BLASTX nr result

ID: Coptis21_contig00027629 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00027629
         (283 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002331318.1| predicted protein [Populus trichocarpa] gi|2...    92   3e-17
ref|XP_002335029.1| predicted protein [Populus trichocarpa] gi|2...    92   3e-17
ref|XP_003539629.1| PREDICTED: NADH kinase-like [Glycine max]          86   3e-15
ref|XP_003543186.1| PREDICTED: NADH kinase-like [Glycine max]          82   3e-14
ref|NP_001132396.1| uncharacterized protein LOC100193842 [Zea ma...    81   8e-14

>ref|XP_002331318.1| predicted protein [Populus trichocarpa] gi|222873901|gb|EEF11032.1|
           predicted protein [Populus trichocarpa]
          Length = 309

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 47/78 (60%), Positives = 60/78 (76%), Gaps = 7/78 (8%)
 Frame = -3

Query: 215 MWRKRLLLLLKPFNVYPT------SRISNSKVLSFLDNRRKVHKDAIRFCENILRRKS-L 57
           M R+RLLL+LKPF+VY        S I+NS+   +LDNRRKVHKDAI FC++ILR+KS +
Sbjct: 1   MARRRLLLMLKPFDVYQFGQSNGGSSITNSQAFRYLDNRRKVHKDAINFCQDILRKKSNI 60

Query: 56  DWEPLLRNNLVQPIRDVE 3
           DWEP+LR NL QPIR+ +
Sbjct: 61  DWEPILRTNLSQPIRNFD 78


>ref|XP_002335029.1| predicted protein [Populus trichocarpa] gi|222832650|gb|EEE71127.1|
           predicted protein [Populus trichocarpa]
          Length = 116

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 47/78 (60%), Positives = 60/78 (76%), Gaps = 7/78 (8%)
 Frame = -3

Query: 215 MWRKRLLLLLKPFNVYPT------SRISNSKVLSFLDNRRKVHKDAIRFCENILRRKS-L 57
           M R+RLLL+LKPF+VY        S I+NS+   +LDNRRKVHKDAI FC++ILR+KS +
Sbjct: 1   MARRRLLLMLKPFDVYQFGQSNGGSSITNSQAFRYLDNRRKVHKDAINFCQDILRKKSNI 60

Query: 56  DWEPLLRNNLVQPIRDVE 3
           DWEP+LR NL QPIR+ +
Sbjct: 61  DWEPILRTNLSQPIRNFD 78


>ref|XP_003539629.1| PREDICTED: NADH kinase-like [Glycine max]
          Length = 303

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 40/71 (56%), Positives = 53/71 (74%)
 Frame = -3

Query: 215 MWRKRLLLLLKPFNVYPTSRISNSKVLSFLDNRRKVHKDAIRFCENILRRKSLDWEPLLR 36
           M  KRLLLLLKP  V+     +N ++L FL+NRRKVH DAI FC+ IL++KS++W+ + R
Sbjct: 1   MMLKRLLLLLKPITVFSPPSHTNPQILQFLENRRKVHHDAINFCQAILQKKSIEWKAVHR 60

Query: 35  NNLVQPIRDVE 3
           NNL QPI DV+
Sbjct: 61  NNLSQPINDVD 71


>ref|XP_003543186.1| PREDICTED: NADH kinase-like [Glycine max]
          Length = 304

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 39/68 (57%), Positives = 51/68 (75%)
 Frame = -3

Query: 206 KRLLLLLKPFNVYPTSRISNSKVLSFLDNRRKVHKDAIRFCENILRRKSLDWEPLLRNNL 27
           KRLLLLLKP +V       N ++L FL+NRRKVH DAI FC+ IL++KS++W+ + RNNL
Sbjct: 4   KRLLLLLKPLSVSSPPSHINPQILQFLENRRKVHHDAINFCQAILQKKSIEWKAVHRNNL 63

Query: 26  VQPIRDVE 3
            QPI DV+
Sbjct: 64  SQPINDVD 71


>ref|NP_001132396.1| uncharacterized protein LOC100193842 [Zea mays]
           gi|195624430|gb|ACG34045.1| NADH kinase [Zea mays]
          Length = 331

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 43/91 (47%), Positives = 57/91 (62%), Gaps = 20/91 (21%)
 Frame = -3

Query: 215 MWRKRLLLLLKPFNVYPTS--------------------RISNSKVLSFLDNRRKVHKDA 96
           M R+R+LL LKPF+VYP                      R +N KVLS+LD+R +VHKD 
Sbjct: 1   MARRRVLLFLKPFDVYPPRPYVGAAASSPTSAPSSLPQPRAANPKVLSYLDDRCRVHKDT 60

Query: 95  IRFCENILRRKSLDWEPLLRNNLVQPIRDVE 3
           I  C+++L+RKSLDW  + RN+L QPIRDV+
Sbjct: 61  IDLCQSVLQRKSLDWIAVQRNHLCQPIRDVD 91


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