BLASTX nr result

ID: Coptis21_contig00027354 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00027354
         (491 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268514.1| PREDICTED: uncharacterized protein LOC100245...   161   6e-38
ref|XP_002278038.2| PREDICTED: uncharacterized protein LOC100244...   153   1e-35
emb|CAN74734.1| hypothetical protein VITISV_044234 [Vitis vinifera]   153   1e-35
ref|XP_002297893.1| predicted protein [Populus trichocarpa] gi|2...   150   1e-34
ref|XP_002338292.1| predicted protein [Populus trichocarpa] gi|2...   149   3e-34

>ref|XP_002268514.1| PREDICTED: uncharacterized protein LOC100245456 [Vitis vinifera]
          Length = 292

 Score =  161 bits (407), Expect = 6e-38
 Identities = 77/142 (54%), Positives = 104/142 (73%), Gaps = 3/142 (2%)
 Frame = +2

Query: 53  SMEVKVMCCKDIKAFNFFQKLSIYSSVSIVSTRKDTSKTQTPPQ---RHKTPIDREGKEN 223
           SME+KV+ CK +KAFNFFQKL +Y+ VSI+S     S  +   Q   R KTP+DR+G  N
Sbjct: 6   SMELKVISCKHLKAFNFFQKLVVYAVVSIISDESKNSNQKHQIQCLQRQKTPVDRDGNGN 65

Query: 224 PEWNHLIQLDLSALHLDNQHDLFLEFDMLCDSAIFGDKSIGQVRVPIKELIEECNGTVRY 403
           PEWNH +Q DL  + L +  + +++F + C+  +FG+K+IG+V VP+KELI+E N  VR+
Sbjct: 66  PEWNHQLQFDLRDISLADSANYYVKFSLRCEGIVFGNKTIGEVCVPLKELIDEFNRAVRF 125

Query: 404 VSYQVMTTDGKPNGVLDFSYKV 469
           VSYQV TTDGKPNGVL+FSYK+
Sbjct: 126 VSYQVRTTDGKPNGVLNFSYKL 147


>ref|XP_002278038.2| PREDICTED: uncharacterized protein LOC100244618 [Vitis vinifera]
          Length = 1154

 Score =  153 bits (387), Expect = 1e-35
 Identities = 75/149 (50%), Positives = 107/149 (71%), Gaps = 3/149 (2%)
 Frame = +2

Query: 53   SMEVKVMCCKDIKAFNFFQKLSIYSSVSIVSTRKDTSKTQTPPQRHKTPIDREGKENPEW 232
            S++VKVM CKD++AFNFFQKLS+Y+ VS+VS   D        Q+ +TP D+EG  NPEW
Sbjct: 887  SIQVKVMSCKDLRAFNFFQKLSVYAIVSLVSDDPDQKLEPHHQQQQRTPADKEGDGNPEW 946

Query: 233  NHLIQLDLSALHLDNQHDLFLEFDMLCDSAIF--GDKSIGQVRVPIKELIE-ECNGTVRY 403
            NHL++ +L  +     H LF+ FD+ C+  +F  GDK++G+VRVP+ +LI+ + NG +R+
Sbjct: 947  NHLMEFNL--IEGFGLHHLFIHFDLRCEGLVFGIGDKALGEVRVPLDDLIQPDSNGIMRF 1004

Query: 404  VSYQVMTTDGKPNGVLDFSYKVIDDQFNK 490
            VSYQV + DGKPNGVL+FSYK + ++  K
Sbjct: 1005 VSYQVRSGDGKPNGVLNFSYKAVMNEMGK 1033


>emb|CAN74734.1| hypothetical protein VITISV_044234 [Vitis vinifera]
          Length = 276

 Score =  153 bits (387), Expect = 1e-35
 Identities = 75/149 (50%), Positives = 107/149 (71%), Gaps = 3/149 (2%)
 Frame = +2

Query: 53  SMEVKVMCCKDIKAFNFFQKLSIYSSVSIVSTRKDTSKTQTPPQRHKTPIDREGKENPEW 232
           S++VKVM CKD++AFNFFQKLS+Y+ VS+VS   D        Q+ +TP D+EG  NPEW
Sbjct: 9   SIQVKVMSCKDLRAFNFFQKLSVYAIVSLVSDDPDQKLEPHHQQQQRTPADKEGDGNPEW 68

