLKSGKIVTPLPPKDTFLDDPLRVLRAIRFGARFGF 251

Query: 764  VLDKDLKDAASSDEVKAAIADKISRERIGHEIDLMISGNEPVKAMAYICELQLFWVVFSL 943
            +LD++LK AA  D+V+AAIADKISRERIGHEIDLMISGNEPVKAM YIC+L LF VVFSL
Sbjct: 252  ILDEELKLAAGCDDVRAAIADKISRERIGHEIDLMISGNEPVKAMTYICDLLLFSVVFSL 311

Query: 944  PCLPHESGSPNFEDRLCVAYVDAAWSLLQVVGFSTFNDDQRRLYLYGALFLPLRKSMYSD 1123
            P +   + S    DRLC+ Y+DA W+L+Q++G STFND+QRRLYLY ALFLP RK++Y  
Sbjct: 312  PPIVKPAISEEC-DRLCIGYIDAGWNLIQLIGSSTFNDEQRRLYLYAALFLPFRKTLY-- 368

Query: 1124 NKGKKAIKVPVVNHIFRNSLKLKASDAETVINLHVASEQFVSLVPFLASKEMNVEQDSE- 1300
             +G KA K+PVVNHI RNSLKL+ASDA+TV+++H A E+F+SL+PF+ S E     ++E 
Sbjct: 369  -EGGKARKIPVVNHIIRNSLKLRASDADTVVSIHCAVEKFISLIPFIESTESIQISEAEW 427

Query: 1301 -IENFNVPDTSKQRIV 1345
             IE  ++P TSK RI+
Sbjct: 428  GIEILDLPVTSKLRIL 443


>emb|CBI18302.3| unnamed protein product [Vitis vinifera]
          Length = 519

 Score =  573 bits (1477), Expect = e-161
 Identities = 288/395 (72%), Positives = 341/395 (86%), Gaps = 2/395 (0%)
 Frame = +2

Query: 167  VKVKEKIQLNEKEKQIFDRLLQVVTHFNLQTQLRVAGGWVRDKLLGKECYDIDIALDNML 346
            V+V++ I L  KE QIF +LLQVV HF+L+TQLRVAGGWVRDKLLGKECYDIDIALD+ML
Sbjct: 8    VQVRDSIDLTPKETQIFQKLLQVVRHFSLRTQLRVAGGWVRDKLLGKECYDIDIALDDML 67

Query: 347  GKEFCEKVNEFLLHSGEDKCGIGVIQCNPDQSKHLETARMRLYDIWIDFVNLRSENYSEN 526
            G+EFCEK+N++L  +GE+K GIGVIQCNPDQSKHLETARMRL+D WIDFVNLRSE+YSEN
Sbjct: 68   GREFCEKINDYLSCTGEEKQGIGVIQCNPDQSKHLETARMRLFDEWIDFVNLRSEDYSEN 127

Query: 527  SRIPTMTFGTAKDDAYRRDLTINSLFYNINTNAVEDFTERGIKDLKSGKIVTPLPPKETF 706
            SRIPTM FGTAK+DAYRRDLTINSLFYNINT++VEDFT RGI+DLKSGKIVTPLPPK+TF
Sbjct: 128  SRIPTMRFGTAKEDAYRRDLTINSLFYNINTSSVEDFTGRGIEDLKSGKIVTPLPPKDTF 187

Query: 707  LDDPLRVLRAIRFGARFGFVLDKDLKDAASSDEVKAAIADKISRERIGHEIDLMISGNEP 886
            LDDPLRVLRAIRFGARFGF+LD++LK AA  D+V+AAIADKISRERIGHEIDLMISGNEP
Sbjct: 188  LDDPLRVLRAIRFGARFGFILDEELKLAAGCDDVRAAIADKISRERIGHEIDLMISGNEP 247

