BLASTX nr result

ID: Coptis21_contig00027482 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00027482
         (434 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002319994.1| predicted protein [Populus trichocarpa] gi|2...    58   9e-07
ref|XP_002333629.1| predicted protein [Populus trichocarpa] gi|2...    57   2e-06
ref|XP_002331379.1| nbs-lrr resistance protein [Populus trichoca...    55   5e-06
ref|XP_002331377.1| predicted protein [Populus trichocarpa] gi|2...    55   5e-06
ref|XP_002331373.1| cc-nbs-lrr resistance protein [Populus trich...    55   5e-06

>ref|XP_002319994.1| predicted protein [Populus trichocarpa] gi|222860767|gb|EEE98309.1|
           predicted protein [Populus trichocarpa]
          Length = 665

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 41/123 (33%), Positives = 57/123 (46%)
 Frame = +2

Query: 50  DCTGEIGESGESAQQQQMVFPRLTKLVLREMDMLEDWEIPLHKDIQIMPRLSELFIYSCR 229
           +C G   E   S+    ++FP L +L L  MD LE+W +P  +  Q+ P L EL I  C 
Sbjct: 154 NCIGN--EFYSSSGSAAVLFPALKELTLSSMDGLEEWMVPGVEGYQVFPCLEELSIRQCG 211

Query: 230 QLKALPIXXXXXXXXXXXXRGLHGVKHLSAELLGNRESRSTSSMVIFPKLTKLEIEIMPE 409
           +L+ LP               +  VK +  E      S S S+ V+FP L KL + IM  
Sbjct: 212 KLRQLPTLGCLPRLKILEMSEMGTVKCIGNEFY----SSSGSAAVLFPTLEKLTLSIMEG 267

Query: 410 WEE 418
            EE
Sbjct: 268 LEE 270


>ref|XP_002333629.1| predicted protein [Populus trichocarpa] gi|222837837|gb|EEE76202.1|
           predicted protein [Populus trichocarpa]
          Length = 634

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 36/106 (33%), Positives = 52/106 (49%)
 Frame = +2

Query: 101 MVFPRLTKLVLREMDMLEDWEIPLHKDIQIMPRLSELFIYSCRQLKALPIXXXXXXXXXX 280
           ++FP L +L L  MD LE+W IP  +  Q+ P L +L I  C +L+ LP           
Sbjct: 104 ILFPALKELTLEYMDGLEEWMIPGGEGDQVFPFLEKLSIQQCGKLRQLPTLGCLPRLKIL 163

Query: 281 XXRGLHGVKHLSAELLGNRESRSTSSMVIFPKLTKLEIEIMPEWEE 418
              G++ VK +  E      S S S  ++FP L +L +E M   EE
Sbjct: 164 KMSGINNVKCIGNEFY----SISGSPTILFPALKELTLEYMDGLEE 205


>ref|XP_002331379.1| nbs-lrr resistance protein [Populus trichocarpa]
           gi|222874417|gb|EEF11548.1| nbs-lrr resistance protein
           [Populus trichocarpa]
          Length = 821

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 45/139 (32%), Positives = 60/139 (43%)
 Frame = +2

Query: 2   VKQVGLEFLGISEDKDDCTGEIGESGESAQQQQMVFPRLTKLVLREMDMLEDWEIPLHKD 181
           VK +G EF   S         IG + E       +FP L +L LR MD LE+W +P  + 
Sbjct: 598 VKCIGKEFYSSS---------IGSAAE-------LFPALEELTLRGMDGLEEWMVPGGEG 641

Query: 182 IQIMPRLSELFIYSCRQLKALPIXXXXXXXXXXXXRGLHGVKHLSAELLGNRESRSTSSM 361
             + P L EL I  CRQL+ LP              G+  VK +  E      S   S+ 
Sbjct: 642 DLVFPCLEELCIEECRQLRQLPTLGCLPRLKILKMSGMPNVKCIGKEFY---SSSIGSAA 698

Query: 362 VIFPKLTKLEIEIMPEWEE 418
            +FP L +L +  M   EE
Sbjct: 699 ELFPALEELTLRGMDGLEE 717


>ref|XP_002331377.1| predicted protein [Populus trichocarpa] gi|222874415|gb|EEF11546.1|
           predicted protein [Populus trichocarpa]
          Length = 492

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 35/105 (33%), Positives = 51/105 (48%)
 Frame = +2

Query: 104 VFPRLTKLVLREMDMLEDWEIPLHKDIQIMPRLSELFIYSCRQLKALPIXXXXXXXXXXX 283
           +FP L +L L +MD LE+W +P  +   + P L EL I  CRQL+ LP            
Sbjct: 24  LFPALEELTLSKMDGLEEWMVPGGEGDLVFPCLEELCIEECRQLRQLPTLGCLPRLKILK 83

Query: 284 XRGLHGVKHLSAELLGNRESRSTSSMVIFPKLTKLEIEIMPEWEE 418
             G+  VK +  E      S   +++V+FP L +L +  M   EE
Sbjct: 84  MSGMRNVKCIGNEFY----SSGDNAVVLFPTLKELTLWDMDGLEE 124


>ref|XP_002331373.1| cc-nbs-lrr resistance protein [Populus trichocarpa]
           gi|222874411|gb|EEF11542.1| cc-nbs-lrr resistance
           protein [Populus trichocarpa]
          Length = 1025

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 45/139 (32%), Positives = 60/139 (43%)
 Frame = +2

Query: 2   VKQVGLEFLGISEDKDDCTGEIGESGESAQQQQMVFPRLTKLVLREMDMLEDWEIPLHKD 181
           VK +G EF   S         IG + E       +FP L +L LR MD LE+W +P  + 
Sbjct: 633 VKCIGKEFYSSS---------IGSAAE-------LFPALEELTLRGMDGLEEWMVPGGEG 676

Query: 182 IQIMPRLSELFIYSCRQLKALPIXXXXXXXXXXXXRGLHGVKHLSAELLGNRESRSTSSM 361
             + P L EL I  CRQL+ LP              G+  VK +  E      S   S+ 
Sbjct: 677 DLVFPCLEELCIEECRQLRQLPTLGCLPRLKILKMSGMPNVKCIGKEFY---SSSIGSAA 733

Query: 362 VIFPKLTKLEIEIMPEWEE 418
            +FP L +L +  M   EE
Sbjct: 734 ELFPALEELTLRGMDGLEE 752


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