BLASTX nr result

ID: Coptis21_contig00027349 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00027349
         (580 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281519.2| PREDICTED: uncharacterized protein LOC100248...   263   1e-68
emb|CAN66786.1| hypothetical protein VITISV_037767 [Vitis vinifera]   263   1e-68
ref|XP_002534730.1| protein binding protein, putative [Ricinus c...   258   5e-67
ref|XP_002313454.1| predicted protein [Populus trichocarpa] gi|2...   241   6e-62
emb|CBI32662.3| unnamed protein product [Vitis vinifera]              237   1e-60

>ref|XP_002281519.2| PREDICTED: uncharacterized protein LOC100248374 [Vitis vinifera]
          Length = 621

 Score =  263 bits (673), Expect = 1e-68
 Identities = 124/195 (63%), Positives = 160/195 (82%), Gaps = 2/195 (1%)
 Frame = -2

Query: 579 SSKSPVPGGGVHPLTRYVMNYICFLSDYTGILSDITADWPLPEQTSLPDSDYES--AEEF 406
           SSK+P+ GGGVHPLTRYVMNY+ FLSDY+G+LS I A+WPL  Q+S+P+S +E+  +++ 
Sbjct: 358 SSKTPIRGGGVHPLTRYVMNYVSFLSDYSGVLSVIVAEWPLTVQSSMPESYFENPKSDDD 417

Query: 405 PTSAMAIRLAWXXXXXLCKLDGKTEHYKDVSLSYLFLANNLNYVISKVRSSNLKFLLGED 226
           PTSA+++RLAW     LCKLDG+ + YKDVSLSY+FLANNL YV +KVR+SN+++LLG+D
Sbjct: 418 PTSAISLRLAWLVLVLLCKLDGRAKLYKDVSLSYIFLANNLQYVTTKVRTSNIRYLLGDD 477

Query: 225 WISKHELKVIQYCDNYERMGWSKVISSIPENPTTALSLEEVKVYFQSFNSAFETAYRTQS 46
           WI+KHE+KV QY  NYERMGWSKV SS+PENP+  +S E+ K  F+ FNSAFE  YR Q+
Sbjct: 478 WIAKHEIKVKQYASNYERMGWSKVFSSLPENPSADISPEKAKECFKKFNSAFEEVYRKQT 537

Query: 45  SWVVSDGKLRDEIKL 1
           SWVV D KL++EIKL
Sbjct: 538 SWVVPDNKLQEEIKL 552


>emb|CAN66786.1| hypothetical protein VITISV_037767 [Vitis vinifera]
          Length = 621

 Score =  263 bits (673), Expect = 1e-68
 Identities = 124/195 (63%), Positives = 160/195 (82%), Gaps = 2/195 (1%)
 Frame = -2

Query: 579 SSKSPVPGGGVHPLTRYVMNYICFLSDYTGILSDITADWPLPEQTSLPDSDYES--AEEF 406
           SSK+P+ GGGVHPLTRYVMNY+ FLSDY+G+LS I A+WPL  Q+S+P+S +E+  +++ 
Sbjct: 358 SSKTPIRGGGVHPLTRYVMNYVSFLSDYSGVLSVIVAEWPLTVQSSMPESYFENPKSDDD 417

Query: 405 PTSAMAIRLAWXXXXXLCKLDGKTEHYKDVSLSYLFLANNLNYVISKVRSSNLKFLLGED 226
           PTSA+++RLAW     LCKLDG+ + YKDVSLSY+FLANNL YV +KVR+SN+++LLG+D
Sbjct: 418 PTSAISLRLAWLVLVLLCKLDGRAKLYKDVSLSYIFLANNLQYVTTKVRTSNIRYLLGDD 477

Query: 225 WISKHELKVIQYCDNYERMGWSKVISSIPENPTTALSLEEVKVYFQSFNSAFETAYRTQS 46
           WI+KHE+KV QY  NYERMGWSKV SS+PENP+  +S E+ K  F+ FNSAFE  YR Q+
Sbjct: 478 WIAKHEIKVKQYASNYERMGWSKVFSSLPENPSADISPEKAKECFKKFNSAFEEVYRKQT 537

Query: 45  SWVVSDGKLRDEIKL 1
           SWVV D KL++EIKL
Sbjct: 538 SWVVPDNKLQEEIKL 552


>ref|XP_002534730.1| protein binding protein, putative [Ricinus communis]
           gi|223524670|gb|EEF27653.1| protein binding protein,
           putative [Ricinus communis]
          Length = 630

 Score =  258 bits (659), Expect = 5e-67
 Identities = 125/195 (64%), Positives = 153/195 (78%), Gaps = 2/195 (1%)
 Frame = -2

Query: 579 SSKSPVPGGGVHPLTRYVMNYICFLSDYTGILSDITADWPLPEQTSLPDSDYESAE--EF 406
           +SK+PVPG GVHPLTRYVMNYI FL+DY+G+LSDI ADWPL  Q+ LP+S + S E  + 
Sbjct: 364 NSKTPVPGAGVHPLTRYVMNYIAFLADYSGVLSDIVADWPLTSQSPLPESYFGSPEHEDG 423