Query: 887  VKAMAYICELQLFWVVFSLPCLPHESGSPNFEDRLCVAYVDAAWSLLQVVGFSTFNDDQR 1066
            VKAM YIC+L LF VVFSLP +   + S    DRLC+ Y+DA W+L+Q++G STFND+QR
Sbjct: 248  VKAMTYICDLLLFSVVFSLPPIVKPAISEEC-DRLCIGYIDAGWNLIQLIGSSTFNDEQR 306

Query: 1067 RLYLYGALFLPLRKSMYSDNKGKKAIKVPVVNHIFRNSLKLKASDAETVINLHVASEQFV 1246
            RLYLY ALFLP RK++Y   +G KA K+PVVNHI RNSLKL+ASDA+TV+++H A E+F+
Sbjct: 307  RLYLYAALFLPFRKTLY---EGGKARKIPVVNHIIRNSLKLRASDADTVVSIHCAVEKFI 363

Query: 1247 SLVPFLASKEMNVEQDSE--IENFNVPDTSKQRIV 1345
            SL+PF+ S E     ++E  IE  ++P TSK RI+
Sbjct: 364  SLIPFIESTESIQISEAEWGIEILDLPVTSKLRIL 398


>ref|XP_002327340.1| predicted protein [Populus trichocarpa] gi|222835710|gb|EEE74145.1|
            predicted protein [Populus trichocarpa]
          Length = 528

 Score =  535 bits (1379), Expect = e-150
 Identities = 273/397 (68%), Positives = 326/397 (82%), Gaps = 5/397 (1%)
 Frame = +2

Query: 167  VKVKEKIQLNEKEKQIFDRLLQVVTHFNLQTQLRVAGGWVRDKLLGKECYDIDIALDNML 346
            ++VK+KI+LNE EKQIFDRL+  + HFNL T+LRVAGGWVRDKLLGKEC DIDIA+DNML
Sbjct: 14   IEVKDKIELNEVEKQIFDRLVNTLRHFNLNTELRVAGGWVRDKLLGKECCDIDIAIDNML 73

Query: 347  GKEFCEKVNEFLLHSGEDKCGIGVIQCNPDQSKHLETARMRLYDIWIDFVNLRSENYSEN 526
            G EF +KV E+LL +GE+  G+GVI  NPDQSKHLETARMRL D+WIDFVNLRSE+YSEN
Sbjct: 74   GSEFVDKVREYLLSTGEEAHGVGVIPRNPDQSKHLETARMRLLDLWIDFVNLRSEDYSEN 133

Query: 527  SRIPTMTFGTAKDDAYRRDLTINSLFYNINTNAVEDFTERGIKDLKSGKIVTPLPPKETF 706
            SRIPTMTFGTAK+DAYRRDLTINSLFYNINT++VED T RGI+DLKSGKIVTPLPPK+TF
Sbjct: 134  SRIPTMTFGTAKEDAYRRDLTINSLFYNINTSSVEDLTGRGIEDLKSGKIVTPLPPKDTF 193

Query: 707  LDDPLRVLRAIRFGARFGFVLDKDLKDAASSDEVKAAIADKISRERIGHEIDLMISGNEP 886
            LDDPLRVLRAIRFGARFGFVL+++LK+AA+ D+VK A+  KIS+ERIG EIDLMISGN+P
Sbjct: 194  LDDPLRVLRAIRFGARFGFVLEEELKEAAACDDVKNALKAKISKERIGTEIDLMISGNQP 253

Query: 887  VKAMAYICELQLFWVVFSLPCLPHESGSPNFEDR---LCVAYVDAAWSLLQVVGFSTFND 1057
            VKAM YI +L LFWVVF+L    H    P   +    LCVAY+DAAW+L+ ++G S+F  
Sbjct: 254  VKAMTYIADLTLFWVVFNL----HPKVEPTVSEECQGLCVAYLDAAWNLIHLIGGSSFTG 309

