BLASTX nr result

ID: Coptis21_contig00027465 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00027465
         (842 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002330602.1| predicted protein [Populus trichocarpa] gi|2...   270   4e-70
ref|XP_003633043.1| PREDICTED: 2-succinylbenzoate--CoA ligase, c...   262   6e-68
ref|XP_002263998.1| PREDICTED: 2-succinylbenzoate--CoA ligase, c...   262   6e-68
ref|XP_002528558.1| AMP dependent CoA ligase, putative [Ricinus ...   261   1e-67
ref|XP_003535086.1| PREDICTED: 2-succinylbenzoate--CoA ligase, c...   253   5e-65

>ref|XP_002330602.1| predicted protein [Populus trichocarpa] gi|222872160|gb|EEF09291.1|
           predicted protein [Populus trichocarpa]
          Length = 590

 Score =  270 bits (689), Expect = 4e-70
 Identities = 121/202 (59%), Positives = 158/202 (78%)
 Frame = -3

Query: 831 GVCVGKPAPHVELFVNGNGHCSIGRILTRGPHVMLKYWNQVPLKKLDSLHQGWLDTGDIG 652
           GVCVGKP PHVEL ++ +   +IGRILTRGPH+ML+YW+Q P+K  +S +  WLDTGDIG
Sbjct: 389 GVCVGKPPPHVELKISADEPSTIGRILTRGPHLMLRYWDQNPMKATESTNDFWLDTGDIG 448

Query: 651 WLDDKGAVWLIGRSNDRIKSGGENVYPEEVEAVLSQHPGVYSIAVVGVPDARLSEMVVAC 472
            +DD G VWL+GR N +IKSGGEN+YPEEVEA+L QHPGV +  VVGVP+ARL+EMVVAC
Sbjct: 449 SIDDCGNVWLVGRQNAQIKSGGENIYPEEVEAMLLQHPGVIATVVVGVPEARLTEMVVAC 508

Query: 471 VQLQEGWKWVGHDSQSPERMDLQLTTNILYEYCKENKMTRFKIPKIFIPWRGPFPLTSTG 292
           ++L++ W+W  ++ +     +L L   +L +YC+E K+T FK+PK+FI WR PFPLT+TG
Sbjct: 509 IKLRQSWQWTNNNCKQSAENNLTLCREVLRDYCREKKLTGFKVPKLFILWRKPFPLTTTG 568

Query: 291 KLKRDEVRREATSRLHLFPSNL 226
           K++RD+VRRE  S L  FPSNL
Sbjct: 569 KIRRDQVRREVMSHLQFFPSNL 590


>ref|XP_003633043.1| PREDICTED: 2-succinylbenzoate--CoA ligase,
           chloroplastic/peroxisomal isoform 2 [Vitis vinifera]
          Length = 545

 Score =  262 bits (670), Expect = 6e-68
 Identities = 122/203 (60%), Positives = 155/203 (76%), Gaps = 1/203 (0%)
 Frame = -3

Query: 831 GVCVGKPAPHVELFVNGNGHCSIGRILTRGPHVMLKYWNQVPLKKLDSLHQGWLDTGDIG 652
           GVCVGKPAPHVEL +  +    +GRILTRGPH+ML+YW+Q+  +  DS  +GWLDTGDIG
Sbjct: 343 GVCVGKPAPHVELKICFDSSDHVGRILTRGPHIMLRYWDQISSRPSDSPDEGWLDTGDIG 402

Query: 651 WLDDKGAVWLIGRSNDRIKSGGENVYPEEVEAVLSQHPGVYSIAVVGVPDARLSEMVVAC 472
            +DD G +WLIGR+N+RIKSGGENVYPEEVE VLSQHPGV    VVG+PD RL+EMVVAC
Sbjct: 403 SIDDYGNIWLIGRTNNRIKSGGENVYPEEVETVLSQHPGVTGSVVVGLPDVRLTEMVVAC 462

Query: 471 VQLQEGWKWVGHDSQSP-ERMDLQLTTNILYEYCKENKMTRFKIPKIFIPWRGPFPLTST 295
           +++++ W+W  +    P E+ +L L++  L  +C+E  +T FKIPK+F  WR PFPLTST
Sbjct: 463 IRIKDNWQWADNSPVHPTEKKELVLSSETLRHHCREKNLTGFKIPKLFTLWRKPFPLTST 522

Query: 294 GKLKRDEVRREATSRLHLFPSNL 226
           GKL+R +V+RE  S LH  PSNL
Sbjct: 523 GKLRRYQVQREVLSHLHSLPSNL 545


>ref|XP_002263998.1| PREDICTED: 2-succinylbenzoate--CoA ligase,
           chloroplastic/peroxisomal isoform 1 [Vitis vinifera]
           gi|297740839|emb|CBI31021.3| unnamed protein product
           [Vitis vinifera]
          Length = 565

 Score =  262 bits (670), Expect = 6e-68
 Identities = 122/203 (60%), Positives = 155/203 (76%), Gaps = 1/203 (0%)
 Frame = -3

Query: 831 GVCVGKPAPHVELFVNGNGHCSIGRILTRGPHVMLKYWNQVPLKKLDSLHQGWLDTGDIG 652
           GVCVGKPAPHVEL +  +    +GRILTRGPH+ML+YW+Q+  +  DS  +GWLDTGDIG
Sbjct: 363 GVCVGKPAPHVELKICFDSSDHVGRILTRGPHIMLRYWDQISSRPSDSPDEGWLDTGDIG 422

