BLASTX nr result

ID: Coptis21_contig00027430 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00027430
         (476 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003622560.1| hypothetical protein MTR_7g045430 [Medicago ...    40   6e-07
emb|CAN68148.1| hypothetical protein VITISV_035665 [Vitis vinifera]    40   1e-06
emb|CAN60374.1| hypothetical protein VITISV_001215 [Vitis vinifera]    42   5e-06
emb|CAN67322.1| hypothetical protein VITISV_004158 [Vitis vinifera]    42   5e-06
gb|ABF81417.1| TIR-NBS-LRR type disease resistance protein [Popu...    41   6e-06

>ref|XP_003622560.1| hypothetical protein MTR_7g045430 [Medicago truncatula]
           gi|355497575|gb|AES78778.1| hypothetical protein
           MTR_7g045430 [Medicago truncatula]
          Length = 483

 Score = 40.4 bits (93), Expect(2) = 6e-07
 Identities = 17/28 (60%), Positives = 23/28 (82%)
 Frame = -3

Query: 204 FKPIRSQILLIEPFPSLAKIYSLVRQEE 121
           F  +R+Q+LL++P PSL K+YSLV QEE
Sbjct: 159 FSVVRTQVLLVDPLPSLNKVYSLVVQEE 186



 Score = 37.7 bits (86), Expect(2) = 6e-07
 Identities = 28/77 (36%), Positives = 45/77 (58%), Gaps = 6/77 (7%)
 Frame = -1

Query: 404 FPKTSVSM*PRLKQESTTVHAYFTSLKSLWDELDS---LSN-VCLYLWLRLSSMEKKI-- 243
           F  TS+ +   LKQ  + +  YFT +KSLW+EL S   +SN  C++     +S   KI  
Sbjct: 84  FCDTSLEVWLDLKQSFSKIDHYFTKMKSLWEELSSHRPISNCACVHPCRCAASKVAKIHK 143

Query: 242 QDDRAMKFMQDHVSNQF 192
            +D+ M+F+ D +++QF
Sbjct: 144 NEDQIMQFLID-LNDQF 159


>emb|CAN68148.1| hypothetical protein VITISV_035665 [Vitis vinifera]
          Length = 1813

 Score = 40.0 bits (92), Expect(2) = 1e-06
 Identities = 17/45 (37%), Positives = 28/45 (62%)
 Frame = -3

Query: 204 FKPIRSQILLIEPFPSLAKIYSLVRQEEKQQKIHDFPPPTLEAAA 70
           +K +RS IL++ P P++ + YSL+ QEE Q+++   P      AA
Sbjct: 478 YKAVRSNILMMSPLPNVRQAYSLIVQEEMQRQVSSEPTENFSIAA 522



 Score = 37.0 bits (84), Expect(2) = 1e-06
 Identities = 20/52 (38%), Positives = 35/52 (67%)
 Frame = -1

Query: 371 LKQESTTVHAYFTSLKSLWDELDSLSNVCLYLWLRLSSMEKKIQDDRAMKFM 216
           + Q + TV AYFT +K+LWDEL++  +  L    R + +E++ ++DR M+F+
Sbjct: 422 MSQGTMTVAAYFTKIKALWDELETYRSP-LTCNQRQAHLEQR-EEDRLMQFL 471


>emb|CAN60374.1| hypothetical protein VITISV_001215 [Vitis vinifera]
          Length = 1535

 Score = 41.6 bits (96), Expect(2) = 5e-06
 Identities = 26/62 (41%), Positives = 32/62 (51%), Gaps = 5/62 (8%)
 Frame = -3

Query: 204 FKPIRSQILLIEPFPSLAKIYSLVRQEEKQQKI---HDFPPPTLEA--AALSNQFSNNKT 40
           +  IR QILL+ P PS+ + YS V QEEKQ+ +   H        A  A  SNQ  NN  
Sbjct: 210 YSAIRGQILLMNPLPSIRQAYSSVCQEEKQRLLSATHTTAESNSSAAMAVRSNQMKNNSA 269

Query: 39  NN 34
            N
Sbjct: 270 GN 271



 Score = 33.5 bits (75), Expect(2) = 5e-06
 Identities = 13/26 (50%), Positives = 19/26 (73%)
 Frame = -1

Query: 368 KQESTTVHAYFTSLKSLWDELDSLSN 291
           +QE  ++  Y+T LKSLWDEL S ++
Sbjct: 162 RQEQLSISVYYTKLKSLWDELASYND 187


>emb|CAN67322.1| hypothetical protein VITISV_004158 [Vitis vinifera]
          Length = 1171

 Score = 41.6 bits (96), Expect(2) = 5e-06
 Identities = 25/62 (40%), Positives = 32/62 (51%), Gaps = 5/62 (8%)
 Frame = -3

Query: 204 FKPIRSQILLIEPFPSLAKIYSLVRQEEKQQKIHDF-----PPPTLEAAALSNQFSNNKT 40
           +  IR QILL+ P PS+ + YS V QEEKQ+ +           +L  A  SNQ  NN  
Sbjct: 191 YSAIRGQILLMNPLPSVRQAYSSVCQEEKQRLLSATHTAAESNSSLAMAVRSNQMKNNSV 250

Query: 39  NN 34
            N
Sbjct: 251 GN 252



 Score = 33.5 bits (75), Expect(2) = 5e-06
 Identities = 13/26 (50%), Positives = 19/26 (73%)
 Frame = -1

Query: 368 KQESTTVHAYFTSLKSLWDELDSLSN 291
           +QE  ++  Y+T LKSLWDEL S ++
Sbjct: 143 RQEQLSISVYYTKLKSLWDELASYND 168


>gb|ABF81417.1| TIR-NBS-LRR type disease resistance protein [Populus trichocarpa]
          Length = 1867

 Score = 41.2 bits (95), Expect(2) = 6e-06
 Identities = 22/49 (44%), Positives = 31/49 (63%)
 Frame = -3

Query: 204 FKPIRSQILLIEPFPSLAKIYSLVRQEEKQQKIHDFPPPTLEAAALSNQ 58
           +K IR QILL+ P P + + YS + QEEKQ+ + D    T E AA++ Q
Sbjct: 132 YKAIRGQILLMNPLPDVRQAYSSIVQEEKQRSLCDI-HETTETAAMAVQ 179



 Score = 33.5 bits (75), Expect(2) = 6e-06
 Identities = 16/29 (55%), Positives = 18/29 (62%)
 Frame = -1

Query: 386 SM*PRLKQESTTVHAYFTSLKSLWDELDS 300
           S+ P L     TV AY+T LK LWDEL S
Sbjct: 76  SITPDLADTQMTVAAYYTKLKGLWDELGS 104


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