BLASTX nr result

ID: Coptis21_contig00027368 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00027368
         (661 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285282.1| PREDICTED: interferon-related developmental ...   141   1e-31
ref|XP_002510104.1| conserved hypothetical protein [Ricinus comm...   135   7e-30
gb|AAF24950.1|AC012375_13 T22C5.21 [Arabidopsis thaliana]             124   2e-26
ref|NP_849715.2| Interferon-related developmental regulator doma...   124   2e-26
ref|XP_002890749.1| hypothetical protein ARALYDRAFT_472983 [Arab...   124   2e-26

>ref|XP_002285282.1| PREDICTED: interferon-related developmental regulator 1 [Vitis
           vinifera] gi|302142206|emb|CBI19409.3| unnamed protein
           product [Vitis vinifera]
          Length = 446

 Score =  141 bits (355), Expect = 1e-31
 Identities = 78/158 (49%), Positives = 102/158 (64%), Gaps = 3/158 (1%)
 Frame = -2

Query: 525 LAL*FVGLLSLTVGCQDIIGVEHEILEDSVPRISQAXXXXXXXXXXXXXXXXLAIVTFVG 346
           LA   +GLL+LTVG  D     HEILE+SVP ISQA                LAIVTF+G
Sbjct: 109 LACHAIGLLALTVGHGDNA---HEILEESVPPISQALKSSSESSKISWLLECLAIVTFIG 165

Query: 345 EDDPQDTERSMQVIWDFLHHKLEAT---RERNNQVLIAAISAWSFLLANLNSWSISPKLW 175
            +DP++TERSMQ++W  LH KL +    R+ + +V+ A +SAWSFLL  ++ W ++PK W
Sbjct: 166 ANDPEETERSMQIMWQLLHPKLGSNVVARKPSAEVITAVVSAWSFLLTTMDGWKLNPKNW 225

Query: 174 NESIPYLFNLLDESDPSVRMVAGETLALIIEIGVIEKF 61
             SI Y  +LLD+ D SVR+ AGE LALI E+G +EKF
Sbjct: 226 QGSISYFSSLLDKDDRSVRIAAGEALALIFEVGSLEKF 263


>ref|XP_002510104.1| conserved hypothetical protein [Ricinus communis]
           gi|223550805|gb|EEF52291.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 448

 Score =  135 bits (340), Expect = 7e-30
 Identities = 76/156 (48%), Positives = 97/156 (62%), Gaps = 3/156 (1%)
 Frame = -2

Query: 510 VGLLSLTVGCQDIIGVEHEILEDSVPRISQAXXXXXXXXXXXXXXXXLAIVTFVGEDDPQ 331
           +GLL+LTVGC D      EILEDSV  ISQA                LA+VTFVG ++P 
Sbjct: 116 IGLLALTVGCGDNA---REILEDSVTPISQALKSGSESTKTASLLECLAVVTFVGGNEPT 172

Query: 330 DTERSMQVIWDFLHHKLE---ATRERNNQVLIAAISAWSFLLANLNSWSISPKLWNESIP 160
           +TERSMQ++W  +  KL    A  + +  V+ A +SAW+FLL  ++ W I PK W ESI 
Sbjct: 173 ETERSMQIMWQLVRPKLGSNVAAAKPSAPVIAAVVSAWAFLLTTMDGWKIDPKDWQESIS 232

Query: 159 YLFNLLDESDPSVRMVAGETLALIIEIGVIEKFSND 52
           YL  LLD+ D SVR+ AGE LALI EIG +EKF+ +
Sbjct: 233 YLSGLLDKDDRSVRIAAGEALALIFEIGSLEKFAGE 268


>gb|AAF24950.1|AC012375_13 T22C5.21 [Arabidopsis thaliana]
          Length = 409

 Score =  124 bits (310), Expect = 2e-26
 Identities = 66/159 (41%), Positives = 100/159 (62%), Gaps = 3/159 (1%)
 Frame = -2

Query: 525 LAL*FVGLLSLTVGCQDIIGVEHEILEDSVPRISQAXXXXXXXXXXXXXXXXLAIVTFVG 346
           LA   +GLL+LTVG  D      E+LE+SV  +SQA                LA++TFVG
Sbjct: 129 LATHVIGLLALTVGLGDHA---QEVLEESVTPLSQALKSGREILKITSILECLAVITFVG 185

