BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00027575
         (549 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P08927.2|RUBB_PEA RecName: Full=RuBisCO large subunit-binding...    57   1e-06
ref|XP_002284134.1| PREDICTED: ruBisCO large subunit-binding pro...    57   1e-06
ref|XP_003546771.1| PREDICTED: ruBisCO large subunit-binding pro...    56   4e-06
ref|XP_003531529.1| PREDICTED: ruBisCO large subunit-binding pro...    56   4e-06
ref|XP_002285746.1| PREDICTED: ruBisCO large subunit-binding pro...    56   4e-06

>sp|P08927.2|RUBB_PEA RecName: Full=RuBisCO large subunit-binding protein subunit beta,
           chloroplastic; AltName: Full=60 kDa chaperonin subunit
           beta; AltName: Full=CPN-60 beta; Flags: Precursor
           gi|806808|gb|AAA66365.1| chaperonin precursor [Pisum
           sativum]
          Length = 595

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 26/28 (92%), Positives = 26/28 (92%)
 Frame = +1

Query: 4   SDNPKYGYNAATEKYEDLMIAGIIDPTK 87
           SDNPKYGYNAAT KYEDLM AGIIDPTK
Sbjct: 522 SDNPKYGYNAATGKYEDLMAAGIIDPTK 549


>ref|XP_002284134.1| PREDICTED: ruBisCO large subunit-binding protein subunit beta,
           chloroplastic [Vitis vinifera]
           gi|297743227|emb|CBI36094.3| unnamed protein product
           [Vitis vinifera]
          Length = 609

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 26/28 (92%), Positives = 26/28 (92%)
 Frame = +1

Query: 4   SDNPKYGYNAATEKYEDLMIAGIIDPTK 87
           SDNPKYGYNAAT KYEDLM AGIIDPTK
Sbjct: 537 SDNPKYGYNAATGKYEDLMAAGIIDPTK 564


>ref|XP_003546771.1| PREDICTED: ruBisCO large subunit-binding protein subunit beta,
           chloroplastic-like [Glycine max]
          Length = 591

 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 25/28 (89%), Positives = 26/28 (92%)
 Frame = +1

Query: 4   SDNPKYGYNAATEKYEDLMIAGIIDPTK 87
           SDNP+YGYNAAT KYEDLM AGIIDPTK
Sbjct: 519 SDNPRYGYNAATGKYEDLMSAGIIDPTK 546


>ref|XP_003531529.1| PREDICTED: ruBisCO large subunit-binding protein subunit beta,
           chloroplastic-like [Glycine max]
          Length = 592

 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 25/28 (89%), Positives = 26/28 (92%)
 Frame = +1

Query: 4   SDNPKYGYNAATEKYEDLMIAGIIDPTK 87
           SDNP+YGYNAAT KYEDLM AGIIDPTK
Sbjct: 520 SDNPRYGYNAATGKYEDLMSAGIIDPTK 547


>ref|XP_002285746.1| PREDICTED: ruBisCO large subunit-binding protein subunit beta,
           chloroplastic [Vitis vinifera]
           gi|297746501|emb|CBI16557.3| unnamed protein product
           [Vitis vinifera]
          Length = 608

 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 25/28 (89%), Positives = 26/28 (92%)
 Frame = +1

Query: 4   SDNPKYGYNAATEKYEDLMIAGIIDPTK 87
           SDNPKYG+NAAT KYEDLM AGIIDPTK
Sbjct: 536 SDNPKYGFNAATGKYEDLMAAGIIDPTK 563