BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00027444
         (516 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002326535.1| predicted protein [Populus trichocarpa] gi|2...    89   4e-16
ref|XP_002277376.1| PREDICTED: uncharacterized protein LOC100262...    86   4e-15
emb|CBI33855.3| unnamed protein product [Vitis vinifera]               86   4e-15
ref|XP_003612847.1| E3 ubiquitin-protein ligase RNF14 [Medicago ...    76   2e-12
ref|XP_004136196.1| PREDICTED: E3 ubiquitin-protein ligase RNF14...    75   6e-12

>ref|XP_002326535.1| predicted protein [Populus trichocarpa] gi|222833857|gb|EEE72334.1|
           predicted protein [Populus trichocarpa]
          Length = 642

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 61/144 (42%), Positives = 78/144 (54%), Gaps = 4/144 (2%)
 Frame = -2

Query: 422 ENSKLCLQVTSSSTTTPKEELVQEDE---VNNDVSRXXXXXXXXXXXXLSVEQLTINNHL 252
           EN +  L  T       K+E  + D    V+  V+R            LS EQL IN+ L
Sbjct: 90  ENMEKHLHETKKEEIEEKKEESEPDNGNGVDGVVTRLEEFFLGVEEPELSEEQLRINDQL 149

Query: 251 QEDELLAMEAIYGDNLTICRSKAGQKSFQICIHIETLDELTISAKLHSF-NANVKSGGKL 75
           QEDELLAME+IYGDN  I   + G +SFQI IHIE   E T++AKL+S  + N KSG   
Sbjct: 150 QEDELLAMESIYGDNTFILERQRGLRSFQIHIHIEVPAEFTVTAKLYSLGDCNGKSGSS- 208

Query: 74  TSPIAPAQPVNEFLYTFKVQHLPP 3
                     +EF Y+F+VQ+LPP
Sbjct: 209 ----------DEFSYSFEVQYLPP 222


>ref|XP_002277376.1| PREDICTED: uncharacterized protein LOC100262589 [Vitis vinifera]
          Length = 868

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 55/130 (42%), Positives = 76/130 (58%), Gaps = 4/130 (3%)
 Frame = -2

Query: 380 TTPKEELVQEDEVNNDV----SRXXXXXXXXXXXXLSVEQLTINNHLQEDELLAMEAIYG 213
           T   EE+V+  +  +DV    SR            LS ++L IN  LQEDELLAM++IYG
Sbjct: 321 TDLNEEVVEASDFTHDVDDVGSRLEKLVVGVEEPELSEDRLRINAQLQEDELLAMQSIYG 380

Query: 212 DNLTICRSKAGQKSFQICIHIETLDELTISAKLHSFNANVKSGGKLTSPIAPAQPVNEFL 33
           DN+ I   + G +SFQI +HIE L ELT++AKL+S      S G+ T     +   ++F 
Sbjct: 381 DNVFILDRQQGLQSFQIHVHIEALGELTVTAKLNS------SSGRTTE----SDGSDDFS 430

Query: 32  YTFKVQHLPP 3
           Y+F VQ+LPP
Sbjct: 431 YSFNVQYLPP 440


>emb|CBI33855.3| unnamed protein product [Vitis vinifera]
          Length = 662

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 55/130 (42%), Positives = 76/130 (58%), Gaps = 4/130 (3%)
 Frame = -2

Query: 380 TTPKEELVQEDEVNNDV----SRXXXXXXXXXXXXLSVEQLTINNHLQEDELLAMEAIYG 213
           T   EE+V+  +  +DV    SR            LS ++L IN  LQEDELLAM++IYG
Sbjct: 115 TDLNEEVVEASDFTHDVDDVGSRLEKLVVGVEEPELSEDRLRINAQLQEDELLAMQSIYG 174

Query: 212 DNLTICRSKAGQKSFQICIHIETLDELTISAKLHSFNANVKSGGKLTSPIAPAQPVNEFL 33
           DN+ I   + G +SFQI +HIE L ELT++AKL+S      S G+ T     +   ++F 
Sbjct: 175 DNVFILDRQQGLQSFQIHVHIEALGELTVTAKLNS------SSGRTTE----SDGSDDFS 224

Query: 32  YTFKVQHLPP 3
           Y+F VQ+LPP
Sbjct: 225 YSFNVQYLPP 234


>ref|XP_003612847.1| E3 ubiquitin-protein ligase RNF14 [Medicago truncatula]
           gi|355514182|gb|AES95805.1| E3 ubiquitin-protein ligase
           RNF14 [Medicago truncatula]
          Length = 630

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 54/146 (36%), Positives = 77/146 (52%), Gaps = 7/146 (4%)
 Frame = -2

Query: 419 NSKLCLQVTSSSTTTPKEELVQEDEVNNDV-------SRXXXXXXXXXXXXLSVEQLTIN 261
           N+     V SSS T  KEE    D  NND+       +R            LS E++TIN
Sbjct: 70  NNNTVDDVASSSKTKTKEEY---DYDNNDIDNGMDNTNRLDKLLTDIQQIELSEEEITIN 126

Query: 260 NHLQEDELLAMEAIYGDNLTICRSKAGQKSFQICIHIETLDELTISAKLHSFNANVKSGG 81
           + LQ+DELL +E+IYG+N+    +  G + FQI I+I+ L E+ I+AK++S N       
Sbjct: 127 DQLQQDELLVVESIYGENVFSLDTWKGLRCFQIHINIDVLGEIGITAKVNSVNELETLSN 186

Query: 80  KLTSPIAPAQPVNEFLYTFKVQHLPP 3
                       ++FLY+FKVQ+LPP
Sbjct: 187 N----------SDDFLYSFKVQYLPP 202


>ref|XP_004136196.1| PREDICTED: E3 ubiquitin-protein ligase RNF14-like [Cucumis sativus]
           gi|449525814|ref|XP_004169911.1| PREDICTED: E3
           ubiquitin-protein ligase RNF14-like [Cucumis sativus]
          Length = 638

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 45/94 (47%), Positives = 62/94 (65%)
 Frame = -2

Query: 284 SVEQLTINNHLQEDELLAMEAIYGDNLTICRSKAGQKSFQICIHIETLDELTISAKLHSF 105
           S EQL+INN LQEDELLA+E+IYG+N+ I     GQ+ FQI IHIE   ++TI+AKL+S 
Sbjct: 131 SEEQLSINNQLQEDELLALESIYGENVYILDEYKGQRRFQIFIHIENPGDITITAKLNS- 189

Query: 104 NANVKSGGKLTSPIAPAQPVNEFLYTFKVQHLPP 3
                S  ++ SP +     +EF  +F V++L P
Sbjct: 190 ----SSSLEIKSPNS-----DEFSCSFDVKYLNP 214