Query: 345 EDDPQDTERSMQVIWDFLHHKLEAT---RERNNQVLIAAISAWSFLLANLNSWSISPKLW 175
            +DP+ TE+SMQ+IW  +H KL +     + +  V+ A +S+W+FLL  ++ W++ PK++
Sbjct: 186 GNDPEQTEKSMQIIWQMIHPKLGSNVVATKPSPAVISAVVSSWAFLLTTVDRWTLGPKIF 245

Query: 174 NESIPYLFNLLDESDPSVRMVAGETLALIIEIGVIEKFS 58
            E++ YL  LL++ D SVR+ AGE LA+I E+G +EKF+
Sbjct: 246 QETVTYLSTLLEKDDRSVRIAAGEALAVIYELGTLEKFA 284


>ref|NP_849715.2| Interferon-related developmental regulator domain-containing
           protein [Arabidopsis thaliana]
           gi|332192755|gb|AEE30876.1| Interferon-related
           developmental regulator domain-containing protein
           [Arabidopsis thaliana]
          Length = 426

 Score =  124 bits (310), Expect = 2e-26
 Identities = 66/159 (41%), Positives = 100/159 (62%), Gaps = 3/159 (1%)
 Frame = -2

Query: 525 LAL*FVGLLSLTVGCQDIIGVEHEILEDSVPRISQAXXXXXXXXXXXXXXXXLAIVTFVG 346
           LA   +GLL+LTVG  D      E+LE+SV  +SQA                LA++TFVG
Sbjct: 94  LATHVIGLLALTVGLGDHA---QEVLEESVTPLSQALKSGREILKITSILECLAVITFVG 150

Query: 345 EDDPQDTERSMQVIWDFLHHKLEAT---RERNNQVLIAAISAWSFLLANLNSWSISPKLW 175
            +DP+ TE+SMQ+IW  +H KL +     + +  V+ A +S+W+FLL  ++ W++ PK++
Sbjct: 151 GNDPEQTEKSMQIIWQMIHPKLGSNVVATKPSPAVISAVVSSWAFLLTTVDRWTLGPKIF 210

Query: 174 NESIPYLFNLLDESDPSVRMVAGETLALIIEIGVIEKFS 58
            E++ YL  LL++ D SVR+ AGE LA+I E+G +EKF+
Sbjct: 211 QETVTYLSTLLEKDDRSVRIAAGEALAVIYELGTLEKFA 249


>ref|XP_002890749.1| hypothetical protein ARALYDRAFT_472983 [Arabidopsis lyrata subsp.
           lyrata] gi|297336591|gb|EFH67008.1| hypothetical protein
           ARALYDRAFT_472983 [Arabidopsis lyrata subsp. lyrata]
          Length = 442

 Score =  124 bits (310), Expect = 2e-26
 Identities = 67/159 (42%), Positives = 100/159 (62%), Gaps = 3/159 (1%)
 Frame = -2

Query: 525 LAL*FVGLLSLTVGCQDIIGVEHEILEDSVPRISQAXXXXXXXXXXXXXXXXLAIVTFVG 346
           LA   +GLL+LTVG  +      EILE+SV  +SQA                LA++TFVG
Sbjct: 109 LASHVIGLLALTVGLGE---QAQEILEESVTPLSQALKSGREILRITSILECLAVITFVG 165

Query: 345 EDDPQDTERSMQVIWDFLHHKLEAT---RERNNQVLIAAISAWSFLLANLNSWSISPKLW 175
            +DP+ TERSMQ+IW  +H KL +     + +  V+ A +S+W+FLL  ++ W++ PK++
Sbjct: 166 GNDPEQTERSMQIIWQMIHPKLGSNVVATKPSPAVISAVVSSWAFLLTTVDRWTLGPKIF 225

Query: 174 NESIPYLFNLLDESDPSVRMVAGETLALIIEIGVIEKFS 58
            E++ YL  LL++ D SVR+ AGE LA+I E+G +EKF+
Sbjct: 226 QETVTYLSTLLEKDDRSVRIAAGEALAVIYELGTLEKFA 264


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