BLASTX nr result

ID: Coptis21_contig00027618 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00027618
         (372 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADL36798.1| NAC domain class transcription factor [Malus x do...   188   3e-46
ref|NP_179397.1| vascular related NAC-domain protein 1 [Arabidop...   187   8e-46
gb|ADR00338.1| wood-associated NAC domain transcription factor 5...   187   1e-45
ref|XP_002266706.2| PREDICTED: NAC domain-containing protein 7-l...   186   1e-45
dbj|BAK14359.1| transcription factor [Populus trichocarpa]            186   1e-45

>gb|ADL36798.1| NAC domain class transcription factor [Malus x domestica]
          Length = 345

 Score =  188 bits (478), Expect = 3e-46
 Identities = 87/116 (75%), Positives = 96/116 (82%)
 Frame = -2

Query: 371 HKDKKYPTGTRTNRATMAGFWKATGRDKAIYDKASIIGMRKTLVFYKGRAPNGLKSDWIM 192
           HKDKKYPTGTRTNRATMAGFWKATGRDK++YDKA +IGMRKTLVFYKGRAPNG K+DWIM
Sbjct: 73  HKDKKYPTGTRTNRATMAGFWKATGRDKSVYDKAKLIGMRKTLVFYKGRAPNGQKTDWIM 132

Query: 191 HEYRLXXXXXXXXXXXGWVVCRAFKKRPSMQTRTDERWDSSYFYEEINGINSIMDP 24
           HEYRL           GWVVCRAFKKR S Q ++ E WDSSYFYEE+NG+ S+ DP
Sbjct: 133 HEYRLESDENGPPQEEGWVVCRAFKKRISSQNKSIEGWDSSYFYEELNGLTSVADP 188


>ref|NP_179397.1| vascular related NAC-domain protein 1 [Arabidopsis thaliana]
           gi|4406812|gb|AAD20120.1| putative NAM (no apical
           meristem)-like protein [Arabidopsis thaliana]
           gi|330251628|gb|AEC06722.1| vascular related NAC-domain
           protein 1 [Arabidopsis thaliana]
          Length = 365

 Score =  187 bits (475), Expect = 8e-46
 Identities = 88/119 (73%), Positives = 96/119 (80%), Gaps = 2/119 (1%)
 Frame = -2

Query: 371 HKDKKYPTGTRTNRATMAGFWKATGRDKAIYDKASIIGMRKTLVFYKGRAPNGLKSDWIM 192
           HKDKKYPTGTRTNRATMAGFWKATGRDKA+YDK  +IGMRKTLVFYKGRAPNG KSDWIM
Sbjct: 73  HKDKKYPTGTRTNRATMAGFWKATGRDKAVYDKTKLIGMRKTLVFYKGRAPNGKKSDWIM 132

Query: 191 HEYRLXXXXXXXXXXXGWVVCRAFKKRPSMQTRTDERWDSSYFYEEI--NGINSIMDPI 21
           HEYRL           GWVVCRAFKKR + Q +  E W SSYFY+E+  NG+NS+MDPI
Sbjct: 133 HEYRLESDENAPPQEEGWVVCRAFKKRATGQAKNTETWSSSYFYDEVAPNGVNSVMDPI 191


>gb|ADR00338.1| wood-associated NAC domain transcription factor 5A [Populus
           trichocarpa] gi|327397082|dbj|BAK14358.1| transcription
           factor [Populus trichocarpa]
          Length = 345

 Score =  187 bits (474), Expect = 1e-45
 Identities = 86/123 (69%), Positives = 100/123 (81%)
 Frame = -2

Query: 371 HKDKKYPTGTRTNRATMAGFWKATGRDKAIYDKASIIGMRKTLVFYKGRAPNGLKSDWIM 192
           HKDKKYPTGTRTNRATMAGFWKATGRDK++YDK  +IGMRKTLVFYKGRAPNG K+DWIM
Sbjct: 73  HKDKKYPTGTRTNRATMAGFWKATGRDKSVYDKTKLIGMRKTLVFYKGRAPNGQKTDWIM 132

Query: 191 HEYRLXXXXXXXXXXXGWVVCRAFKKRPSMQTRTDERWDSSYFYEEINGINSIMDPIHTT 12
           HEYRL           GWVVCRAFKKR + Q ++ E WDSSYFYEE +G++S++DP+   
Sbjct: 133 HEYRLESDENGPPQEEGWVVCRAFKKRTTGQNKSIEGWDSSYFYEESSGVSSVVDPMDYI 192

Query: 11  TRK 3
           TR+
Sbjct: 193 TRQ 195


>ref|XP_002266706.2| PREDICTED: NAC domain-containing protein 7-like [Vitis vinifera]
          Length = 358

 Score =  186 bits (473), Expect = 1e-45
 Identities = 85/123 (69%), Positives = 101/123 (82%)
 Frame = -2

Query: 371 HKDKKYPTGTRTNRATMAGFWKATGRDKAIYDKASIIGMRKTLVFYKGRAPNGLKSDWIM 192
           HKDKKYPTGTRTNRATMAGFWKATGRDKA+YDK  +IGMRKTLVFYKGRAPNG K+DWIM
Sbjct: 95  HKDKKYPTGTRTNRATMAGFWKATGRDKAVYDKTKLIGMRKTLVFYKGRAPNGQKTDWIM 154

Query: 191 HEYRLXXXXXXXXXXXGWVVCRAFKKRPSMQTRTDERWDSSYFYEEINGINSIMDPIHTT 12
           HEYRL           GWVVCRAFKKR + Q+++ E WD+SYFY+E +G++++MDPI   
Sbjct: 155 HEYRLESEENGPPQEEGWVVCRAFKKRTTSQSKSIEGWDTSYFYDEPSGVSTVMDPIDYI 214

Query: 11  TRK 3
           +R+
Sbjct: 215 SRQ 217


>dbj|BAK14359.1| transcription factor [Populus trichocarpa]
          Length = 342

 Score =  186 bits (473), Expect = 1e-45
 Identities = 87/123 (70%), Positives = 99/123 (80%)
 Frame = -2

Query: 371 HKDKKYPTGTRTNRATMAGFWKATGRDKAIYDKASIIGMRKTLVFYKGRAPNGLKSDWIM 192
           HKDKKYPTGTRTNRATMAGFWKATGRDKA+YDK  +IGMRKTLVFYKGRAPNG K+ WIM
Sbjct: 73  HKDKKYPTGTRTNRATMAGFWKATGRDKAVYDKTKLIGMRKTLVFYKGRAPNGQKTHWIM 132

Query: 191 HEYRLXXXXXXXXXXXGWVVCRAFKKRPSMQTRTDERWDSSYFYEEINGINSIMDPIHTT 12
           HEYRL           GWVVCRAFKKR + QT++ E WDSSYFYEE +G++S++DPI   
Sbjct: 133 HEYRLESDENGPPQEEGWVVCRAFKKRTTGQTKSIEGWDSSYFYEESSGVSSVVDPIDYI 192

Query: 11  TRK 3
            R+
Sbjct: 193 ARQ 195


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