Query: 233 NHLIQLDLSALHLDNQHDLFLEFDMLCDSAIF--GDKSIGQVRVPIKELIE-ECNGTVRY 403
           NHL++ +L  +     H LF+ FD+ C+  +F  GDK++G+VRVP+ +LI+ + NG +R+
Sbjct: 69  NHLMEFNL--IEGFGLHHLFIHFDLRCEGLVFGIGDKALGEVRVPLDDLIQPDSNGIMRF 126

Query: 404 VSYQVMTTDGKPNGVLDFSYKVIDDQFNK 490
           VSYQV + DGKPNGVL+FSYK + ++  K
Sbjct: 127 VSYQVRSGDGKPNGVLNFSYKAVMNEMGK 155


>ref|XP_002297893.1| predicted protein [Populus trichocarpa] gi|222845151|gb|EEE82698.1|
           predicted protein [Populus trichocarpa]
          Length = 350

 Score =  150 bits (378), Expect = 1e-34
 Identities = 85/194 (43%), Positives = 115/194 (59%), Gaps = 41/194 (21%)
 Frame = +2

Query: 11  TSQQERNSTIMAPTSMEVKVMCCKDIKAFNFFQKLSIYSSVSIVS--TRKDTSKTQ---- 172
           +S +++    M   S+E+KV+ C+D+KAFNFFQKLS+Y  VS+ +   RK+  + Q    
Sbjct: 17  SSVEKKAEHTMEGVSLELKVISCRDLKAFNFFQKLSVYVVVSVFNDEPRKNEQQRQKTAV 76

Query: 173 ---------------------TP-------------PQRHKTPIDREGKENPEWNHLIQL 250
                                TP              QR KTP DREG  NPEWNH+++ 
Sbjct: 77  DFLSCVLKKNEKQRQRLQGQKTPLNDEAQKNEQQQLLQRQKTPADREGGSNPEWNHMMEF 136

Query: 251 DLSALHLDNQHD-LFLEFDMLCDSAIFGDKSIGQVRVPIKELIEECNGTVRYVSYQVMTT 427
           DL+   L    D LF +F++ C+ AIFG+KSIG+V VP K+LIEE NG+VR+VSYQV  +
Sbjct: 137 DLNTTSLPGHGDHLFFKFELRCEGAIFGNKSIGEVCVPFKDLIEEFNGSVRFVSYQVRNS 196

Query: 428 DGKPNGVLDFSYKV 469
           DGKPNGVL+ SY+V
Sbjct: 197 DGKPNGVLNLSYEV 210


>ref|XP_002338292.1| predicted protein [Populus trichocarpa] gi|222871748|gb|EEF08879.1|
           predicted protein [Populus trichocarpa]
          Length = 311

 Score =  149 bits (375), Expect = 3e-34
 Identities = 73/143 (51%), Positives = 96/143 (67%), Gaps = 4/143 (2%)
 Frame = +2

Query: 53  SMEVKVMCCKDIKAFNFFQKLSIYSSVSIVSTR----KDTSKTQTPPQRHKTPIDREGKE 220
           SME+KVM CKD+ +FNFF+KL +Y  VSIV        D  + +   Q+ +TP D EG  
Sbjct: 5   SMELKVMYCKDVNSFNFFKKLLVYVLVSIVKDDGGDDSDKKQLELQKQQQRTPTDTEGDG 64

Query: 221 NPEWNHLIQLDLSALHLDNQHDLFLEFDMLCDSAIFGDKSIGQVRVPIKELIEECNGTVR 400
           NPEWNH +  DL+ +   +    F+ FD+  +   FGDK+IG+VRVP+K+LIEE NG VR
Sbjct: 65  NPEWNHQMHFDLAEVSFQDCDHFFIHFDLCHEGLYFGDKTIGKVRVPLKDLIEEANGIVR 124

Query: 401 YVSYQVMTTDGKPNGVLDFSYKV 469
           ++SY+V T DGKPNGVL FS KV
Sbjct: 125 FLSYEVRTPDGKPNGVLKFSCKV 147


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