BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00027571
         (358 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002320506.1| f-box family protein [Populus trichocarpa] g...    57   2e-06
ref|XP_002301588.1| f-box family protein [Populus trichocarpa] g...    56   3e-06

>ref|XP_002320506.1| f-box family protein [Populus trichocarpa]
           gi|222861279|gb|EEE98821.1| f-box family protein
           [Populus trichocarpa]
          Length = 422

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 37/115 (32%), Positives = 57/115 (49%), Gaps = 3/115 (2%)
 Frame = +2

Query: 2   CKTWYKLSHHPRFAKIHYKWAIQNCCSPCVVL-CDFV--NGFWLIDHQVFDNFETSAPVH 172
           C+ W  L   P+   ++   + Q+   PC++L CDF   N  + +D    +  E    V 
Sbjct: 52  CRAWRALVQDPQLVDLYLSCSTQDTDHPCLILHCDFPIRNNLYFVDFAAHE--EEKEKVK 109

Query: 173 RLDFLNESDFQPKLDVIGFVNGLLCLSENPLLCDYPVFYYICNPFTGEHVALPRA 337
           R+     S   P+ +V+G  NGLLCLS++     Y    YI NPFTG +  LP++
Sbjct: 110 RIP-APFSSMMPEFEVVGSCNGLLCLSDSL----YNDSLYIYNPFTGCYKELPKS 159


>ref|XP_002301588.1| f-box family protein [Populus trichocarpa]
           gi|222843314|gb|EEE80861.1| f-box family protein
           [Populus trichocarpa]
          Length = 408

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 37/115 (32%), Positives = 56/115 (48%), Gaps = 3/115 (2%)
 Frame = +2

Query: 2   CKTWYKLSHHPRFAKIHYKWAIQNCCSPCVVL-CDFV--NGFWLIDHQVFDNFETSAPVH 172
           C+ W  ++  P    ++   + Q    PCV+L CDF   N  + +D    +  +      
Sbjct: 52  CRAWRAMALDPEVVNLYLSCSTQET-DPCVILHCDFPIRNNLYFVDFAAHEEEKEKVKRI 110

Query: 173 RLDFLNESDFQPKLDVIGFVNGLLCLSENPLLCDYPVFYYICNPFTGEHVALPRA 337
           R  F   S   P+ +V+G  NGLLCLS++ L  D     YI NPFTG +  LP++
Sbjct: 111 RAPF---SSMMPEFEVVGSCNGLLCLSDS-LFND---SLYIYNPFTGRYKELPKS 158