BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00027419
         (354 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283446.2| PREDICTED: putative pentatricopeptide repeat...   135   3e-30
emb|CAN67135.1| hypothetical protein VITISV_005195 [Vitis vinifera]   135   3e-30
ref|XP_002876941.1| predicted protein [Arabidopsis lyrata subsp....   131   5e-29
ref|NP_189226.2| pentatricopeptide repeat-containing protein [Ar...   127   1e-27
ref|XP_002310370.1| predicted protein [Populus trichocarpa] gi|2...   126   2e-27

>ref|XP_002283446.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g25970-like [Vitis vinifera]
          Length = 829

 Score =  135 bits (341), Expect = 3e-30
 Identities = 70/112 (62%), Positives = 84/112 (75%)
 Frame = +2

Query: 17  AYKLFIEMQRLGIVGDLYTYTSVITSSTGPDHQNQGKSLHGLAVKRGFEQATSVGNSLIS 196
           A++LF+EMQ LG   D+YTYTSVI+++    HQ QGKSLHGL +KRG E    + NSLI+
Sbjct: 287 AFQLFLEMQVLGFEPDIYTYTSVISAAFEGSHQGQGKSLHGLVIKRGLEFLVPISNSLIA 346

Query: 197 MYLKVSDKCMVDALNQFNSMESKDSVSCNSILTGFSQNGLSEDALNFFAWMR 352
           MYLK   K M +ALN F S+E+KD VS NSILTGFSQ+GLSEDAL FF  MR
Sbjct: 347 MYLKSHSKSMDEALNIFESLENKDHVSWNSILTGFSQSGLSEDALKFFENMR 398



 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 36/112 (32%), Positives = 60/112 (53%)
 Frame = +2

Query: 17  AYKLFIEMQRLGIVGDLYTYTSVITSSTGPDHQNQGKSLHGLAVKRGFEQATSVGNSLIS 196
           A K F  M+   +V D Y +++V+ S +       G+ +H L +K GFE    V +SLI 
Sbjct: 390 ALKFFENMRSQYVVIDHYAFSAVLRSCSDLATLQLGQQVHVLVLKSGFEPNGFVASSLIF 449

Query: 197 MYLKVSDKCMVDALNQFNSMESKDSVSCNSILTGFSQNGLSEDALNFFAWMR 352
           MY K     + DA   F++     S++ NS++ G++Q+G  + AL+ F  M+
Sbjct: 450 MYSKCG--VIEDARKSFDATPKDSSIAWNSLIFGYAQHGRGKIALDLFFLMK 499


>emb|CAN67135.1| hypothetical protein VITISV_005195 [Vitis vinifera]
          Length = 800

 Score =  135 bits (340), Expect = 3e-30
 Identities = 70/112 (62%), Positives = 84/112 (75%)
 Frame = +2

Query: 17  AYKLFIEMQRLGIVGDLYTYTSVITSSTGPDHQNQGKSLHGLAVKRGFEQATSVGNSLIS 196
           A++LF+EMQ LG   D+YTYTSVI+++    HQ QGKSLHGL +KRG E    + NSLI+
Sbjct: 287 AFELFLEMQVLGFEPDIYTYTSVISAAFEXAHQGQGKSLHGLVIKRGLEFLVPISNSLIA 346

Query: 197 MYLKVSDKCMVDALNQFNSMESKDSVSCNSILTGFSQNGLSEDALNFFAWMR 352
           MYLK   K M +ALN F S+E+KD VS NSILTGFSQ+GLSEDAL FF  MR
Sbjct: 347 MYLKSHSKSMDEALNIFESLENKDHVSWNSILTGFSQSGLSEDALKFFENMR 398


>ref|XP_002876941.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297322779|gb|EFH53200.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 652

 Score =  131 bits (330), Expect = 5e-29
 Identities = 63/112 (56%), Positives = 85/112 (75%)
 Frame = +2

Query: 17  AYKLFIEMQRLGIVGDLYTYTSVITSSTGPDHQNQGKSLHGLAVKRGFEQATSVGNSLIS 196
           A++LF EM R  I  D+YTYT ++++ +G +HQ+ GKSLHGL +K+G EQ TSV N+LIS
Sbjct: 235 AFELFTEMHRNWIETDIYTYTGIVSACSGEEHQSFGKSLHGLVIKKGLEQVTSVSNALIS 294

Query: 197 MYLKVSDKCMVDALNQFNSMESKDSVSCNSILTGFSQNGLSEDALNFFAWMR 352
           MY++     M DAL+ F S++ KD VS NSI+TGFSQNGLSEDA+ FF ++R
Sbjct: 295 MYIQFPTGVMKDALSLFESLKPKDLVSWNSIMTGFSQNGLSEDAVKFFRYLR 346



 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 32/94 (34%), Positives = 52/94 (55%)
 Frame = +2

Query: 26  LFIEMQRLGIVGDLYTYTSVITSSTGPDHQNQGKSLHGLAVKRGFEQATSVGNSLISMYL 205
           LF +M+R G   D Y+++ ++         + G+ +HGL VK G+E    VG+SL+ MY 
Sbjct: 34  LFTDMKRCGCYVDGYSFSRLLKGIASAKRFDLGEQVHGLVVKGGYECNVYVGSSLVDMYA 93