Query: 651 WLDDKGAVWLIGRSNDRIKSGGENVYPEEVEAVLSQHPGVYSIAVVGVPDARLSEMVVAC 472
            +DD G +WLIGR+N+RIKSGGENVYPEEVE VLSQHPGV    VVG+PD RL+EMVVAC
Sbjct: 423 SIDDYGNIWLIGRTNNRIKSGGENVYPEEVETVLSQHPGVTGSVVVGLPDVRLTEMVVAC 482

Query: 471 VQLQEGWKWVGHDSQSP-ERMDLQLTTNILYEYCKENKMTRFKIPKIFIPWRGPFPLTST 295
           +++++ W+W  +    P E+ +L L++  L  +C+E  +T FKIPK+F  WR PFPLTST
Sbjct: 483 IRIKDNWQWADNSPVHPTEKKELVLSSETLRHHCREKNLTGFKIPKLFTLWRKPFPLTST 542

Query: 294 GKLKRDEVRREATSRLHLFPSNL 226
           GKL+R +V+RE  S LH  PSNL
Sbjct: 543 GKLRRYQVQREVLSHLHSLPSNL 565


>ref|XP_002528558.1| AMP dependent CoA ligase, putative [Ricinus communis]
           gi|223532002|gb|EEF33813.1| AMP dependent CoA ligase,
           putative [Ricinus communis]
          Length = 551

 Score =  261 bits (667), Expect = 1e-67
 Identities = 118/202 (58%), Positives = 155/202 (76%)
 Frame = -3

Query: 831 GVCVGKPAPHVELFVNGNGHCSIGRILTRGPHVMLKYWNQVPLKKLDSLHQGWLDTGDIG 652
           GVCVGKPAPHVE+ +  +G    GRILTRGPH ML+YW+Q P +  D  ++ WLDTGDIG
Sbjct: 350 GVCVGKPAPHVEIKICPDGSSHSGRILTRGPHAMLRYWDQTPSEASDRTNEIWLDTGDIG 409

Query: 651 WLDDKGAVWLIGRSNDRIKSGGENVYPEEVEAVLSQHPGVYSIAVVGVPDARLSEMVVAC 472
            +D  G +WLIGR+N+RIKSGGENV+PEEVEA+L QHPGV +  V+G+PDARL EMVVAC
Sbjct: 410 IIDGSGNLWLIGRANNRIKSGGENVHPEEVEAILLQHPGVAAAIVLGIPDARLMEMVVAC 469

Query: 471 VQLQEGWKWVGHDSQSPERMDLQLTTNILYEYCKENKMTRFKIPKIFIPWRGPFPLTSTG 292
           ++L+EGW+W   D +     ++ L + IL +YC+E  ++RFK+PKIFI WR PFPLT++G
Sbjct: 470 IRLREGWRWSNDDCKPLAGKEILLCSEILQKYCREKNLSRFKVPKIFIIWRKPFPLTTSG 529

Query: 291 KLKRDEVRREATSRLHLFPSNL 226
           K++RD++R E TS L   PS+L
Sbjct: 530 KIRRDQIRGEVTSHLQFLPSSL 551


>ref|XP_003535086.1| PREDICTED: 2-succinylbenzoate--CoA ligase,
           chloroplastic/peroxisomal-like [Glycine max]
          Length = 560

 Score =  253 bits (645), Expect = 5e-65
 Identities = 118/204 (57%), Positives = 152/204 (74%)
 Frame = -3

Query: 837 QLGVCVGKPAPHVELFVNGNGHCSIGRILTRGPHVMLKYWNQVPLKKLDSLHQGWLDTGD 658
           Q GVCVGK APH+EL ++ +    IGRILTRGPH+ML+YW+Q     L+  ++ WLDTGD
Sbjct: 359 QQGVCVGKAAPHIELKISADASGHIGRILTRGPHIMLRYWDQTLTNPLNPNNEAWLDTGD 418

Query: 657 IGWLDDKGAVWLIGRSNDRIKSGGENVYPEEVEAVLSQHPGVYSIAVVGVPDARLSEMVV 478
           IG +D  G +WL+GR+N RIKSGGEN+YPEEVEA+L QHPG+ S+ VVG+PDA L+EMV 
Sbjct: 419 IGSIDHYGNLWLLGRTNGRIKSGGENIYPEEVEAILQQHPGIASVVVVGIPDAHLTEMVA 478

Query: 477 ACVQLQEGWKWVGHDSQSPERMDLQLTTNILYEYCKENKMTRFKIPKIFIPWRGPFPLTS 298
           AC+QL+E W+W    S S E  +  L+   LY+YC EN ++RFKIPK FI WR PF LT+
Sbjct: 479 ACIQLRENWQWSEQLSASNE--EFLLSRKNLYQYCLENHLSRFKIPKTFIVWRKPFQLTT 536

Query: 297 TGKLKRDEVRREATSRLHLFPSNL 226
           TGK++RD+VR+E  S+L    SNL
Sbjct: 537 TGKIRRDQVRKEVMSQLQSLHSNL 560


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