BLASTX nr result

ID: Coptis21_contig00027522 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00027522
         (347 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001236496.1| uncharacterized protein LOC100527214 [Glycin...    44   2e-09
ref|XP_002329052.1| predicted protein [Populus trichocarpa] gi|2...    44   3e-09
gb|ABK95862.1| unknown [Populus trichocarpa]                           44   3e-09
ref|XP_002527410.1| RNA binding protein, putative [Ricinus commu...    44   3e-09
ref|XP_004146824.1| PREDICTED: uncharacterized protein LOC101205...    44   6e-09

>ref|NP_001236496.1| uncharacterized protein LOC100527214 [Glycine max]
           gi|255631798|gb|ACU16266.1| unknown [Glycine max]
          Length = 240

 Score = 44.3 bits (103), Expect(2) = 2e-09
 Identities = 18/20 (90%), Positives = 20/20 (100%)
 Frame = +2

Query: 35  QLYARRHFLYPPLSIEEYND 94
           +LYARRHFL+PPLSIEEYND
Sbjct: 116 ELYARRHFLFPPLSIEEYND 135



 Score = 42.7 bits (99), Expect(2) = 2e-09
 Identities = 20/26 (76%), Positives = 23/26 (88%)
 Frame = +3

Query: 99  MAVVRCEAQDALLKKLLHQDFLSEDE 176
           MAVVRCEAQDALL+KLL  +FLS+ E
Sbjct: 138 MAVVRCEAQDALLQKLLESNFLSDQE 163


>ref|XP_002329052.1| predicted protein [Populus trichocarpa] gi|222839723|gb|EEE78046.1|
           predicted protein [Populus trichocarpa]
          Length = 246

 Score = 43.9 bits (102), Expect(2) = 3e-09
 Identities = 20/26 (76%), Positives = 25/26 (96%)
 Frame = +3

Query: 99  MAVVRCEAQDALLKKLLHQDFLSEDE 176
           MAVVRCEAQDALL+KLL+ ++LSE+E
Sbjct: 146 MAVVRCEAQDALLQKLLNDNYLSEEE 171



 Score = 42.4 bits (98), Expect(2) = 3e-09
 Identities = 17/20 (85%), Positives = 20/20 (100%)
 Frame = +2

Query: 35  QLYARRHFLYPPLSIEEYND 94
           +LYARRHFL+PPLSIEE+ND
Sbjct: 124 ELYARRHFLFPPLSIEEHND 143


>gb|ABK95862.1| unknown [Populus trichocarpa]
          Length = 246

 Score = 43.9 bits (102), Expect(2) = 3e-09
 Identities = 20/26 (76%), Positives = 25/26 (96%)
 Frame = +3

Query: 99  MAVVRCEAQDALLKKLLHQDFLSEDE 176
           MAVVRCEAQDALL+KLL+ ++LSE+E
Sbjct: 146 MAVVRCEAQDALLQKLLNDNYLSEEE 171



 Score = 42.4 bits (98), Expect(2) = 3e-09
 Identities = 17/20 (85%), Positives = 20/20 (100%)
 Frame = +2

Query: 35  QLYARRHFLYPPLSIEEYND 94
           +LYARRHFL+PPLSIEE+ND
Sbjct: 124 ELYARRHFLFPPLSIEEHND 143


>ref|XP_002527410.1| RNA binding protein, putative [Ricinus communis]
           gi|223533220|gb|EEF34976.1| RNA binding protein,
           putative [Ricinus communis]
          Length = 248

 Score = 44.3 bits (103), Expect(2) = 3e-09
 Identities = 18/20 (90%), Positives = 20/20 (100%)
 Frame = +2

Query: 35  QLYARRHFLYPPLSIEEYND 94
           +LYARRHFL+PPLSIEEYND
Sbjct: 122 ELYARRHFLFPPLSIEEYND 141



 Score = 41.6 bits (96), Expect(2) = 3e-09
 Identities = 19/26 (73%), Positives = 24/26 (92%)
 Frame = +3

Query: 99  MAVVRCEAQDALLKKLLHQDFLSEDE 176
           M+VVRCEAQDALL KLL+ +FLS++E
Sbjct: 144 MSVVRCEAQDALLHKLLNDNFLSKEE 169


>ref|XP_004146824.1| PREDICTED: uncharacterized protein LOC101205919 [Cucumis sativus]
          Length = 245

 Score = 44.3 bits (103), Expect(2) = 6e-09
 Identities = 18/20 (90%), Positives = 20/20 (100%)
 Frame = +2

Query: 35  QLYARRHFLYPPLSIEEYND 94
           +LYARRHFL+PPLSIEEYND
Sbjct: 121 ELYARRHFLFPPLSIEEYND 140



 Score = 40.8 bits (94), Expect(2) = 6e-09
 Identities = 19/26 (73%), Positives = 23/26 (88%)
 Frame = +3

Query: 99  MAVVRCEAQDALLKKLLHQDFLSEDE 176
           MAVVRCEAQD LL+KLL+ +FL+E E
Sbjct: 143 MAVVRCEAQDVLLQKLLNDNFLTEAE 168


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