BLASTX nr result

ID: Coptis21_contig00027382 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00027382
         (293 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EEC84982.1| hypothetical protein OsI_32248 [Oryza sativa Indi...    64   1e-08
emb|CAB78008.1| putative protein [Arabidopsis thaliana] gi|73210...    64   1e-08
gb|EEC83784.1| hypothetical protein OsI_29682 [Oryza sativa Indi...    63   3e-08
gb|EEC76774.1| hypothetical protein OsI_14862 [Oryza sativa Indi...    61   8e-08
ref|XP_002468588.1| hypothetical protein SORBIDRAFT_01g048580 [S...    61   1e-07

>gb|EEC84982.1| hypothetical protein OsI_32248 [Oryza sativa Indica Group]
           gi|222630794|gb|EEE62926.1| hypothetical protein
           OsJ_17731 [Oryza sativa Japonica Group]
          Length = 893

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 30/90 (33%), Positives = 57/90 (63%)
 Frame = +1

Query: 7   SRFLLQAQAAQDISGIKISRRAPSASHMVYADDLIVFCKTSPFEVHKIKKIMDL*CNATS 186
           S  L  A+   D+SG+K+ ++APS SH+++ADD ++  K +      ++ +++L  + + 
Sbjct: 327 SSLLYAAEERGDLSGVKVCQQAPSVSHLLFADDSLLLFKVNERSAQCLQNVLNLYESCSG 386

Query: 187 QMVSLDKSTILFSGGTSQDIQEAIMHTLQV 276
           Q+V+ DKS+I+FS  TSQ  ++ +M  L +
Sbjct: 387 QIVNKDKSSIMFSKNTSQADRKMVMEILDI 416


>emb|CAB78008.1| putative protein [Arabidopsis thaliana] gi|7321072|emb|CAB82119.1|
           putative protein [Arabidopsis thaliana]
          Length = 947

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 32/85 (37%), Positives = 53/85 (62%)
 Frame = +1

Query: 4   LSRFLLQAQAAQDISGIKISRRAPSASHMVYADDLIVFCKTSPFEVHKIKKIMDL*CNAT 183
           L   + +A A ++   I +S+  P  SH+ +ADDLI+F + S  ++  I++I++  C A+
Sbjct: 328 LCHMIDRAVAVKEWKSIGLSQGGPKISHICFADDLILFAEASVSQIRVIRRILETFCIAS 387

Query: 184 SQMVSLDKSTILFSGGTSQDIQEAI 258
            Q VSLDKS I FS   S+D+++ I
Sbjct: 388 GQKVSLDKSKIFFSKNVSRDLEKLI 412


>gb|EEC83784.1| hypothetical protein OsI_29682 [Oryza sativa Indica Group]
          Length = 666

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 28/90 (31%), Positives = 55/90 (61%)
 Frame = +1

Query: 4   LSRFLLQAQAAQDISGIKISRRAPSASHMVYADDLIVFCKTSPFEVHKIKKIMDL*CNAT 183
           LS  L +A    +I+ +K+ RRAP  SH+++ADD ++F K +  + + +K +++    +T
Sbjct: 45  LSALLKEAVQNGEITPVKVCRRAPGVSHLLFADDTLLFFKANSDQANMVKNVLESYAAST 104

Query: 184 SQMVSLDKSTILFSGGTSQDIQEAIMHTLQ 273
            Q+++  K +ILF     +++QE + + LQ
Sbjct: 105 GQLINPQKCSILFGHACPEELQEEVKNVLQ 134


>gb|EEC76774.1| hypothetical protein OsI_14862 [Oryza sativa Indica Group]
          Length = 1860

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 31/91 (34%), Positives = 50/91 (54%)
 Frame = +1

Query: 4    LSRFLLQAQAAQDISGIKISRRAPSASHMVYADDLIVFCKTSPFEVHKIKKIMDL*CNAT 183
            LS  L + ++   I GI+  R  P  SH+++ADD I F ++    V  +K  +   C A+
Sbjct: 1425 LSSILQKKESMGVIQGIRNGRLGPPISHLLFADDSIFFARSDLHSVQGLKDALQAYCKAS 1484

Query: 184  SQMVSLDKSTILFSGGTSQDIQEAIMHTLQV 276
             Q ++L KS+I F     +DI+ ++  TLQV
Sbjct: 1485 GQKINLQKSSIFFGQNCPEDIKNSVKETLQV 1515


>ref|XP_002468588.1| hypothetical protein SORBIDRAFT_01g048580 [Sorghum bicolor]
           gi|241922442|gb|EER95586.1| hypothetical protein
           SORBIDRAFT_01g048580 [Sorghum bicolor]
          Length = 517

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 30/78 (38%), Positives = 49/78 (62%)
 Frame = +1

Query: 4   LSRFLLQAQAAQDISGIKISRRAPSASHMVYADDLIVFCKTSPFEVHKIKKIMDL*CNAT 183
           LS  L  A+ A  I GIKI R AP  +H+ +ADD ++  +    + H++K I+++   A+
Sbjct: 75  LSAMLQSAENAGKIEGIKICRGAPRVNHLFFADDSLMLMRARKEDAHELKHILEIYERAS 134

Query: 184 SQMVSLDKSTILFSGGTS 237
            Q+++ DKS+I+FS  TS
Sbjct: 135 GQVINKDKSSIMFSPNTS 152


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