BLASTX nr result

ID: Coptis21_contig00027442 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00027442
         (1192 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282324.1| PREDICTED: uncharacterized protein LOC100248...   201   4e-49
ref|XP_002525443.1| transcription factor, putative [Ricinus comm...   195   2e-47
ref|XP_002319702.1| predicted protein [Populus trichocarpa] gi|2...   189   2e-45
ref|XP_002325408.1| predicted protein [Populus trichocarpa] gi|2...   188   2e-45
ref|XP_002282336.1| PREDICTED: uncharacterized protein LOC100248...   186   1e-44

>ref|XP_002282324.1| PREDICTED: uncharacterized protein LOC100248614 isoform 1 [Vitis
            vinifera]
          Length = 418

 Score =  201 bits (510), Expect = 4e-49
 Identities = 143/308 (46%), Positives = 180/308 (58%), Gaps = 44/308 (14%)
 Frame = -2

Query: 891  GDRMCDASGALMT----GSQTNKSLEISESLEMQIEVQRRLNEHLEVQRQLQLRIEAQ*K 724
            G+RM +A+GALM+    G+QTNKSL +SE+L+M IE QRRL+E LEVQR LQLRIEAQ K
Sbjct: 118  GERMPEANGALMSSPNIGNQTNKSLHLSETLQM-IEAQRRLHEQLEVQRHLQLRIEAQGK 176

Query: 723  YLQSVLKKAQETLGKQKLGVCARL*DAKVHISQLVSKLSNECLDSG-------------- 586
            YLQ+VL+KAQETLG+Q LG    L  AKV +S+LVSK+S +CL S               
Sbjct: 177  YLQAVLEKAQETLGRQNLGAVG-LEAAKVQLSELVSKVSTQCLHSAFSELKELQSLCPQQ 235

Query: 585  ----PPDGSMDSCLTSSCEGSQKDQEI-PC-IRLTPYHHHTDNINDKVTMGSREEPQCET 424
                P D SMDSCLT SCEGSQ++QEI  C + L PY + +  +  K T    E P  + 
Sbjct: 236  TQTQPTDCSMDSCLT-SCEGSQREQEIHNCGMGLRPYTNGSTPLEAKDT---AEPPGLQH 291

Query: 423  NEPQWCRNRNENNLFPSCSIGKDTERMMFPAQINSSDFSMRIASQQGVKGSSSSISDMRP 244
               +WC +  EN  F S S+ +D ER    A+ ++SD SMRI  Q      S+S S+ R 
Sbjct: 292  TVLKWCEDTKENRQFIS-SMQRDAERRTMTAERSNSDLSMRIGLQGEKGNGSNSYSEGRF 350

Query: 243  KETA-----------GSQLG------NEKKLKVFALPYLNSKLDLNVHDEND---AASQL 124
            K  A           G+  G      NEK    + LP   +KLDLN HDEND   +  Q 
Sbjct: 351  KGRAEADNFVDRTNHGADSGNSVKQENEKMSHGYRLPCFGAKLDLNAHDENDVTLSCKQF 410

Query: 123  DLNGFSWS 100
            DLNGFSW+
Sbjct: 411  DLNGFSWN 418


>ref|XP_002525443.1| transcription factor, putative [Ricinus communis]
            gi|223535256|gb|EEF36933.1| transcription factor,
            putative [Ricinus communis]
          Length = 419

 Score =  195 bits (496), Expect = 2e-47
 Identities = 140/311 (45%), Positives = 180/311 (57%), Gaps = 42/311 (13%)
 Frame = -2

Query: 906  TGAEAGDRMCDAS----GALMTGSQTNKSLEISESLEMQIEVQRRLNEHLEVQRQLQLRI 739
            TGA  GDR+ + +      L  G+QTNK L I E+L+MQIEVQRRL+E LEVQR LQLRI
Sbjct: 117  TGAVVGDRISETNVTHINNLSMGTQTNKGLHIGEALQMQIEVQRRLHEQLEVQRHLQLRI 176

Query: 738  EAQ*KYLQSVLKKAQETLGKQKLGVCARL*DAKVHISQLVSKLSNECLDSG--------- 586
            EAQ KYLQSVL+KAQETLG+Q LG    L  AKV +S+LVSK+S +CL+S          
Sbjct: 177  EAQGKYLQSVLEKAQETLGRQNLGSIG-LEAAKVQLSELVSKVSTQCLNSAFSELKELQG 235

