BLASTX nr result

ID: Coptis21_contig00027412 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00027412
         (795 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269013.2| PREDICTED: probable mitochondrial chaperone ...   327   2e-87
emb|CAN62143.1| hypothetical protein VITISV_023956 [Vitis vinifera]   324   2e-86
ref|XP_002534483.1| ATP binding protein, putative [Ricinus commu...   322   5e-86
ref|XP_003549478.1| PREDICTED: probable mitochondrial chaperone ...   313   2e-83
ref|XP_002329630.1| predicted protein [Populus trichocarpa] gi|2...   311   8e-83

>ref|XP_002269013.2| PREDICTED: probable mitochondrial chaperone BCS1-B-like [Vitis
            vinifera] gi|297735391|emb|CBI17831.3| unnamed protein
            product [Vitis vinifera]
          Length = 514

 Score =  327 bits (838), Expect = 2e-87
 Identities = 174/262 (66%), Positives = 204/262 (77%), Gaps = 6/262 (2%)
 Frame = -2

Query: 794  KSSMIAAMANYLGYDIYDLELTEVNTNSELRKLLMKTTSKSIIVIEDIDCSINLTNRKRP 615
            KSSMIAAMAN+LGYD+YDLELTEV+TNSELRKLLMKT+SKSIIVIEDIDCSINL NRK+ 
Sbjct: 249  KSSMIAAMANFLGYDVYDLELTEVHTNSELRKLLMKTSSKSIIVIEDIDCSINLGNRKKS 308

Query: 614  N--GKPSYEPVPHPXXXXXXXXXXXXXXXXSITLSGLLNFTDGLWSCCGSERIFVFTTNH 441
            N  G+  Y+  PH                  ITLSGLLNFTDGLWSCCGSERIFVFTTNH
Sbjct: 309  NSGGRQGYDGTPHEMRGGGGAGAGEDGVNS-ITLSGLLNFTDGLWSCCGSERIFVFTTNH 367

Query: 440  IEKLDPALLRSGRMDMHIFMSFCSFPALMILLGNYLGLSEGDIEKNLCSEFEEVMDKAEM 261
            IEKLDPALLRSGRMDMHIFMS+C+FPAL ILL NYLG SE D+   +  E E V+DKA+M
Sbjct: 368  IEKLDPALLRSGRMDMHIFMSYCTFPALKILLQNYLGFSEPDMGLQIMEEIEAVIDKAQM 427

Query: 260  TPADISEILIKNRRDKEKAVLELLNALKINAEKNRVV--EASRVKDSSAVEEEEQEKRAL 87
            TPADISE+LIKNRR K+KA+ ELL AL+  AE+ +     ++R K+S+ VEEEEQEKRAL
Sbjct: 428  TPADISEVLIKNRRHKDKALSELLEALRNMAERRKKENWRSAREKNSTEVEEEEQEKRAL 487

Query: 86   ESPTEGC--ELLKNCNKGNDEE 27
            E+P +GC  E  ++C K  +++
Sbjct: 488  ENPKQGCDEEFEESCKKEEEDD 509


>emb|CAN62143.1| hypothetical protein VITISV_023956 [Vitis vinifera]
          Length = 501

 Score =  324 bits (830), Expect = 2e-86
 Identities = 172/262 (65%), Positives = 203/262 (77%), Gaps = 6/262 (2%)
 Frame = -2

Query: 794  KSSMIAAMANYLGYDIYDLELTEVNTNSELRKLLMKTTSKSIIVIEDIDCSINLTNRKRP 615
            + SMIAAMAN+LGYD+YDLELTEV+TNSELRKLLMKT+SKSIIVIEDIDCSINL NRK+ 
Sbjct: 236  EESMIAAMANFLGYDVYDLELTEVHTNSELRKLLMKTSSKSIIVIEDIDCSINLGNRKKS 295

Query: 614  N--GKPSYEPVPHPXXXXXXXXXXXXXXXXSITLSGLLNFTDGLWSCCGSERIFVFTTNH 441
            N  G+  Y+  PH                  ITLSGLLNFTDGLWSCCGSERIFVFTTNH
Sbjct: 296  NSGGRQGYDGTPHEMRGGGGAGAGEDGVNS-ITLSGLLNFTDGLWSCCGSERIFVFTTNH 354

