BLASTX nr result

ID: Coptis21_contig00027348 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00027348
         (322 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633735.1| PREDICTED: LOW QUALITY PROTEIN: probable dis...    70   2e-10
ref|XP_002522629.1| Disease resistance protein RPS5, putative [R...    68   7e-10
ref|XP_002269288.2| PREDICTED: disease resistance protein At4g27...    64   1e-08
emb|CBI35155.3| unnamed protein product [Vitis vinifera]               64   1e-08
emb|CBI35154.3| unnamed protein product [Vitis vinifera]               64   1e-08

>ref|XP_003633735.1| PREDICTED: LOW QUALITY PROTEIN: probable disease resistance protein
           At1g61310-like [Vitis vinifera]
          Length = 1340

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 44/107 (41%), Positives = 62/107 (57%), Gaps = 8/107 (7%)
 Frame = +3

Query: 6   KLIRDVDTFEEAKNRLEATVDQLTSAGLLLEGYYGRIM-LHDVVRDVAVSIAREERNEFI 182
           +L +  +T EEAKNR+E  VD L ++ LLLE  Y  +  +HDVV++VA+ IA +E + F 
Sbjct: 428 RLFQGTNTLEEAKNRIETLVDNLKASNLLLETRYNAVFRMHDVVQNVAIEIASKEHHVFT 487

Query: 183 VKAKMSFNEWPNM-ELEKCKRLSLMDTKIRSPLP------SQIKAPN 302
            +  +   EWPNM EL+K   + L    IR  LP      S +K PN
Sbjct: 488 FQTGVRMEEWPNMDELQKFTMIYLDCCDIRE-LPEGLNHNSSLKIPN 533


>ref|XP_002522629.1| Disease resistance protein RPS5, putative [Ricinus communis]
           gi|223538105|gb|EEF39716.1| Disease resistance protein
           RPS5, putative [Ricinus communis]
          Length = 1603

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 39/101 (38%), Positives = 59/101 (58%), Gaps = 2/101 (1%)
 Frame = +3

Query: 9   LIRDVDTFEEAKNRLEATVDQLTSAGLLLEG-YYGRIMLHDVVRDVAVSIAREERNEFIV 185
           L + +DT  +A+NR+   +  L +A LLL+    GR+ +HDVVRDVA+SIA   ++ F V
Sbjct: 428 LFKGIDTLGDARNRVHKLISDLKAACLLLDSDIKGRVKIHDVVRDVAISIASRMQHLFTV 487

Query: 186 KAKMSFNEWPNMEL-EKCKRLSLMDTKIRSPLPSQIKAPNL 305
           +      EWPN ++ + C R+SL    I   LP  ++ P L
Sbjct: 488 RNGALLKEWPNKDVCKSCTRISLPYNDIHG-LPEVLECPEL 527


>ref|XP_002269288.2| PREDICTED: disease resistance protein At4g27190-like [Vitis
           vinifera]
          Length = 1520

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 39/102 (38%), Positives = 61/102 (59%), Gaps = 2/102 (1%)
 Frame = +3

Query: 6   KLIRDVDTFEEAKNRLEATVDQLTSAGLLLE-GYYGRIMLHDVVRDVAVSIAREERNEFI 182
           +L +  +T EEAKNR++  VD L ++ LLL+ G+   + +HDVVRDVA++I  +    F 
Sbjct: 428 RLFQGTNTLEEAKNRIDTLVDSLKASKLLLDTGHNSFVRMHDVVRDVAIAIVSKVHRVFS 487

Query: 183 VKAKMSFNEWPNM-ELEKCKRLSLMDTKIRSPLPSQIKAPNL 305
           ++ +    EWP M EL+ C ++SL    I   LP ++  P L
Sbjct: 488 LR-EDELVEWPKMDELQTCTKMSLAYNDI-CELPIELVCPEL 527


>emb|CBI35155.3| unnamed protein product [Vitis vinifera]
          Length = 1152

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 39/102 (38%), Positives = 61/102 (59%), Gaps = 2/102 (1%)
 Frame = +3

Query: 6   KLIRDVDTFEEAKNRLEATVDQLTSAGLLLE-GYYGRIMLHDVVRDVAVSIAREERNEFI 182
           +L +  +T EEAKNR++  VD L ++ LLL+ G+   + +HDVVRDVA++I  +    F 
Sbjct: 248 RLFQGTNTLEEAKNRIDTLVDSLKASKLLLDTGHNSFVRMHDVVRDVAIAIVSKVHRVFS 307

Query: 183 VKAKMSFNEWPNM-ELEKCKRLSLMDTKIRSPLPSQIKAPNL 305
           ++ +    EWP M EL+ C ++SL    I   LP ++  P L
Sbjct: 308 LR-EDELVEWPKMDELQTCTKMSLAYNDI-CELPIELVCPEL 347


>emb|CBI35154.3| unnamed protein product [Vitis vinifera]
          Length = 331

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 38/105 (36%), Positives = 64/105 (60%), Gaps = 2/105 (1%)
 Frame = +3

Query: 6   KLIRDVDTFEEAKNRLEATVDQLTSAGLLLE-GYYGRIMLHDVVRDVAVSIAREERNEFI 182
           +L +  DT E+ +NR+E  VD L ++ LLLE G    + +HDVVRDVA++IA ++ + F 
Sbjct: 4   RLFQGTDTLEDTRNRVETLVDNLKASNLLLETGDNAFMRMHDVVRDVALAIASKD-HVFS 62

Query: 183 VKAKMSFNEWPNM-ELEKCKRLSLMDTKIRSPLPSQIKAPNLLTL 314
           ++  +   EWP + EL++C ++SL    I   LP  ++  +  +L
Sbjct: 63  LREGVGLEEWPKLDELQRCSKISLPYNDI-CKLPEGLRCSDAFSL 106


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