BLASTX nr result

ID: Coptis21_contig00027494 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00027494
         (790 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274489.2| PREDICTED: LOW QUALITY PROTEIN: midasin-like...   283   4e-74
emb|CBI35900.3| unnamed protein product [Vitis vinifera]              283   4e-74
ref|XP_002521362.1| ATP binding protein, putative [Ricinus commu...   254   1e-65
ref|XP_003627214.1| Midasin [Medicago truncatula] gi|355521236|g...   216   3e-54
ref|XP_002327931.1| predicted protein [Populus trichocarpa] gi|2...   212   6e-53

>ref|XP_002274489.2| PREDICTED: LOW QUALITY PROTEIN: midasin-like [Vitis vinifera]
          Length = 5286

 Score =  283 bits (723), Expect = 4e-74
 Identities = 144/258 (55%), Positives = 182/258 (70%)
 Frame = -3

Query: 782  SENINQWKVLVGSYRANMKLDCIHKQLGETITTAVHLIDNAGKRISNVDSQIQTCLNHLH 603
            S+NI  WKVL  SY  N++LD I  +L +TI  A  L++++G +I ++  Q++T   HL+
Sbjct: 4318 SDNITSWKVLFESYVMNLQLDSICDELHKTIFYAGKLLNHSGNKIPSLCFQVETYFKHLY 4377

Query: 602  SLVNPLLTLGDGFLLEFITMHKKVAEMTHMLANVFVSLYSKGFGAATEDQIDDTGGDMSQ 423
             L++ +    DG L +F+ +HKKV+ MTH+LANVF SLYS+GFG  TEDQIDD   D S+
Sbjct: 4378 QLLDLVSGFSDGLLHDFLDVHKKVSMMTHVLANVFASLYSEGFGTPTEDQIDDNSHDTSK 4437

Query: 422  DASGTGMGEGAGVNDVSDQIENEDQLVGCSEKPSDEQDTSNEAPSKNDKGIEMDQDFAAD 243
            DA GTGMGEG G+ DVSDQI +EDQL+G SEKPS+EQD S+E PSKNDKGIEM+QDFAAD
Sbjct: 4438 DAKGTGMGEGVGLKDVSDQITDEDQLLGASEKPSEEQDVSDEVPSKNDKGIEMEQDFAAD 4497

Query: 242  ILXXXXXXXXXXXXXXXXXXXXSAMGSTGENNEVVDEKLWNKDDEGNPDTTTERYEEGPS 63
                                  SAMG TG ++E+VDEKLWNKD + N + T E+YE GPS
Sbjct: 4498 TFSVSEESGDDDNEDSGDEQLDSAMGETGADSEIVDEKLWNKDADENANNTKEKYESGPS 4557

Query: 62   VRDKDSSSRELRAKEDDA 9
            V DKD+SSRELRAKEDDA
Sbjct: 4558 VTDKDASSRELRAKEDDA 4575


>emb|CBI35900.3| unnamed protein product [Vitis vinifera]
          Length = 5267

 Score =  283 bits (723), Expect = 4e-74
 Identities = 144/258 (55%), Positives = 182/258 (70%)
 Frame = -3

Query: 782  SENINQWKVLVGSYRANMKLDCIHKQLGETITTAVHLIDNAGKRISNVDSQIQTCLNHLH 603
            S+NI  WKVL  SY  N++LD I  +L +TI  A  L++++G +I ++  Q++T   HL+
Sbjct: 4319 SDNITSWKVLFESYVMNLQLDSICDELHKTIFYAGKLLNHSGNKIPSLCFQVETYFKHLY 4378

Query: 602  SLVNPLLTLGDGFLLEFITMHKKVAEMTHMLANVFVSLYSKGFGAATEDQIDDTGGDMSQ 423
             L++ +    DG L +F+ +HKKV+ MTH+LANVF SLYS+GFG  TEDQIDD   D S+
Sbjct: 4379 QLLDLVSGFSDGLLHDFLDVHKKVSMMTHVLANVFASLYSEGFGTPTEDQIDDNSHDTSK 4438