Query: 585  ----------PPDGSMDSCLTSSCEGSQKDQEI--PCIRLTPYHHHTDNINDKVTMGSRE 442
                      P D SMDSCLT SCEGSQK+QEI    + L PY+ +    +  +T G   
Sbjct: 236  LCHQQTQTAPPTDCSMDSCLT-SCEGSQKEQEIHNTGMGLRPYNGNALLESKDITEGH-- 292

Query: 441  EPQCETNEPQWCRNRNENNLFPSCSIGKDTERMMFPAQINSSDFSMRIASQQGVKGSSSS 262
                   E +W  +  +N +F S  +G +  R  F A+ ++SD SM +   QG  G++SS
Sbjct: 293  --VLHQTELKWSEDLKDNKMFLS-PLGNNAARRNFAAERSTSDLSMTV-GLQGENGNASS 348

Query: 261  ISDMR----------PKETAGS----QLGNEKKLKVFALPYLNSKLDLNVHDENDAAS-- 130
             S+ R          P +T  S    +L      + + LPY  +KLDLN H+E DAAS  
Sbjct: 349  FSEGRYKDRNDGDSFPDQTNKSLDSVKLPKGDVSQGYRLPYFATKLDLNSHEEIDAASSC 408

Query: 129  -QLDLNGFSWS 100
             QLDLNGFSW+
Sbjct: 409  KQLDLNGFSWN 419


>ref|XP_002319702.1| predicted protein [Populus trichocarpa] gi|222858078|gb|EEE95625.1|
            predicted protein [Populus trichocarpa]
          Length = 427

 Score =  189 bits (479), Expect = 2e-45
 Identities = 147/337 (43%), Positives = 184/337 (54%), Gaps = 48/337 (14%)
 Frame = -2

Query: 966  GQRNICSSWTRIIGWTVTGFTGAEAGDRMCDASGA------LMTGSQTNK-----SLEIS 820
            GQ NI SS    IG      T A  GDRM +A+        L  GSQ NK     SL  S
Sbjct: 106  GQANIGSSK---IG------TVAVVGDRMPEANATHININNLSIGSQPNKILKSRSLHFS 156

Query: 819  ESLEMQIEVQRRLNEHLEVQRQLQLRIEAQ*KYLQSVLKKAQETLGKQKLGVCARL*DAK 640
            E+L+MQIEVQRRL+E LEVQR LQLRIEAQ KYLQ+VL+KAQETLG+Q LG    L  AK
Sbjct: 157  EALQMQIEVQRRLHEQLEVQRHLQLRIEAQGKYLQAVLEKAQETLGRQNLGTVG-LEAAK 215

Query: 639  VHISQLVSKLSNECLDS-------------------GPPDGSMDSCLTSSCEGSQKDQEI 517
            V +S+LVSK+S +CL+S                    P D SMDSCLT SCEGSQK+QEI
Sbjct: 216  VQLSELVSKVSTQCLNSTFSELNDLQGLCPQQTPPTQPNDCSMDSCLT-SCEGSQKEQEI 274

Query: 516  PCIRLTPYHHHTDNINDKVTMGSREEPQCETNEPQWCRNRNENNLFPSCSIGKDTERMMF 337
              I +     +++ + +   +   EE   +  E +W     +N +F + SIG +TER  F
Sbjct: 275  HNIGMGLRPCNSNALLEPKEIA--EEHALQQTELKWGEYLRDNKMFLT-SIGHETERRTF 331

Query: 336  PAQINSSDFSMRIASQQGVKGS---------------SSSISDMRPKETAGSQLGNEKKL 202
             A+ + SD S+ +   QG KG+                 S  D   K     +  +EK  
Sbjct: 332  SAERSCSDLSIGV-GLQGEKGNINSSFAEGRFKGMSEDDSFQDQTNKRAESVKYEDEKMS 390

Query: 201  KVFALPYLNSKLDLNVHDENDAAS---QLDLNGFSWS 100
              + L Y  +KLDLN HDE DAAS   QLDLNGFSW+
Sbjct: 391  PGYRLSYFTTKLDLNSHDEIDAASSCKQLDLNGFSWN 427


>ref|XP_002325408.1| predicted protein [Populus trichocarpa] gi|222862283|gb|EEE99789.1|
            predicted protein [Populus trichocarpa]
          Length = 421

 Score =  188 bits (478), Expect = 2e-45
 Identities = 141/312 (45%), Positives = 177/312 (56%), Gaps = 43/312 (13%)
 Frame = -2

Query: 906  TGAEAGDRMCDASGA----LMTGSQTNKSLEISESLEMQIEVQRRLNEHLEVQRQLQLRI 739
            T A  GDRM + +      L  GSQTNKSL  SE+L++QIEVQRRL+E LEVQR LQLRI
Sbjct: 117  TVAVVGDRMPEVNATHINNLSIGSQTNKSLHFSEALQVQIEVQRRLHEQLEVQRHLQLRI 176

