BLASTX nr result

ID: Coptis21_contig00027447 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00027447
         (491 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK21756.1| unknown [Picea sitchensis] gi|116781549|gb|ABK221...    60   5e-11
ref|NP_001239974.1| uncharacterized protein LOC100820541 [Glycin...    60   9e-11
ref|XP_003536585.1| PREDICTED: mitotic checkpoint protein BUB3-l...    60   9e-11
ref|XP_003610622.1| Mitotic checkpoint protein BUB3 [Medicago tr...    59   1e-10
ref|NP_566644.1| cell cycle arrest protein BUB3 [Arabidopsis tha...    58   2e-10

>gb|ABK21756.1| unknown [Picea sitchensis] gi|116781549|gb|ABK22148.1| unknown
           [Picea sitchensis]
          Length = 342

 Score = 60.5 bits (145), Expect(2) = 5e-11
 Identities = 38/59 (64%), Positives = 41/59 (69%), Gaps = 8/59 (13%)
 Frame = -1

Query: 491 PRGASG--KALT*NQS----VYILSLVGHRLVVATAGRNVNVYDFGNMSQ--QRKGGSL 339
           PRGASG  K L    S    VY +SLVGHRLVVATAGRN+NVYD  NMSQ  QR+  SL
Sbjct: 130 PRGASGHEKTLVGTYSQPERVYSMSLVGHRLVVATAGRNINVYDLRNMSQPEQRRESSL 188



 Score = 31.6 bits (70), Expect(2) = 5e-11
 Identities = 15/21 (71%), Positives = 15/21 (71%)
 Frame = -3

Query: 246 SSLKYQTICVRRYPNETSAIL 184
           SSLKYQT CVR YPN T   L
Sbjct: 186 SSLKYQTRCVRCYPNGTGFAL 206


>ref|NP_001239974.1| uncharacterized protein LOC100820541 [Glycine max]
           gi|255645545|gb|ACU23267.1| unknown [Glycine max]
          Length = 344

 Score = 59.7 bits (143), Expect(2) = 9e-11
 Identities = 36/59 (61%), Positives = 41/59 (69%), Gaps = 8/59 (13%)
 Frame = -1

Query: 491 PRGASGKALT*------NQSVYILSLVGHRLVVATAGRNVNVYDFGNMSQ--QRKGGSL 339
           PRGASG+  T        + VY LSLVGHRLVVATAGR+VN+YD  NMSQ  QR+  SL
Sbjct: 127 PRGASGQERTLVGTYPQPERVYSLSLVGHRLVVATAGRHVNIYDLRNMSQPEQRRESSL 185



 Score = 31.6 bits (70), Expect(2) = 9e-11
 Identities = 15/21 (71%), Positives = 15/21 (71%)
 Frame = -3

Query: 246 SSLKYQTICVRRYPNETSAIL 184
           SSLKYQT CVR YPN T   L
Sbjct: 183 SSLKYQTRCVRCYPNGTGYAL 203


>ref|XP_003536585.1| PREDICTED: mitotic checkpoint protein BUB3-like [Glycine max]
          Length = 340

 Score = 59.7 bits (143), Expect(2) = 9e-11
 Identities = 36/59 (61%), Positives = 41/59 (69%), Gaps = 8/59 (13%)
 Frame = -1

Query: 491 PRGASGKALT*------NQSVYILSLVGHRLVVATAGRNVNVYDFGNMSQ--QRKGGSL 339
           PRGASG+  T        + VY LSLVGHRLVVATAGR+VN+YD  NMSQ  QR+  SL
Sbjct: 127 PRGASGQERTLVGTYPQPERVYSLSLVGHRLVVATAGRHVNIYDLRNMSQPEQRRESSL 185



 Score = 31.6 bits (70), Expect(2) = 9e-11
 Identities = 15/21 (71%), Positives = 15/21 (71%)
 Frame = -3

Query: 246 SSLKYQTICVRRYPNETSAIL 184
           SSLKYQT CVR YPN T   L
Sbjct: 183 SSLKYQTRCVRCYPNGTGYAL 203


>ref|XP_003610622.1| Mitotic checkpoint protein BUB3 [Medicago truncatula]
           gi|355511957|gb|AES93580.1| Mitotic checkpoint protein
           BUB3 [Medicago truncatula]
          Length = 344

 Score = 58.9 bits (141), Expect(2) = 1e-10
 Identities = 36/59 (61%), Positives = 41/59 (69%), Gaps = 8/59 (13%)
 Frame = -1

Query: 491 PRGASGKALT*------NQSVYILSLVGHRLVVATAGRNVNVYDFGNMS--QQRKGGSL 339
           PRGASG+  T        + VY LSLVGHRLVVATAGR+VNVYD  NMS  +QR+  SL
Sbjct: 131 PRGASGQERTLVGTYAQPERVYSLSLVGHRLVVATAGRHVNVYDMRNMSCPEQRRESSL 189



 Score = 31.6 bits (70), Expect(2) = 1e-10
 Identities = 15/21 (71%), Positives = 15/21 (71%)
 Frame = -3

Query: 246 SSLKYQTICVRRYPNETSAIL 184
           SSLKYQT CVR YPN T   L
Sbjct: 187 SSLKYQTRCVRCYPNGTGYAL 207


>ref|NP_566644.1| cell cycle arrest protein BUB3 [Arabidopsis thaliana]
           gi|9294423|dbj|BAB02543.1| mitotic checkpoint protein
           [Arabidopsis thaliana] gi|21593004|gb|AAM64953.1|
           mitotic checkpoint protein, putative [Arabidopsis
           thaliana] gi|28393726|gb|AAO42274.1| putative mitotic
           checkpoint protein [Arabidopsis thaliana]
           gi|29824353|gb|AAP04137.1| putative mitotic checkpoint
           protein [Arabidopsis thaliana]
           gi|332642742|gb|AEE76263.1| cell cycle arrest protein
           BUB3 [Arabidopsis thaliana]
          Length = 340

 Score = 58.2 bits (139), Expect(2) = 2e-10
 Identities = 35/59 (59%), Positives = 40/59 (67%), Gaps = 8/59 (13%)
 Frame = -1

Query: 491 PRGASGKALT*------NQSVYILSLVGHRLVVATAGRNVNVYDFGNMSQ--QRKGGSL 339
           PRGASG   T        + VY +SLVGHRLVVATAGR+VN+YD  NMSQ  QR+  SL
Sbjct: 127 PRGASGPERTQVGTYLQPERVYSMSLVGHRLVVATAGRHVNIYDLRNMSQPEQRRESSL 185



 Score = 31.6 bits (70), Expect(2) = 2e-10
 Identities = 15/21 (71%), Positives = 15/21 (71%)
 Frame = -3

Query: 246 SSLKYQTICVRRYPNETSAIL 184
           SSLKYQT CVR YPN T   L
Sbjct: 183 SSLKYQTRCVRCYPNGTGYAL 203


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