Query: 422  DASGTGMGEGAGVNDVSDQIENEDQLVGCSEKPSDEQDTSNEAPSKNDKGIEMDQDFAAD 243
            DA GTGMGEG G+ DVSDQI +EDQL+G SEKPS+EQD S+E PSKNDKGIEM+QDFAAD
Sbjct: 4439 DAKGTGMGEGVGLKDVSDQITDEDQLLGASEKPSEEQDVSDEVPSKNDKGIEMEQDFAAD 4498

Query: 242  ILXXXXXXXXXXXXXXXXXXXXSAMGSTGENNEVVDEKLWNKDDEGNPDTTTERYEEGPS 63
                                  SAMG TG ++E+VDEKLWNKD + N + T E+YE GPS
Sbjct: 4499 TFSVSEESGDDDNEDSGDEQLDSAMGETGADSEIVDEKLWNKDADENANNTKEKYESGPS 4558

Query: 62   VRDKDSSSRELRAKEDDA 9
            V DKD+SSRELRAKEDDA
Sbjct: 4559 VTDKDASSRELRAKEDDA 4576


>ref|XP_002521362.1| ATP binding protein, putative [Ricinus communis]
            gi|223539440|gb|EEF41030.1| ATP binding protein, putative
            [Ricinus communis]
          Length = 5282

 Score =  254 bits (650), Expect = 1e-65
 Identities = 126/257 (49%), Positives = 172/257 (66%)
 Frame = -3

Query: 785  LSENINQWKVLVGSYRANMKLDCIHKQLGETITTAVHLIDNAGKRISNVDSQIQTCLNHL 606
            LSENI  W+ L  S   N+ ++ ++  L +TI  A  +I  +G   S +   +  C  HL
Sbjct: 4294 LSENITSWEFLFKSLVENLNVEGLYDNLLKTIFCAEKMISRSGSEASPLSFHLGACFEHL 4353

Query: 605  HSLVNPLLTLGDGFLLEFITMHKKVAEMTHMLANVFVSLYSKGFGAATEDQIDDTGGDMS 426
            H+L + +LT G+G L + + MHK+V+ MTH+LANV  SL+SKGFG+  +++ DD     S
Sbjct: 4354 HALSDLVLTFGEGLLQDLLAMHKRVSVMTHVLANVLASLFSKGFGSPAKEEEDDARNGKS 4413

Query: 425  QDASGTGMGEGAGVNDVSDQIENEDQLVGCSEKPSDEQDTSNEAPSKNDKGIEMDQDFAA 246
            QDA+GTGMGEG+GVNDVS+QI +EDQL+G S+KPS+EQD S +AP+KNDKGIEM+QDF A
Sbjct: 4414 QDATGTGMGEGSGVNDVSEQITDEDQLLGTSDKPSEEQDASGDAPNKNDKGIEMEQDFTA 4473

Query: 245  DILXXXXXXXXXXXXXXXXXXXXSAMGSTGENNEVVDEKLWNKDDEGNPDTTTERYEEGP 66
            D                      SAMG TG + E +DEKLW+K+++ NP+   E+YE GP
Sbjct: 4474 DTFSVSEDSDEENDEDSDDGQLESAMGETGPDGEAIDEKLWDKEEDENPNNRNEKYESGP 4533

Query: 65   SVRDKDSSSRELRAKED 15
            SV +KD+SSRELRAKE+
Sbjct: 4534 SVIEKDASSRELRAKEE 4550


>ref|XP_003627214.1| Midasin [Medicago truncatula] gi|355521236|gb|AET01690.1| Midasin
            [Medicago truncatula]
          Length = 5078

 Score =  216 bits (551), Expect = 3e-54
 Identities = 115/257 (44%), Positives = 159/257 (61%)
 Frame = -3