Query: 440  IEKLDPALLRSGRMDMHIFMSFCSFPALMILLGNYLGLSEGDIEKNLCSEFEEVMDKAEM 261
            IEKLDPALLRSGRMDMHIFMS+C+FPAL ILL NYLG SE D+   +  E E V+DKA+M
Sbjct: 355  IEKLDPALLRSGRMDMHIFMSYCTFPALKILLQNYLGFSEPDMGLQIMEEIEAVIDKAQM 414

Query: 260  TPADISEILIKNRRDKEKAVLELLNALKINAEKNRVV--EASRVKDSSAVEEEEQEKRAL 87
            TPADISE+LIKNRR K+KA+ ELL AL+  AE+ +     ++R K+S+ VEEEEQEKRAL
Sbjct: 415  TPADISEVLIKNRRHKDKALSELLEALRNMAERRKKENWRSAREKNSTEVEEEEQEKRAL 474

Query: 86   ESPTEGC--ELLKNCNKGNDEE 27
            E+P +GC  E  ++C K  +++
Sbjct: 475  ENPKQGCDEEFEESCKKEEEDD 496


>ref|XP_002534483.1| ATP binding protein, putative [Ricinus communis]
            gi|223525217|gb|EEF27900.1| ATP binding protein, putative
            [Ricinus communis]
          Length = 518

 Score =  322 bits (826), Expect = 5e-86
 Identities = 178/264 (67%), Positives = 199/264 (75%), Gaps = 8/264 (3%)
 Frame = -2

Query: 794  KSSMIAAMANYLGYDIYDLELTEVNTNSELRKLLMKTTSKSIIVIEDIDCSINLTNRKRP 615
            KSSMIAAMANYLGYDIYDLELTEV+TNSELRKLLMKTTSKSIIVIEDIDCSINL+NRK+ 
Sbjct: 250  KSSMIAAMANYLGYDIYDLELTEVHTNSELRKLLMKTTSKSIIVIEDIDCSINLSNRKKS 309

Query: 614  NGKPSYEPVPHPXXXXXXXXXXXXXXXXSITLSGLLNFTDGLWSCCGSERIFVFTTNHIE 435
            N                           SITLSGLLNFTDGLWSCCGSERIFVFTTNHIE
Sbjct: 310  NTNSMARSYYDQEMRSGSGGASGEDGGNSITLSGLLNFTDGLWSCCGSERIFVFTTNHIE 369

Query: 434  KLDPALLRSGRMDMHIFMSFCSFPALMILLGNYLGL---SEGDIEKNLCSEFEEVMDKAE 264
            KLDPALLRSGRMDMHIFMS+CSFPAL ILL NYLG     EGD+E  +  E E+V+++AE
Sbjct: 370  KLDPALLRSGRMDMHIFMSYCSFPALKILLKNYLGYDHEKEGDLEDGILEELEQVINEAE 429

Query: 263  MTPADISEILIKNRRD---KEKAVLELLNALKINAEKNRVVEASRVKD-SSAVEEEEQEK 96
            MTPAD+SE+LIK+RR+   K +A+ ELL ALK  AE+N      R K+ +  VEEEEQEK
Sbjct: 430  MTPADVSEVLIKHRRNKXXKNRALRELLGALKERAERNLKNGGLREKNLNDIVEEEEQEK 489

Query: 95   RALESPTEGCEL-LKNCNKGNDEE 27
            RALESP EGCE   +NC KG D +
Sbjct: 490  RALESPKEGCECEEENCKKGEDHD 513


>ref|XP_003549478.1| PREDICTED: probable mitochondrial chaperone BCS1-B-like [Glycine max]
          Length = 512

 Score =  313 bits (803), Expect = 2e-83
 Identities = 173/262 (66%), Positives = 192/262 (73%), Gaps = 4/262 (1%)
 Frame = -2

