BLASTX nr result

ID: Coptis21_contig00027536 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00027536
         (200 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003521529.1| PREDICTED: sex determination protein tassels...   113   2e-23
ref|XP_003521528.1| PREDICTED: sex determination protein tassels...   113   2e-23
gb|ACU19624.1| unknown [Glycine max]                                  113   2e-23
ref|XP_002321040.1| predicted protein [Populus trichocarpa] gi|2...   105   3e-21
gb|ABK94192.1| unknown [Populus trichocarpa]                          105   3e-21

>ref|XP_003521529.1| PREDICTED: sex determination protein tasselseed-2-like isoform 2
           [Glycine max]
          Length = 301

 Score =  113 bits (282), Expect = 2e-23
 Identities = 53/66 (80%), Positives = 63/66 (95%)
 Frame = -1

Query: 200 RLEDKVALITGAASGIGKATATEFINNGAKVVLADVQDELGQQTASELGPNATFISCNVT 21
           +L+DKVALITGAASGIGKATAT+FINNGAKV++AD+  ELGQ+TA ELGPNATFI+C+VT
Sbjct: 35  KLQDKVALITGAASGIGKATATKFINNGAKVIIADIDQELGQETAKELGPNATFIACDVT 94

Query: 20  QESDVS 3
           QESD+S
Sbjct: 95  QESDIS 100


>ref|XP_003521528.1| PREDICTED: sex determination protein tasselseed-2-like isoform 1
           [Glycine max]
          Length = 327

 Score =  113 bits (282), Expect = 2e-23
 Identities = 53/66 (80%), Positives = 63/66 (95%)
 Frame = -1

Query: 200 RLEDKVALITGAASGIGKATATEFINNGAKVVLADVQDELGQQTASELGPNATFISCNVT 21
           +L+DKVALITGAASGIGKATAT+FINNGAKV++AD+  ELGQ+TA ELGPNATFI+C+VT
Sbjct: 61  KLQDKVALITGAASGIGKATATKFINNGAKVIIADIDQELGQETAKELGPNATFIACDVT 120

Query: 20  QESDVS 3
           QESD+S
Sbjct: 121 QESDIS 126


>gb|ACU19624.1| unknown [Glycine max]
          Length = 197

 Score =  113 bits (282), Expect = 2e-23
 Identities = 53/66 (80%), Positives = 63/66 (95%)
 Frame = -1

Query: 200 RLEDKVALITGAASGIGKATATEFINNGAKVVLADVQDELGQQTASELGPNATFISCNVT 21
           +L+DKVALITGAASGIGKATAT+FINNGAKV++AD+  ELGQ+TA ELGPNATFI+C+VT
Sbjct: 35  KLQDKVALITGAASGIGKATATKFINNGAKVIIADIDQELGQETAKELGPNATFIACDVT 94

Query: 20  QESDVS 3
           QESD+S
Sbjct: 95  QESDIS 100


>ref|XP_002321040.1| predicted protein [Populus trichocarpa] gi|222861813|gb|EEE99355.1|
           predicted protein [Populus trichocarpa]
          Length = 271

 Score =  105 bits (263), Expect = 3e-21
 Identities = 51/66 (77%), Positives = 63/66 (95%)
 Frame = -1

Query: 200 RLEDKVALITGAASGIGKATATEFINNGAKVVLADVQDELGQQTASELGPNATFISCNVT 21
           +LE KVALITGAASGIGKATA +FIN+GA+VV+AD+Q +LGQ+TA+ELGP+ATFISC+VT
Sbjct: 10  KLEGKVALITGAASGIGKATAAKFINHGARVVIADIQHQLGQETANELGPDATFISCDVT 69

Query: 20  QESDVS 3
           +ESDVS
Sbjct: 70  KESDVS 75


>gb|ABK94192.1| unknown [Populus trichocarpa]
          Length = 295

 Score =  105 bits (263), Expect = 3e-21
 Identities = 51/66 (77%), Positives = 63/66 (95%)
 Frame = -1

Query: 200 RLEDKVALITGAASGIGKATATEFINNGAKVVLADVQDELGQQTASELGPNATFISCNVT 21
           +LE KVALITGAASGIGKATA +FIN+GA+VV+AD+Q +LGQ+TA+ELGP+ATFISC+VT
Sbjct: 32  KLEGKVALITGAASGIGKATAAKFINHGARVVIADIQHQLGQETANELGPDATFISCDVT 91

Query: 20  QESDVS 3
           +ESDVS
Sbjct: 92  KESDVS 97


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