Query: 776  NINQWKVLVGSYRANMKLDCIHKQLGETITTAVHLIDNAGKRISNVDSQIQTCLNHLHSL 597
            N+  W++    + AN+ LD +   L +TIT    L++     IS+  S++     +LH+L
Sbjct: 4087 NLGSWEL---QFVANLSLDMLCDDLFKTITFGAKLVNCCDNNISS-SSKVGAHFQNLHTL 4142

Query: 596  VNPLLTLGDGFLLEFITMHKKVAEMTHMLANVFVSLYSKGFGAATEDQIDDTGGDMSQDA 417
            V+ LL   D  L  F  MHK VA  TH++AN+ VSL+SKGFG  TE+Q DD   D S+DA
Sbjct: 4143 VDLLLKFSDELLKNFFAMHKSVAVTTHVIANILVSLFSKGFGRLTENQEDDGTLDKSEDA 4202

Query: 416  SGTGMGEGAGVNDVSDQIENEDQLVGCSEKPSDEQDTSNEAPSKNDKGIEMDQDFAADIL 237
            SGTGMGEG G+NDVSDQI +EDQL+G  E+  +EQ+ S E P  ++ GIEMDQDF AD +
Sbjct: 4203 SGTGMGEGVGLNDVSDQITDEDQLLGTREQKKEEQEESKEVPGNDNTGIEMDQDFQADAV 4262

Query: 236  XXXXXXXXXXXXXXXXXXXXSAMGSTGENNEVVDEKLWNKDDEGNPDTTTERYEEGPSVR 57
                                S MG TG ++E V EK+W+++++  PD T E+YE GPSV+
Sbjct: 4263 SLSEDSSENEDCDGENEELESEMGPTGPDSEAVGEKIWDQNEDETPDDTGEKYESGPSVK 4322

Query: 56   DKDSSSRELRAKEDDAN 6
            D D S++ELRAK+D  +
Sbjct: 4323 DGDGSNKELRAKDDSTS 4339


>ref|XP_002327931.1| predicted protein [Populus trichocarpa] gi|222837340|gb|EEE75719.1|
            predicted protein [Populus trichocarpa]
          Length = 5317

 Score =  212 bits (540), Expect = 6e-53
 Identities = 114/207 (55%), Positives = 138/207 (66%)
 Frame = -3

Query: 629  IQTCLNHLHSLVNPLLTLGDGFLLEFITMHKKVAEMTHMLANVFVSLYSKGFGAATEDQI 450
            I TC  HLH L+  +L   DG L + + MHK V+ M+  LANV  SL+SKGFG   +D++
Sbjct: 4397 IITCA-HLHLLLELILGFCDGLLQDLLAMHKTVSIMSRELANVLASLFSKGFGIPVKDEV 4455

Query: 449  DDTGGDMSQDASGTGMGEGAGVNDVSDQIENEDQLVGCSEKPSDEQDTSNEAPSKNDKGI 270
            D+   D SQ ASGTGMGEG+G+NDVSDQI +EDQL+G SEK  DEQD S E P+KN+KGI
Sbjct: 4456 DEASHDTSQTASGTGMGEGSGLNDVSDQITDEDQLLGTSEKACDEQDASGEVPNKNEKGI 4515

Query: 269  EMDQDFAADILXXXXXXXXXXXXXXXXXXXXSAMGSTGENNEVVDEKLWNKDDEGNPDTT 90
            EM +D  AD                      SAMG  G ++EVVDEKL NKD++ NP+ T
Sbjct: 4516 EM-EDLTADTFSVSDDSGEDNEEDGEDEQLDSAMGEAGLDSEVVDEKLQNKDEDDNPNNT 4574

Query: 89   TERYEEGPSVRDKDSSSRELRAKEDDA 9
             ERYE GPSVRD D+SSRELRAKED A
Sbjct: 4575 NERYESGPSVRDNDTSSRELRAKEDSA 4601


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