Query: 738  EAQ*KYLQSVLKKAQETLGKQKLGVCARL*DAKVHISQLVSKLSNECLDSG--------- 586
            EAQ KYLQSVL+KAQETLG+Q LG    L  AKV +S+LVSK+S++CL+S          
Sbjct: 177  EAQGKYLQSVLEKAQETLGRQNLGTVG-LEAAKVQLSELVSKVSSKCLNSAFSELKDLQG 235

Query: 585  ----------PPDGSMDSCLTSSCEGSQKDQEI--PCIRLTPYHHHTDNINDKVTMGSRE 442
                      P D SMDSCLT S EGSQK+QEI    + L PY+ +   +  KV  G   
Sbjct: 236  LCPPLTQPTHPNDCSMDSCLT-SIEGSQKEQEIHNTGMGLRPYNGNA-LLEPKVIAGEHA 293

Query: 441  EPQCETNEPQWCRNRNENNLFPSCSIGKDTERMMFPAQINSSDFSMRIASQQGVKGSSS- 265
              Q E   P    ++ +N +F S S+  DTER  F A+ + S+ S+ +   QG +G+ S 
Sbjct: 294  LQQTELKWPG--EDQRDNKMFLS-SMRNDTERRTFSAERSCSNLSIGV-GLQGERGNVSS 349

Query: 264  --------------SISDMRPKETAGSQLGNEKKLKVFALPYLNSKLDLNVHDENDAAS- 130
                          S  D   +     +L NEK    + L Y  +KLDLN H E DAAS 
Sbjct: 350  SFAEARFKGRSEDDSFQDKTNRRIDAIKLENEKLSPGYRLSYYATKLDLNSHGEIDAASG 409

Query: 129  --QLDLNGFSWS 100
              QLDLNGFSW+
Sbjct: 410  CRQLDLNGFSWN 421


>ref|XP_002282336.1| PREDICTED: uncharacterized protein LOC100248614 isoform 2 [Vitis
            vinifera]
          Length = 412

 Score =  186 bits (472), Expect = 1e-44
 Identities = 138/308 (44%), Positives = 176/308 (57%), Gaps = 44/308 (14%)
 Frame = -2

Query: 891  GDRMCDASGALMT----GSQTNKSLEISESLEMQIEVQRRLNEHLEVQRQLQLRIEAQ*K 724
            G+RM +A+GALM+    G+QTNKSL +SE+L+M IE QRRL+E      QL+LRIEAQ K
Sbjct: 118  GERMPEANGALMSSPNIGNQTNKSLHLSETLQM-IEAQRRLHE------QLELRIEAQGK 170

Query: 723  YLQSVLKKAQETLGKQKLGVCARL*DAKVHISQLVSKLSNECLDSG-------------- 586
            YLQ+VL+KAQETLG+Q LG    L  AKV +S+LVSK+S +CL S               
Sbjct: 171  YLQAVLEKAQETLGRQNLGAVG-LEAAKVQLSELVSKVSTQCLHSAFSELKELQSLCPQQ 229

Query: 585  ----PPDGSMDSCLTSSCEGSQKDQEI-PC-IRLTPYHHHTDNINDKVTMGSREEPQCET 424
                P D SMDSCLT SCEGSQ++QEI  C + L PY + +  +  K T    E P  + 
Sbjct: 230  TQTQPTDCSMDSCLT-SCEGSQREQEIHNCGMGLRPYTNGSTPLEAKDT---AEPPGLQH 285

Query: 423  NEPQWCRNRNENNLFPSCSIGKDTERMMFPAQINSSDFSMRIASQQGVKGSSSSISDMRP 244
               +WC +  EN  F S S+ +D ER    A+ ++SD SMRI  Q      S+S S+ R 
Sbjct: 286  TVLKWCEDTKENRQFIS-SMQRDAERRTMTAERSNSDLSMRIGLQGEKGNGSNSYSEGRF 344

Query: 243  KETA-----------GSQLG------NEKKLKVFALPYLNSKLDLNVHDEND---AASQL 124
            K  A           G+  G      NEK    + LP   +KLDLN HDEND   +  Q 
Sbjct: 345  KGRAEADNFVDRTNHGADSGNSVKQENEKMSHGYRLPCFGAKLDLNAHDENDVTLSCKQF 404

Query: 123  DLNGFSWS 100
            DLNGFSW+
Sbjct: 405  DLNGFSWN 412


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