Query: 794  KSSMIAAMANYLGYDIYDLELTEVNTNSELRKLLMKTTSKSIIVIEDIDCSINLTNRKRP 615
            KSSMIAAMAN+LGYDIYDLELTEV+ NSELRKLLMKT+SKSIIVIEDIDCSINLTNRK  
Sbjct: 250  KSSMIAAMANFLGYDIYDLELTEVHNNSELRKLLMKTSSKSIIVIEDIDCSINLTNRKNN 309

Query: 614  NGKPSYEPVP--HPXXXXXXXXXXXXXXXXSITLSGLLNFTDGLWSCCGSERIFVFTTNH 441
            N   S       +                 +ITLSGLLNFTDGLWSCCGSERIFVFTTNH
Sbjct: 310  NSSSSVSASTGYYDSEIRGGGGGCAEEGGNNITLSGLLNFTDGLWSCCGSERIFVFTTNH 369

Query: 440  IEKLDPALLRSGRMDMHIFMSFCSFPALMILLGNYLGLSEGDIEKNLCSEFEEVMDKAEM 261
            IEKLDPALLRSGRMDMHIFMS+CSFPAL ILL NYLG  E ++E+ +    EEV+D A M
Sbjct: 370  IEKLDPALLRSGRMDMHIFMSYCSFPALKILLKNYLGCEECELEEPILKRLEEVVDVARM 429

Query: 260  TPADISEILIKNRRDKEKAVLELLNALKINAEKNRVVEASRVKDSSAVEEEEQEKRAL-- 87
            TPADISE+LIKNRR +EKAV ELL  LK+ AE N      RV  +   EEEEQEKRAL  
Sbjct: 430  TPADISEVLIKNRRKREKAVEELLETLKLRAEMNEKNGVLRV-TNGVEEEEEQEKRALDS 488

Query: 86   ESPTEGCELLKNCNKGNDEEAK 21
            ESP +  E+  NC +  +EE K
Sbjct: 489  ESPKQESEIEDNCKEEEEEEEK 510


>ref|XP_002329630.1| predicted protein [Populus trichocarpa] gi|222870511|gb|EEF07642.1|
           predicted protein [Populus trichocarpa]
          Length = 474

 Score =  311 bits (798), Expect = 8e-83
 Identities = 173/249 (69%), Positives = 195/249 (78%), Gaps = 7/249 (2%)
 Frame = -2

Query: 794 KSSMIAAMANYLGYDIYDLELTEVNTNSELRKLLMKTTSKSIIVIEDIDCSINLTNRKR- 618
           KSSMIAAMANYLGYDIYDLELTEV+ NSELRKLLMKT+SKSIIVIEDIDCSI+L+NRK+ 
Sbjct: 242 KSSMIAAMANYLGYDIYDLELTEVHHNSELRKLLMKTSSKSIIVIEDIDCSIDLSNRKKG 301

Query: 617 -PNGKPSYEPVPHPXXXXXXXXXXXXXXXXSITLSGLLNFTDGLWSCCGSERIFVFTTNH 441
            PN   S                       SITLSGLLNFTDGLWSCCGSERIFVFTTNH
Sbjct: 302 SPNNSSSI----------------GRSYWNSITLSGLLNFTDGLWSCCGSERIFVFTTNH 345

Query: 440 IEKLDPALLRSGRMDMHIFMSFCSFPALMILLGNYLGLSEGDIEKNLCSEFEEVMDKAEM 261
           I+KLDPALLRSGRMDMH+FMS+CSFPAL ILL NYLG +E D+++ +  E EEV+DKAEM
Sbjct: 346 IDKLDPALLRSGRMDMHVFMSYCSFPALRILLKNYLGNAESDLDEGVLKELEEVIDKAEM 405

Query: 260 TPADISEILIKNRRDKEKAVLELLNALKINAE-KNRVVEASRVKDSSAV----EEEEQEK 96
           TPADISE+LIKNRR+K++AV+ELL ALK  AE K +  E  R K+ + V    EEEEQEK
Sbjct: 406 TPADISELLIKNRRNKDRAVIELLEALKNKAEMKLKSGECVREKNLNDVGEEEEEEEQEK 465

Query: 95  RALESPTEG 69
           RALESP EG
Sbjct: 466 RALESPKEG 474


Top