Query: 405 PTSAMAIRLAWXXXXXLCKLDGKTEHYKDVSLSYLFLANNLNYVISKVRSSNLKFLLGED 226
             +A+++RLAW     LCKLDGK E YKDV+ SYLFLANNL YV+SKVR+S+LKFL+G+D
Sbjct: 424 AATAISVRLAWLILVLLCKLDGKAELYKDVAQSYLFLANNLQYVVSKVRTSSLKFLIGDD 483

Query: 225 WISKHELKVIQYCDNYERMGWSKVISSIPENPTTALSLEEVKVYFQSFNSAFETAYRTQS 46
           WI KHE KV QY  NYERMGWSKVI+S+PE+ T A+++  V   F+ FN AFE  Y+ QS
Sbjct: 484 WIRKHEAKVRQYAQNYERMGWSKVIASLPEDSTAAMTVNSVAERFKRFNLAFEDTYKKQS 543

Query: 45  SWVVSDGKLRDEIKL 1
           SWVV D KLRDEIK+
Sbjct: 544 SWVVPDAKLRDEIKV 558


>ref|XP_002313454.1| predicted protein [Populus trichocarpa] gi|222849862|gb|EEE87409.1|
           predicted protein [Populus trichocarpa]
          Length = 597

 Score =  241 bits (615), Expect = 6e-62
 Identities = 116/196 (59%), Positives = 150/196 (76%), Gaps = 3/196 (1%)
 Frame = -2

Query: 579 SSKSPVPGGGVHPLTRYVMNYICFLSDYTGILSDITADWPLPEQTSLPDSDYES---AEE 409
           +SK+ VPGGG+HPLTRYVMNYI FL+DY+G+L+DI ADWPL   + LP++ + S   A+ 
Sbjct: 325 NSKAAVPGGGIHPLTRYVMNYITFLTDYSGVLTDILADWPLTVPSPLPEAYFGSPVSADG 384

Query: 408 FPTSAMAIRLAWXXXXXLCKLDGKTEHYKDVSLSYLFLANNLNYVISKVRSSNLKFLLGE 229
             TS+++IRLAW     LCKLDGK E YKDV+LSYLFLANNL YV++KV+ SNLK LLG+
Sbjct: 385 TSTSSISIRLAWLILVMLCKLDGKAEMYKDVALSYLFLANNLQYVVNKVQKSNLKLLLGD 444

Query: 228 DWISKHELKVIQYCDNYERMGWSKVISSIPENPTTALSLEEVKVYFQSFNSAFETAYRTQ 49
           +W+ KHE KV QY  NYERMGWSKV +++P+     ++  +V   F+ FNS+FE AY  Q
Sbjct: 445 EWMEKHEEKVRQYASNYERMGWSKVFAALPDANDNQMTAPQVTECFKRFNSSFEEAYNNQ 504

Query: 48  SSWVVSDGKLRDEIKL 1
           +SWVVSD KLRD+IK+
Sbjct: 505 ASWVVSDSKLRDQIKV 520


>emb|CBI32662.3| unnamed protein product [Vitis vinifera]
          Length = 687

 Score =  237 bits (604), Expect = 1e-60
 Identities = 117/194 (60%), Positives = 147/194 (75%), Gaps = 2/194 (1%)
 Frame = -2

Query: 579  SSKSPVPGGGVHPLTRYVMNYICFLSDYTGILSDITADWPLPEQTSLPDSDYESAE--EF 406
            SSKSPV GGG+HPLT+YVMNY+  L+DY+ IL DI  D P P Q+ LP+  +ES++    
Sbjct: 430  SSKSPVAGGGLHPLTQYVMNYLSHLADYSSILGDIIGDSPPPVQSPLPEFYFESSDTDNT 489

Query: 405  PTSAMAIRLAWXXXXXLCKLDGKTEHYKDVSLSYLFLANNLNYVISKVRSSNLKFLLGED 226
            P  A+++RLAW     LCKLDGK + YK+VSLSYLFLANNL +V+SKVR+SNL++LLG++
Sbjct: 490  PAPAISVRLAWIILFLLCKLDGKAKQYKEVSLSYLFLANNLQHVVSKVRTSNLRYLLGDE 549

Query: 225  WISKHELKVIQYCDNYERMGWSKVISSIPENPTTALSLEEVKVYFQSFNSAFETAYRTQS 46
            WIS HE K+ Q+  NYER+GW  VISS+PENP  A+S EE K  F+ FN  FE AYR QS
Sbjct: 550  WISMHESKLRQFAANYERLGWGHVISSMPENPKAAISPEEAKETFRKFNLEFEQAYRKQS 609

Query: 45   SWVVSDGKLRDEIK 4
            S++V D KLRDEIK
Sbjct: 610  SYIVPDPKLRDEIK 623


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