Query: 1058 DQRRLYLYGALFLPLRKSMYSDNKGKKAIKVPVVNHIFRNSLKLKASDAETVINLHVASE 1237
            +QRRL LY ALFLPLR ++Y D KGK   KVPVVN+IFR+SLK KASD ETVI +H + E
Sbjct: 310  EQRRLCLYAALFLPLRNTIYKDEKGK---KVPVVNYIFRDSLKQKASDPETVIKIHRSLE 366

Query: 1238 QFVSLVPFLASKE--MNVEQDSEIENFNVPDTSKQRI 1342
            +F++L+P L S +     E D  +E F+VP TSK R+
Sbjct: 367  KFLTLIPLLTSNDDTQPAEVDMGMELFDVPITSKLRV 403


>ref|XP_003556190.1| PREDICTED: CCA tRNA nucleotidyltransferase, mitochondrial-like
            [Glycine max]
          Length = 575

 Score =  513 bits (1321), Expect = e-143
 Identities = 268/404 (66%), Positives = 321/404 (79%), Gaps = 10/404 (2%)
 Frame = +2

Query: 164  EVKVKEKIQLNEKEKQIFDRLLQVVTHFNLQTQLRVAGGWVRDKLLGKECYDIDIALDNM 343
            ++ +++KI L++ E++IFDRLL  + HF+LQTQLRVAGGWVRDKLLGKECYDIDIALDNM
Sbjct: 66   KLHIRDKIDLSDIERRIFDRLLATLRHFHLQTQLRVAGGWVRDKLLGKECYDIDIALDNM 125

Query: 344  LGKEFCEKVNEFLLHSGEDKCGIGVIQCNPDQSKHLETARMRLYDIWIDFVNLRSENYSE 523
            +G EF +KV E+LL  GED  G+ VI+ NPDQSKHLETARMRL+DIWIDFVNLRSE Y+E
Sbjct: 126  MGTEFVDKVREYLLSIGEDAQGVCVIESNPDQSKHLETARMRLFDIWIDFVNLRSEEYTE 185

Query: 524  NSRIPT-MTFGTAKDDAYRRDLTINSLFYNINTNAVEDFTERGIKDLKSGKIVTPLPPKE 700
            NSRIP+   FGTA++DAYRRDLTINSLFYNINT++VEDFT+RGI DLKSGKIVTPLPPK 
Sbjct: 186  NSRIPSKQRFGTAEEDAYRRDLTINSLFYNINTDSVEDFTKRGISDLKSGKIVTPLPPKA 245

Query: 701  TFLDDPLRVLRAIRFGARFGFVLDKDLKDAASSDEVKAAIADKISRERIGHEIDLMISGN 880
            TFLDDPLRVLRAIRFGARF F LD+DLK AA+ D+VK A+A KISRERIG EIDLMISGN
Sbjct: 246  TFLDDPLRVLRAIRFGARFEFTLDEDLKVAAACDDVKDALAAKISRERIGTEIDLMISGN 305

Query: 881  EPVKAMAYICELQLFWVVFSLPCLPHESGSPNFE-------DRLCVAYVDAAWSLLQVVG 1039
            +P+KAM YIC+L LFW+VFSLP        P FE       +RLCV+Y+D AW+L+ ++G
Sbjct: 306  QPIKAMTYICDLTLFWIVFSLP--------PEFEPAISDGCERLCVSYLDTAWNLIHLLG 357

Query: 1040 FSTFNDDQRRLYLYGALFLPLRKSMYSDNKGKKAIKVPVVNHIFRNSLKLKASDAETVIN 1219
             STF  +Q+RL L  ALFLPLR   Y +   KKA K+PVVNHI R SLK KA DAE V+N
Sbjct: 358  ESTFTAEQKRLTLCAALFLPLRNVTYRE---KKAKKIPVVNHIIRESLKRKAKDAEMVLN 414

