BLASTX nr result

ID: Coptis21_contig00027569 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00027569
         (426 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002322801.1| predicted protein [Populus trichocarpa] gi|2...    89   4e-16
ref|XP_003520709.1| PREDICTED: uncharacterized protein LOC100804...    86   2e-15
ref|XP_003519129.1| PREDICTED: uncharacterized protein LOC100818...    86   4e-15
ref|XP_002530159.1| conserved hypothetical protein [Ricinus comm...    86   4e-15
ref|XP_002308445.1| predicted protein [Populus trichocarpa] gi|2...    85   5e-15

>ref|XP_002322801.1| predicted protein [Populus trichocarpa] gi|222867431|gb|EEF04562.1|
           predicted protein [Populus trichocarpa]
          Length = 256

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 63/146 (43%), Positives = 72/146 (49%), Gaps = 25/146 (17%)
 Frame = -2

Query: 365 TVAVDTGCS-CGKPKLSNLFFPK--LKTKTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 195
           TV+V+ GCS C KPKLSN+F PK  L+T T                              
Sbjct: 12  TVSVNLGCSSCKKPKLSNIFQPKPKLQTPTYRKHKKDLYCSSSSTSSTKITTNHSRNDHE 71

Query: 194 XXXXXEYASKSSST---------------------SRVG-ESVAVVKDSHDPYLDFRHSM 81
                   S S  T                      RVG ESVAV KDS DPYLDFRHSM
Sbjct: 72  YHDTPSTFSPSMDTPPYFFSDTDNSGTCSRAVRGFGRVGGESVAVEKDSDDPYLDFRHSM 131

Query: 80  LQMILEKEIYSKEELKELLDCFLSLN 3
           LQMILEK+IYSK++L++LLDCFL LN
Sbjct: 132 LQMILEKQIYSKDDLRQLLDCFLQLN 157


>ref|XP_003520709.1| PREDICTED: uncharacterized protein LOC100804319 [Glycine max]
          Length = 158

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 52/122 (42%), Positives = 63/122 (51%), Gaps = 1/122 (0%)
 Frame = -2

Query: 365 TVAVDTGC-SCGKPKLSNLFFPKLKTKTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 189
           TV+V  GC +C +P L  +F PK K K                                 
Sbjct: 12  TVSVKLGCGTCRRPSLRRIFHPKPKPKNLNNNTNYRKHKHSSSSSASSSFFASQ------ 65

Query: 188 XXXEYASKSSSTSRVGESVAVVKDSHDPYLDFRHSMLQMILEKEIYSKEELKELLDCFLS 9
               +   S+S +    SVAV KDS DPYLDFRHSMLQMILE EIYSK++L+ELL+CFL 
Sbjct: 66  ----WGGDSTSATPTNTSVAVEKDSDDPYLDFRHSMLQMILENEIYSKQDLRELLNCFLQ 121

Query: 8   LN 3
           LN
Sbjct: 122 LN 123


>ref|XP_003519129.1| PREDICTED: uncharacterized protein LOC100818531 [Glycine max]
          Length = 169

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 54/123 (43%), Positives = 64/123 (52%), Gaps = 2/123 (1%)
 Frame = -2

Query: 365 TVAVDTGC-SCGKPKL-SNLFFPKLKTKTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 192
           TV+V  GC SC +P L  ++F PK + K                                
Sbjct: 12  TVSVSLGCGSCRRPGLLRHIFHPKRRPKKPAYQAHGFHWDDTATSSSTTNASTAATFSPC 71

Query: 191 XXXXEYASKSSSTSRVGESVAVVKDSHDPYLDFRHSMLQMILEKEIYSKEELKELLDCFL 12
                YA  S+  S  G  VAV KDS DPYLDFRHSMLQMILE EIYSK++L+ELL+CFL
Sbjct: 72  -----YAEASAQFSNYGRGVAVEKDSDDPYLDFRHSMLQMILENEIYSKDDLRELLNCFL 126

Query: 11  SLN 3
            LN
Sbjct: 127 QLN 129


>ref|XP_002530159.1| conserved hypothetical protein [Ricinus communis]
           gi|223530320|gb|EEF32214.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 209

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 41/47 (87%), Positives = 44/47 (93%)
 Frame = -2

Query: 143 GESVAVVKDSHDPYLDFRHSMLQMILEKEIYSKEELKELLDCFLSLN 3
           GESVAV KDS DPYLDFRHSMLQMILEKEIYSK++LKELL+CFL LN
Sbjct: 111 GESVAVEKDSDDPYLDFRHSMLQMILEKEIYSKDDLKELLNCFLQLN 157


>ref|XP_002308445.1| predicted protein [Populus trichocarpa] gi|222854421|gb|EEE91968.1|
           predicted protein [Populus trichocarpa]
          Length = 116

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 40/47 (85%), Positives = 44/47 (93%)
 Frame = -2

Query: 143 GESVAVVKDSHDPYLDFRHSMLQMILEKEIYSKEELKELLDCFLSLN 3
           GESVAV KDS DPYLDFRHSMLQMILEKEIYSK++L++LLDCFL LN
Sbjct: 29  GESVAVEKDSDDPYLDFRHSMLQMILEKEIYSKDDLRQLLDCFLQLN 75


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