BLASTX nr result

ID: Coptis21_contig00027323 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00027323
         (299 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279710.1| PREDICTED: uncharacterized protein LOC100255...   141   5e-32
ref|XP_002444420.1| hypothetical protein SORBIDRAFT_07g021670 [S...   135   3e-30
ref|XP_003574537.1| PREDICTED: uncharacterized protein LOC100833...   131   5e-29
ref|XP_003519142.1| PREDICTED: uncharacterized protein LOC100780...   130   1e-28
dbj|BAJ86241.1| predicted protein [Hordeum vulgare subsp. vulgare]    130   1e-28

>ref|XP_002279710.1| PREDICTED: uncharacterized protein LOC100255296 [Vitis vinifera]
           gi|297743631|emb|CBI36514.3| unnamed protein product
           [Vitis vinifera]
          Length = 101

 Score =  141 bits (356), Expect = 5e-32
 Identities = 61/93 (65%), Positives = 79/93 (84%)
 Frame = +1

Query: 19  SAVSSDKVYVDVLAQGRTACYKARDAFYTCIEKQSNKKASEVGYVGLLYPVECKKSRELY 198
           ++ + + ++ DVL++ R ACYKARDAFY C+EK+SNKK +E+  VGLLYPVECK+SR  Y
Sbjct: 7   ASTNPNTIHTDVLSEARQACYKARDAFYACLEKESNKKPTEIASVGLLYPVECKESRAQY 66

Query: 199 VKQCRPTWVKHFDRQHCSKRRVHRLLDNDEARR 297
           V QCRPTWVKHFDRQ+CSK+RV RLLD++E+RR
Sbjct: 67  VSQCRPTWVKHFDRQYCSKKRVQRLLDDNESRR 99


>ref|XP_002444420.1| hypothetical protein SORBIDRAFT_07g021670 [Sorghum bicolor]
           gi|241940770|gb|EES13915.1| hypothetical protein
           SORBIDRAFT_07g021670 [Sorghum bicolor]
          Length = 116

 Score =  135 bits (341), Expect = 3e-30
 Identities = 61/90 (67%), Positives = 71/90 (78%)
 Frame = +1

Query: 28  SSDKVYVDVLAQGRTACYKARDAFYTCIEKQSNKKASEVGYVGLLYPVECKKSRELYVKQ 207
           S   V  DVLA+GR ACYKARDAFY C+EK ++KK +E+  +GLLYP +CKKSR  YV  
Sbjct: 14  SDGSVMPDVLAKGREACYKARDAFYACVEKHADKKPTEIATMGLLYPADCKKSRANYVSN 73

Query: 208 CRPTWVKHFDRQHCSKRRVHRLLDNDEARR 297
           CRPTWVKHFDRQ+CSK+RV RLLD DE RR
Sbjct: 74  CRPTWVKHFDRQYCSKKRVQRLLDGDEDRR 103


>ref|XP_003574537.1| PREDICTED: uncharacterized protein LOC100833101 [Brachypodium
           distachyon]
          Length = 116

 Score =  131 bits (330), Expect = 5e-29
 Identities = 55/86 (63%), Positives = 70/86 (81%)
 Frame = +1

Query: 40  VYVDVLAQGRTACYKARDAFYTCIEKQSNKKASEVGYVGLLYPVECKKSRELYVKQCRPT 219
           +  DVL++GR +CYKARDAFY C+EK ++KK +E+  +GLLYP +CKKSR  YV  CRP+
Sbjct: 18  IMADVLSKGRESCYKARDAFYACVEKHADKKPTEIATMGLLYPADCKKSRAQYVNSCRPS 77

Query: 220 WVKHFDRQHCSKRRVHRLLDNDEARR 297
           WVKHFDRQHC+K+RV RLLD D+ RR
Sbjct: 78  WVKHFDRQHCAKKRVQRLLDGDDDRR 103


>ref|XP_003519142.1| PREDICTED: uncharacterized protein LOC100780570 [Glycine max]
          Length = 101

 Score =  130 bits (327), Expect = 1e-28
 Identities = 56/93 (60%), Positives = 74/93 (79%)
 Frame = +1

Query: 19  SAVSSDKVYVDVLAQGRTACYKARDAFYTCIEKQSNKKASEVGYVGLLYPVECKKSRELY 198
           +A + DK++ DVL + R +CYKARDAFY C+EK+S+KK +E+  VGLLYP+ECK+ R  Y
Sbjct: 7   AAANPDKIHTDVLTKARDSCYKARDAFYACLEKESDKKPTEIASVGLLYPLECKECRNEY 66

Query: 199 VKQCRPTWVKHFDRQHCSKRRVHRLLDNDEARR 297
           VKQCR +WVKHFDRQ+C  +RV RLLD+  +RR
Sbjct: 67  VKQCRSSWVKHFDRQYCQNKRVQRLLDDKGSRR 99


>dbj|BAJ86241.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 116

 Score =  130 bits (326), Expect = 1e-28
 Identities = 58/103 (56%), Positives = 75/103 (72%), Gaps = 5/103 (4%)
 Frame = +1

Query: 4   PSTMESAVSSDK-----VYVDVLAQGRTACYKARDAFYTCIEKQSNKKASEVGYVGLLYP 168
           PS  + A  SD      +  DVL++GR +CYKARDAFY C+EK ++KK +E+  +GLLYP
Sbjct: 1   PSAPDPAPDSDHCDAGTIMADVLSKGRESCYKARDAFYACVEKHADKKPTEIATMGLLYP 60

Query: 169 VECKKSRELYVKQCRPTWVKHFDRQHCSKRRVHRLLDNDEARR 297
            +CKKSR  YV  CRP+WV+HFDRQHC+K+RV RLLD D+  R
Sbjct: 61  ADCKKSRAQYVSSCRPSWVRHFDRQHCAKKRVQRLLDGDDEGR 103


Top