BLASTX nr result
ID: Coptis21_contig00027512
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00027512 (576 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002282919.1| PREDICTED: probable RNA helicase SDE3 [Vitis... 69 4e-10 emb|CAN83068.1| hypothetical protein VITISV_014567 [Vitis vinifera] 69 4e-10 ref|XP_002517101.1| ATP-dependent helicase NAM7, putative [Ricin... 64 1e-08 ref|XP_003595606.1| hypothetical protein MTR_2g049990 [Medicago ... 57 2e-06 ref|XP_003517564.1| PREDICTED: probable RNA helicase SDE3-like [... 56 4e-06 >ref|XP_002282919.1| PREDICTED: probable RNA helicase SDE3 [Vitis vinifera] gi|297737082|emb|CBI26283.3| unnamed protein product [Vitis vinifera] Length = 877 Score = 69.3 bits (168), Expect = 4e-10 Identities = 36/99 (36%), Positives = 53/99 (53%) Frame = +1 Query: 148 DPYWDKLLRYCSDNNSYQGCPLPERQEEIPEEDFPLSQKLYYEQDNXXXXXXXXXXXXXL 327 D YW+K+L +CSDN+SYQGC LPERQ+ + +E P+ +E+ Sbjct: 800 DLYWNKILWHCSDNDSYQGCALPERQDFVDKE--PVQFSFNHEE---------------- 841 Query: 328 NIAENPKGVRDVTEWSDDCRSTETPVPQHNQAIWSDGWK 444 ENP+ +V + ++ E P P ++A WSDGWK Sbjct: 842 ---ENPQPSNEVERGEEPFQAEEIPKPVKDEAEWSDGWK 877 >emb|CAN83068.1| hypothetical protein VITISV_014567 [Vitis vinifera] Length = 877 Score = 69.3 bits (168), Expect = 4e-10 Identities = 36/99 (36%), Positives = 53/99 (53%) Frame = +1 Query: 148 DPYWDKLLRYCSDNNSYQGCPLPERQEEIPEEDFPLSQKLYYEQDNXXXXXXXXXXXXXL 327 D YW+K+L +CSDN+SYQGC LPERQ+ + +E P+ +E+ Sbjct: 800 DLYWNKILWHCSDNDSYQGCALPERQDFVDKE--PVQFSFNHEE---------------- 841 Query: 328 NIAENPKGVRDVTEWSDDCRSTETPVPQHNQAIWSDGWK 444 ENP+ +V + ++ E P P ++A WSDGWK Sbjct: 842 ---ENPQPSNEVERGEEPFQAEEIPKPVKDEAEWSDGWK 877 >ref|XP_002517101.1| ATP-dependent helicase NAM7, putative [Ricinus communis] gi|223543736|gb|EEF45264.1| ATP-dependent helicase NAM7, putative [Ricinus communis] Length = 882 Score = 64.3 bits (155), Expect = 1e-08 Identities = 36/99 (36%), Positives = 47/99 (47%) Frame = +1 Query: 148 DPYWDKLLRYCSDNNSYQGCPLPERQEEIPEEDFPLSQKLYYEQDNXXXXXXXXXXXXXL 327 DP+W KLL YC+D+ SYQGC LPE +E + E Y QD+ Sbjct: 803 DPHWSKLLWYCADHESYQGCGLPEGEEYVEE---------YQIQDDGANYDYYNG----- 848 Query: 328 NIAENPKGVRDVTEWSDDCRSTETPVPQHNQAIWSDGWK 444 NP+ + W+ D ETP P ++ WSDGWK Sbjct: 849 ----NPQSTEE-HGWNQDYCQAETPKPVTDETEWSDGWK 882 >ref|XP_003595606.1| hypothetical protein MTR_2g049990 [Medicago truncatula] gi|355484654|gb|AES65857.1| hypothetical protein MTR_2g049990 [Medicago truncatula] Length = 940 Score = 57.4 bits (137), Expect = 2e-06 Identities = 44/155 (28%), Positives = 66/155 (42%), Gaps = 12/155 (7%) Frame = +1 Query: 148 DPYWDKLLRYCSDNNSYQGCPLPERQEEIPEEDFPLSQKLYYEQDNXXXXXXXXXXXXXL 327 D +W ++L +C DN+SY GC LPER E +E + Y++ N Sbjct: 800 DDHWSQMLWHCVDNSSYLGCSLPERIEHY-DEGVGENSGFGYDEGNTWP----------- 847 Query: 328 NIAENPKGVRDVTEWSDDCRSTETPVPQHNQAIWSDGWK--PTEAPMPVADGWNSREIFK 501 + N +G +D + +E P P ++ WSDGW P+ DGWN+ Sbjct: 848 --SNNIEGGQDFYQ-------SEFPKPGTDETGWSDGWNTFPSNNVESGHDGWNTLPSNN 898 Query: 502 PE----------CDRAKRSDDWKSPDIPMPVTNEA 576 E + A+ D D+P PVT+EA Sbjct: 899 GESGQYDWNTLPSNNAEAGQDSFQSDLPKPVTDEA 933 >ref|XP_003517564.1| PREDICTED: probable RNA helicase SDE3-like [Glycine max] Length = 886 Score = 56.2 bits (134), Expect = 4e-06 Identities = 33/99 (33%), Positives = 48/99 (48%) Frame = +1 Query: 148 DPYWDKLLRYCSDNNSYQGCPLPERQEEIPEEDFPLSQKLYYEQDNXXXXXXXXXXXXXL 327 D +W ++L +C DN+SYQGC LPER E +ED + + +DN Sbjct: 801 DDHWSQMLWHCVDNSSYQGCSLPERVELYEDED--TGENTCFTEDNASPS---------- 848 Query: 328 NIAENPKGVRDVTEWSDDCRSTETPVPQHNQAIWSDGWK 444 N E + + EW D T+ P ++A WSDGW+ Sbjct: 849 NNVEWGQDSSNNGEWGQDSSFTK---PVTDEAEWSDGWR 884