Query: 1220 LHVASEQFVSLVPFLASKE--MNVEQDSEIENFNVPDTSKQRIV 1345
            LH AS +F+SL+P LAS E    V+ D   +  +VP TS+ R++
Sbjct: 415  LHQASYKFLSLIPCLASSEDVQVVDHDWLRDLVDVPVTSRVRVL 458


>ref|XP_002533879.1| poly(A) polymerase, putative [Ricinus communis]
            gi|223526180|gb|EEF28510.1| poly(A) polymerase, putative
            [Ricinus communis]
          Length = 577

 Score =  510 bits (1314), Expect = e-142
 Identities = 259/416 (62%), Positives = 331/416 (79%), Gaps = 2/416 (0%)
 Frame = +2

Query: 104  KSYNCREVQTMSVSLTDGQQEVKVKEKIQLNEKEKQIFDRLLQVVTHFNLQTQLRVAGGW 283
            + ++CR + T +      Q  ++VK+KI+L E EK+IFDRLL  + HFNLQTQLRVAGGW
Sbjct: 48   RRFSCRAMGTSTP-----QAVIQVKDKIELTEIEKKIFDRLLNTLRHFNLQTQLRVAGGW 102

Query: 284  VRDKLLGKECYDIDIALDNMLGKEFCEKVNEFLLHSGEDKCGIGVIQCNPDQSKHLETAR 463
            VRDKLLGK+CYDIDIA+DNMLG EF +KV E+LL +GE+  G+G+I  NPDQSKHLETAR
Sbjct: 103  VRDKLLGKDCYDIDIAIDNMLGSEFVDKVREYLLSTGEEVGGLGIIPRNPDQSKHLETAR 162

Query: 464  MRLYDIWIDFVNLRSENYSENSRIPTMTFGTAKDDAYRRDLTINSLFYNINTNAVEDFTE 643
            MRL+D+WIDFVNLR E+Y+E+SRIPTM FGTA++DA+RRDLTINSLFYNINT++VED TE
Sbjct: 163  MRLFDLWIDFVNLRCEDYTEDSRIPTMKFGTAEEDAFRRDLTINSLFYNINTSSVEDLTE 222

Query: 644  RGIKDLKSGKIVTPLPPKETFLDDPLRVLRAIRFGARFGFVLDKDLKDAASSDEVKAAIA 823
            RGI+DLK GKIVTPLPPK TFLDDPLRVLRAIRFGARFGF+LD++LK+AA+ D+VK A+A
Sbjct: 223  RGIEDLKFGKIVTPLPPKATFLDDPLRVLRAIRFGARFGFILDEELKEAAACDDVKNALA 282

Query: 824  DKISRERIGHEIDLMISGNEPVKAMAYICELQLFWVVFSLPCLPHESGSPNFEDRLCVAY 1003
             KIS+ERIG+EIDLM+SGN+PVKAM YI +L LFW++F LP     + S     +LC+AY
Sbjct: 283  AKISKERIGNEIDLMLSGNQPVKAMTYIGDLTLFWIIFGLPPKVEPAVSEGCH-KLCIAY 341

Query: 1004 VDAAWSLLQVVGFSTFNDDQRRLYLYGALFLPLRKSMYSDNKGKKAIKVPVVNHIFRNSL 1183
            +DA W+L+Q +  S F D+QRRL LY ALFLP R  +Y + KGK    VPVVN IF++SL
Sbjct: 342  LDATWNLIQSIRSSFFTDEQRRLSLYAALFLPFRNIIYIE-KGK---NVPVVNFIFKDSL 397

Query: 1184 KLKASDAETVINLHVASEQFVSLVPFLASKE--MNVEQDSEIENFNVPDTSKQRIV 1345
            K KASD+ETV+ +H + E+F++++P L S +     E D  +E  +VP ++K R++
Sbjct: 398  KQKASDSETVMKIHKSLEKFLNIIPLLTSDDDTQPAEVDWALELIDVPFSAKLRVL 453