BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00027427
         (339 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275605.1| PREDICTED: pentatricopeptide repeat-containi...   138   4e-31
emb|CBI27232.3| unnamed protein product [Vitis vinifera]              138   4e-31
ref|XP_002297917.1| predicted protein [Populus trichocarpa] gi|2...   137   1e-30
ref|XP_002304600.1| predicted protein [Populus trichocarpa] gi|2...   137   1e-30
ref|XP_002867892.1| EMB1025 [Arabidopsis lyrata subsp. lyrata] g...   129   2e-28

>ref|XP_002275605.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Vitis vinifera]
          Length = 644

 Score =  138 bits (348), Expect = 4e-31
 Identities = 68/114 (59%), Positives = 89/114 (78%), Gaps = 2/114 (1%)
 Frame = +2

Query: 2   ENFASLGDFKSLERVLDRMKREQRVLNEKIFILMFKAYGKAHLCDKVLSLFDAMVEEFGC 181
           EN+A+ GDF +L +V DRMKRE+RV  EK FIL+F+AYGKAHL +K + LF  MV+EF C
Sbjct: 72  ENYANSGDFGTLFQVFDRMKRERRVFIEKNFILVFRAYGKAHLPEKAIELFGRMVDEFQC 131

Query: 182 RQTIRSFNSVLNVLIQERCYDRALLFYSSGI--RMGFSPNFLTYNLIIKALCKM 337
           R+T+RSFNSVLNV+IQE  + RAL FY  G+  +   SPN L++NL+IKA+CK+
Sbjct: 132 RRTVRSFNSVLNVIIQEGLFHRALEFYECGVGGKTNISPNVLSFNLVIKAMCKL 185


>emb|CBI27232.3| unnamed protein product [Vitis vinifera]
          Length = 660

 Score =  138 bits (348), Expect = 4e-31
 Identities = 68/114 (59%), Positives = 89/114 (78%), Gaps = 2/114 (1%)
 Frame = +2

Query: 2   ENFASLGDFKSLERVLDRMKREQRVLNEKIFILMFKAYGKAHLCDKVLSLFDAMVEEFGC 181
           EN+A+ GDF +L +V DRMKRE+RV  EK FIL+F+AYGKAHL +K + LF  MV+EF C
Sbjct: 88  ENYANSGDFGTLFQVFDRMKRERRVFIEKNFILVFRAYGKAHLPEKAIELFGRMVDEFQC 147

Query: 182 RQTIRSFNSVLNVLIQERCYDRALLFYSSGI--RMGFSPNFLTYNLIIKALCKM 337
           R+T+RSFNSVLNV+IQE  + RAL FY  G+  +   SPN L++NL+IKA+CK+
Sbjct: 148 RRTVRSFNSVLNVIIQEGLFHRALEFYECGVGGKTNISPNVLSFNLVIKAMCKL 201


>ref|XP_002297917.1| predicted protein [Populus trichocarpa] gi|222845175|gb|EEE82722.1|
           predicted protein [Populus trichocarpa]
          Length = 670

 Score =  137 bits (344), Expect = 1e-30
 Identities = 70/114 (61%), Positives = 90/114 (78%), Gaps = 3/114 (2%)
 Frame = +2

Query: 5   NFASLGDFKSLERVLDRMKREQRVLNEKIFILMFKAYGKAHLCDKVLSLFDAMVEEFGCR 184
           N+A+LGDFKSLE+VLDRMK E+RV+ EK FI++FKAYGKAHL +K + LFD M  EF C+
Sbjct: 99  NYANLGDFKSLEKVLDRMKCEKRVIFEKCFIVIFKAYGKAHLPEKAVDLFDRMACEFECK 158

Query: 185 QTIRSFNSVLNVLIQERCYDRALLFYSSGI---RMGFSPNFLTYNLIIKALCKM 337
           +T +SFNSVLNV+IQE  + RAL FY+  I    +  SPN LT+NL+IKA+CK+
Sbjct: 159 RTGKSFNSVLNVIIQEGLFHRALEFYNHVIGAKGVSISPNVLTFNLVIKAMCKV 212


>ref|XP_002304600.1| predicted protein [Populus trichocarpa] gi|222842032|gb|EEE79579.1|
           predicted protein [Populus trichocarpa]
          Length = 641

 Score =  137 bits (344), Expect = 1e-30
 Identities = 67/115 (58%), Positives = 91/115 (79%), Gaps = 3/115 (2%)
 Frame = +2

Query: 2   ENFASLGDFKSLERVLDRMKREQRVLNEKIFILMFKAYGKAHLCDKVLSLFDAMVEEFGC 181
           +N+A+LGDFKSLE+VLDRM+ E+RV+ EK F+++FKAYGKAHL +K + LFD M  EF C
Sbjct: 68  DNYANLGDFKSLEKVLDRMRCEKRVVVEKCFVVIFKAYGKAHLPEKAVGLFDRMAYEFEC 127

Query: 182 RQTIRSFNSVLNVLIQERCYDRALLFYSSGI---RMGFSPNFLTYNLIIKALCKM 337
           ++T++SFNSVLNV+IQE  + RAL FY+  I    +  SPN LT+NL+IK +CK+
Sbjct: 128 KRTVKSFNSVLNVIIQEGLFYRALEFYNHVIGAKGVNISPNVLTFNLVIKTMCKV 182


>ref|XP_002867892.1| EMB1025 [Arabidopsis lyrata subsp. lyrata]
           gi|297313728|gb|EFH44151.1| EMB1025 [Arabidopsis lyrata
           subsp. lyrata]
          Length = 658

 Score =  129 bits (325), Expect = 2e-28
 Identities = 62/116 (53%), Positives = 89/116 (76%), Gaps = 4/116 (3%)
 Frame = +2

Query: 2   ENFASLGDFKSLERVLDRMKREQRVLNEKIFILMFKAYGKAHLCDKVLSLFDAMVEEFGC 181
           EN+A+LGDF S+E++L R++ E RV+ E+ FI++F+AYGKAHL +K + LF  MV+EF C
Sbjct: 85  ENYANLGDFASVEKLLSRIRLENRVIIERSFIVVFRAYGKAHLPEKAVDLFHRMVDEFRC 144

Query: 182 RQTIRSFNSVLNVLIQERCYDRALLFY----SSGIRMGFSPNFLTYNLIIKALCKM 337
           +++++SFNSVLNV+I E  Y R L FY    +S + M  SPN L++NL+IKALCK+
Sbjct: 145 KRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLVIKALCKL 200