BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00027403
         (393 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002302294.1| predicted protein [Populus trichocarpa] gi|2...    74   1e-11
ref|XP_002513917.1| Ribosome-binding protein, putative [Ricinus ...    68   7e-10
ref|XP_003634472.1| PREDICTED: synaptonemal complex protein 2-li...    65   6e-09
emb|CBI19158.3| unnamed protein product [Vitis vinifera]               65   6e-09
ref|XP_003615101.1| Synaptonemal complex protein [Medicago trunc...    63   3e-08

>ref|XP_002302294.1| predicted protein [Populus trichocarpa] gi|222844020|gb|EEE81567.1|
           predicted protein [Populus trichocarpa]
          Length = 874

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 45/129 (34%), Positives = 61/129 (47%)
 Frame = +3

Query: 6   LKRAQRQFDQLHDSFSQVTSENGAFRFENXXXXXXXXXXXXXXXXLMVQHAEECRLTEER 185
           +K  QRQ+DQLHD    V SE  A +  N                +M Q +EEC+  +ER
Sbjct: 333 VKHVQRQYDQLHDQSLSVKSERDAMKLVNQELNDKIIELQKSQESIMAQLSEECQSAKER 392

Query: 186 IRNLESEIQALIXXXXXXXXXXXXXXXNIEQXXXXXXXXXXKVQDLLLKISALESENQDV 365
           I++LESE + L+                I+           K+QDLLLKISALE EN+D 
Sbjct: 393 IQSLESEAEMLMSKKKETEMLVSKLEEKIDTLSEGSRSSENKMQDLLLKISALEIENKDN 452

Query: 366 QDHFQVNLQ 392
            +  Q  +Q
Sbjct: 453 AERLQDEIQ 461


>ref|XP_002513917.1| Ribosome-binding protein, putative [Ricinus communis]
           gi|223547003|gb|EEF48500.1| Ribosome-binding protein,
           putative [Ricinus communis]
          Length = 868

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 40/128 (31%), Positives = 59/128 (46%)
 Frame = +3

Query: 9   KRAQRQFDQLHDSFSQVTSENGAFRFENXXXXXXXXXXXXXXXXLMVQHAEECRLTEERI 188
           K AQ++F+QLHD F  V SE  A +  N                +  Q +E CRL  +RI
Sbjct: 338 KHAQKKFNQLHDKFLCVASEKDALQLVNQELNDKIIELQKAQDSIREQLSEGCRLAADRI 397

Query: 189 RNLESEIQALIXXXXXXXXXXXXXXXNIEQXXXXXXXXXXKVQDLLLKISALESENQDVQ 368
           + LESE + L+                I+           K+QDLL K++ LE EN+D+ 
Sbjct: 398 QKLESEAEMLLSKKNETEILVSKLEETIDSLREHLSTSENKMQDLLSKVAELEMENKDIA 457

Query: 369 DHFQVNLQ 392
           +  Q+ L+
Sbjct: 458 EKLQIELR 465


>ref|XP_003634472.1| PREDICTED: synaptonemal complex protein 2-like [Vitis vinifera]
          Length = 868

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 39/127 (30%), Positives = 59/127 (46%)
 Frame = +3

Query: 9   KRAQRQFDQLHDSFSQVTSENGAFRFENXXXXXXXXXXXXXXXXLMVQHAEECRLTEERI 188
           K +Q+Q+ QLH +F  + SE  A + +N                +  Q AEECRL  E+I
Sbjct: 338 KHSQQQYAQLHRTFLCIASEKDALQLKNQVLNNKVVELQEAHNFVTAQLAEECRLAGEKI 397

Query: 189 RNLESEIQALIXXXXXXXXXXXXXXXNIEQXXXXXXXXXXKVQDLLLKISALESENQDVQ 368
           + LESE++ L+                I            K++DLLLK+S LE+EN+D  
Sbjct: 398 QTLESEVENLVSRKIDKEMLVTKLEEIINTQSESLKSSENKMKDLLLKLSTLETENKDNT 457

Query: 369 DHFQVNL 389
           +  Q  +
Sbjct: 458 EKLQAEI 464


>emb|CBI19158.3| unnamed protein product [Vitis vinifera]
          Length = 876

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 39/127 (30%), Positives = 59/127 (46%)
 Frame = +3

Query: 9   KRAQRQFDQLHDSFSQVTSENGAFRFENXXXXXXXXXXXXXXXXLMVQHAEECRLTEERI 188
           K +Q+Q+ QLH +F  + SE  A + +N                +  Q AEECRL  E+I
Sbjct: 338 KHSQQQYAQLHRTFLCIASEKDALQLKNQVLNNKVVELQEAHNFVTAQLAEECRLAGEKI 397

Query: 189 RNLESEIQALIXXXXXXXXXXXXXXXNIEQXXXXXXXXXXKVQDLLLKISALESENQDVQ 368
           + LESE++ L+                I            K++DLLLK+S LE+EN+D  
Sbjct: 398 QTLESEVENLVSRKIDKEMLVTKLEEIINTQSESLKSSENKMKDLLLKLSTLETENKDNT 457

Query: 369 DHFQVNL 389
           +  Q  +
Sbjct: 458 EKLQAEI 464


>ref|XP_003615101.1| Synaptonemal complex protein [Medicago truncatula]
           gi|355516436|gb|AES98059.1| Synaptonemal complex protein
           [Medicago truncatula]
          Length = 999

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 39/127 (30%), Positives = 56/127 (44%)
 Frame = +3

Query: 9   KRAQRQFDQLHDSFSQVTSENGAFRFENXXXXXXXXXXXXXXXXLMVQHAEECRLTEERI 188
           K AQ Q+D LH  F  ++SE       N                 + Q+ E+CRL  ERI
Sbjct: 378 KHAQNQYDVLHTKFLVLSSEKDEIHMTNQELRSSLNDLRKVQEATVAQYTEDCRLAAERI 437

Query: 189 RNLESEIQALIXXXXXXXXXXXXXXXNIEQXXXXXXXXXXKVQDLLLKISALESENQDVQ 368
           + LESE +ALI                 E           ++Q LLLKISALE+E+++  
Sbjct: 438 QRLESEAEALISKKAETEVTISKLEEKAEILLGSVTSSENQMQGLLLKISALETESKENM 497

Query: 369 DHFQVNL 389
           +  Q ++
Sbjct: 498 ERMQADI 504