Query: 206 KVSDKCMVDALNQFNSMESKDSVSCNSILTGFSQ 307
           K   + + DA   F  +   +SVS N+++ GF Q
Sbjct: 94  KC--ERVEDAFGAFMEILEPNSVSWNALIAGFVQ 125


>ref|NP_189226.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|218546761|sp|Q9LU94.2|PP255_ARATH RecName:
           Full=Putative pentatricopeptide repeat-containing
           protein At3g25970 gi|332643575|gb|AEE77096.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 701

 Score =  127 bits (318), Expect = 1e-27
 Identities = 59/112 (52%), Positives = 86/112 (76%)
 Frame = +2

Query: 17  AYKLFIEMQRLGIVGDLYTYTSVITSSTGPDHQNQGKSLHGLAVKRGFEQATSVGNSLIS 196
           A++LFI+MQR  +  D+YTYT ++++ +G +HQ  GKSLHG+ +K+G EQ TS  N+LIS
Sbjct: 289 AFELFIQMQRHWVETDIYTYTGLLSACSGEEHQIFGKSLHGMVIKKGLEQVTSATNALIS 348

Query: 197 MYLKVSDKCMVDALNQFNSMESKDSVSCNSILTGFSQNGLSEDALNFFAWMR 352
           MY++     M DAL+ F S++SKD +S NSI+TGF+Q GLSEDA+ FF+++R
Sbjct: 349 MYIQFPTGTMEDALSLFESLKSKDLISWNSIITGFAQKGLSEDAVKFFSYLR 400



 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 32/97 (32%), Positives = 53/97 (54%)
 Frame = +2

Query: 17  AYKLFIEMQRLGIVGDLYTYTSVITSSTGPDHQNQGKSLHGLAVKRGFEQATSVGNSLIS 196
           A+ LF  M+R G   D Y+++ ++         + G+ +HGL +K G+E    VG+SL+ 
Sbjct: 85  AWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSSLVD 144

Query: 197 MYLKVSDKCMVDALNQFNSMESKDSVSCNSILTGFSQ 307
           MY K   + + DA   F  +   +SVS N+++ GF Q
Sbjct: 145 MYAKC--ERVEDAFEAFKEISEPNSVSWNALIAGFVQ 179


>ref|XP_002310370.1| predicted protein [Populus trichocarpa] gi|222853273|gb|EEE90820.1|
           predicted protein [Populus trichocarpa]
          Length = 711

 Score =  126 bits (317), Expect = 2e-27
 Identities = 63/112 (56%), Positives = 81/112 (72%)
 Frame = +2

Query: 17  AYKLFIEMQRLGIVGDLYTYTSVITSSTGPDHQNQGKSLHGLAVKRGFEQATSVGNSLIS 196
           A+ LF+EMQ  G   D+YTYT VI++     H+N GKS H L +KRG E++ ++ N+LI+
Sbjct: 289 AFNLFLEMQGFGFEPDIYTYTCVISACFAAAHKNYGKSFHALVIKRGLEESVTICNALIT 348

Query: 197 MYLKVSDKCMVDALNQFNSMESKDSVSCNSILTGFSQNGLSEDALNFFAWMR 352
           MYLK+++K M  ALN F+SM+SKD VS NSILTGFSQ G SEDAL  F  MR
Sbjct: 349 MYLKLNNKSMEAALNLFHSMKSKDRVSWNSILTGFSQMGFSEDALKLFGHMR 400



 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 32/99 (32%), Positives = 54/99 (54%)
 Frame = +2

Query: 17  AYKLFIEMQRLGIVGDLYTYTSVITSSTGPDHQNQGKSLHGLAVKRGFEQATSVGNSLIS 196
           A++    M+R G   D YT+ S++         + G+ +H L VK G+EQ+   G++L+ 
Sbjct: 86  AWEFLKSMKRRGFQADGYTFGSILKGVAHACRHDLGQQVHSLIVKIGYEQSVYAGSALLD 145

Query: 197 MYLKVSDKCMVDALNQFNSMESKDSVSCNSILTGFSQNG 313
           MY K   + + DA + F  M  ++ VS N+++ GF Q G
Sbjct: 146 MYAKC--ERVEDAYDVFQGMPVRNFVSWNALIDGFVQVG 182



 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 38/112 (33%), Positives = 58/112 (51%)
 Frame = +2

Query: 17  AYKLFIEMQRLGIVGDLYTYTSVITSSTGPDHQNQGKSLHGLAVKRGFEQATSVGNSLIS 196
           A KLF  M+      D Y Y++V+ S +       G+ +H L VK GF+    V +SLI 
Sbjct: 392 ALKLFGHMRSSLEEIDDYAYSAVLRSCSDLAILQLGQQIHLLTVKTGFDSNDFVASSLIF 451

Query: 197 MYLKVSDKCMVDALNQFNSMESKDSVSCNSILTGFSQNGLSEDALNFFAWMR 352
           MY K     + DA   F     + S++ NSI+  ++Q+G  + AL+ F+ MR
Sbjct: 452 MYSKCG--IIEDAWKCFEDTTKESSITWNSIMFAYAQHGQGDVALDLFSIMR 501