BLASTX nr result
ID: Coptis21_contig00027430
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00027430 (476 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003622560.1| hypothetical protein MTR_7g045430 [Medicago ... 40 6e-07 emb|CAN68148.1| hypothetical protein VITISV_035665 [Vitis vinifera] 40 1e-06 emb|CAN60374.1| hypothetical protein VITISV_001215 [Vitis vinifera] 42 5e-06 emb|CAN67322.1| hypothetical protein VITISV_004158 [Vitis vinifera] 42 5e-06 gb|ABF81417.1| TIR-NBS-LRR type disease resistance protein [Popu... 41 6e-06 >ref|XP_003622560.1| hypothetical protein MTR_7g045430 [Medicago truncatula] gi|355497575|gb|AES78778.1| hypothetical protein MTR_7g045430 [Medicago truncatula] Length = 483 Score = 40.4 bits (93), Expect(2) = 6e-07 Identities = 17/28 (60%), Positives = 23/28 (82%) Frame = -3 Query: 204 FKPIRSQILLIEPFPSLAKIYSLVRQEE 121 F +R+Q+LL++P PSL K+YSLV QEE Sbjct: 159 FSVVRTQVLLVDPLPSLNKVYSLVVQEE 186 Score = 37.7 bits (86), Expect(2) = 6e-07 Identities = 28/77 (36%), Positives = 45/77 (58%), Gaps = 6/77 (7%) Frame = -1 Query: 404 FPKTSVSM*PRLKQESTTVHAYFTSLKSLWDELDS---LSN-VCLYLWLRLSSMEKKI-- 243 F TS+ + LKQ + + YFT +KSLW+EL S +SN C++ +S KI Sbjct: 84 FCDTSLEVWLDLKQSFSKIDHYFTKMKSLWEELSSHRPISNCACVHPCRCAASKVAKIHK 143 Query: 242 QDDRAMKFMQDHVSNQF 192 +D+ M+F+ D +++QF Sbjct: 144 NEDQIMQFLID-LNDQF 159 >emb|CAN68148.1| hypothetical protein VITISV_035665 [Vitis vinifera] Length = 1813 Score = 40.0 bits (92), Expect(2) = 1e-06 Identities = 17/45 (37%), Positives = 28/45 (62%) Frame = -3 Query: 204 FKPIRSQILLIEPFPSLAKIYSLVRQEEKQQKIHDFPPPTLEAAA 70 +K +RS IL++ P P++ + YSL+ QEE Q+++ P AA Sbjct: 478 YKAVRSNILMMSPLPNVRQAYSLIVQEEMQRQVSSEPTENFSIAA 522 Score = 37.0 bits (84), Expect(2) = 1e-06 Identities = 20/52 (38%), Positives = 35/52 (67%) Frame = -1 Query: 371 LKQESTTVHAYFTSLKSLWDELDSLSNVCLYLWLRLSSMEKKIQDDRAMKFM 216 + Q + TV AYFT +K+LWDEL++ + L R + +E++ ++DR M+F+ Sbjct: 422 MSQGTMTVAAYFTKIKALWDELETYRSP-LTCNQRQAHLEQR-EEDRLMQFL 471 >emb|CAN60374.1| hypothetical protein VITISV_001215 [Vitis vinifera] Length = 1535 Score = 41.6 bits (96), Expect(2) = 5e-06 Identities = 26/62 (41%), Positives = 32/62 (51%), Gaps = 5/62 (8%) Frame = -3 Query: 204 FKPIRSQILLIEPFPSLAKIYSLVRQEEKQQKI---HDFPPPTLEA--AALSNQFSNNKT 40 + IR QILL+ P PS+ + YS V QEEKQ+ + H A A SNQ NN Sbjct: 210 YSAIRGQILLMNPLPSIRQAYSSVCQEEKQRLLSATHTTAESNSSAAMAVRSNQMKNNSA 269 Query: 39 NN 34 N Sbjct: 270 GN 271 Score = 33.5 bits (75), Expect(2) = 5e-06 Identities = 13/26 (50%), Positives = 19/26 (73%) Frame = -1 Query: 368 KQESTTVHAYFTSLKSLWDELDSLSN 291 +QE ++ Y+T LKSLWDEL S ++ Sbjct: 162 RQEQLSISVYYTKLKSLWDELASYND 187 >emb|CAN67322.1| hypothetical protein VITISV_004158 [Vitis vinifera] Length = 1171 Score = 41.6 bits (96), Expect(2) = 5e-06 Identities = 25/62 (40%), Positives = 32/62 (51%), Gaps = 5/62 (8%) Frame = -3 Query: 204 FKPIRSQILLIEPFPSLAKIYSLVRQEEKQQKIHDF-----PPPTLEAAALSNQFSNNKT 40 + IR QILL+ P PS+ + YS V QEEKQ+ + +L A SNQ NN Sbjct: 191 YSAIRGQILLMNPLPSVRQAYSSVCQEEKQRLLSATHTAAESNSSLAMAVRSNQMKNNSV 250 Query: 39 NN 34 N Sbjct: 251 GN 252 Score = 33.5 bits (75), Expect(2) = 5e-06 Identities = 13/26 (50%), Positives = 19/26 (73%) Frame = -1 Query: 368 KQESTTVHAYFTSLKSLWDELDSLSN 291 +QE ++ Y+T LKSLWDEL S ++ Sbjct: 143 RQEQLSISVYYTKLKSLWDELASYND 168 >gb|ABF81417.1| TIR-NBS-LRR type disease resistance protein [Populus trichocarpa] Length = 1867 Score = 41.2 bits (95), Expect(2) = 6e-06 Identities = 22/49 (44%), Positives = 31/49 (63%) Frame = -3 Query: 204 FKPIRSQILLIEPFPSLAKIYSLVRQEEKQQKIHDFPPPTLEAAALSNQ 58 +K IR QILL+ P P + + YS + QEEKQ+ + D T E AA++ Q Sbjct: 132 YKAIRGQILLMNPLPDVRQAYSSIVQEEKQRSLCDI-HETTETAAMAVQ 179 Score = 33.5 bits (75), Expect(2) = 6e-06 Identities = 16/29 (55%), Positives = 18/29 (62%) Frame = -1 Query: 386 SM*PRLKQESTTVHAYFTSLKSLWDELDS 300 S+ P L TV AY+T LK LWDEL S Sbjct: 76 SITPDLADTQMTVAAYYTKLKGLWDELGS 104